Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.62□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.62□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.62□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trbv13-3A0A0B4J1H2 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.61□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC12.61□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv13-3A0A0B4J1H2 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.6□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.6□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv13-3A0A0B4J1H2 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.6□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC12.6□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Rab3c-203ENSMUST00000224180 967 ntBASIC12.6□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-3A0A0B4J1H2 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC12.59□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-3A0A0B4J1H2 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC12.59□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.59□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Alkbh1-212ENSMUST00000185301 408 ntBASIC12.59□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Gm42642-201ENSMUST00000200683 355 ntBASIC12.59□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Gm5874-201ENSMUST00000096101 508 ntBASIC12.59□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.59□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms