Protein–RNA interactions for Protein: A0A075B642

Trav10, T cell receptor alpha variable 10 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10A0A075B642 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav10A0A075B642 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav10A0A075B642 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav10A0A075B642 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Trav10A0A075B642 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.34□□□□□ -0.11
Trav10A0A075B642 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav10A0A075B642 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.34□□□□□ -0.11
Trav10A0A075B642 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav10A0A075B642 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav10A0A075B642 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav10A0A075B642 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.34□□□□□ -0.11
Trav10A0A075B642 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.34□□□□□ -0.11
Trav10A0A075B642 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav10A0A075B642 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav10A0A075B642 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav10A0A075B642 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav10A0A075B642 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav10A0A075B642 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav10A0A075B642 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav10A0A075B642 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav10A0A075B642 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav10A0A075B642 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav10A0A075B642 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Trav10A0A075B642 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav10A0A075B642 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav10A0A075B642 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav10A0A075B642 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav10A0A075B642 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav10A0A075B642 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav10A0A075B642 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav10A0A075B642 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
Trav10A0A075B642 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Trav10A0A075B642 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.33□□□□□ -0.11
Trav10A0A075B642 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav10A0A075B642 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav10A0A075B642 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav10A0A075B642 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav10A0A075B642 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav10A0A075B642 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav10A0A075B642 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav10A0A075B642 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trav10A0A075B642 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.33□□□□□ -0.11
Trav10A0A075B642 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav10A0A075B642 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav10A0A075B642 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav10A0A075B642 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav10A0A075B642 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav10A0A075B642 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav10A0A075B642 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav10A0A075B642 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.33□□□□□ -0.12
Trav10A0A075B642 Gm6345-202ENSMUST00000180900 204 ntBASIC14.33□□□□□ -0.12
Trav10A0A075B642 Gm36967-201ENSMUST00000193814 266 ntBASIC14.33□□□□□ -0.12
Trav10A0A075B642 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.33□□□□□ -0.12
Trav10A0A075B642 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trav10A0A075B642 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Trav10A0A075B642 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav10A0A075B642 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav10A0A075B642 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav10A0A075B642 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav10A0A075B642 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav10A0A075B642 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trav10A0A075B642 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav10A0A075B642 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trav10A0A075B642 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trav10A0A075B642 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav10A0A075B642 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav10A0A075B642 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trav10A0A075B642 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trav10A0A075B642 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav10A0A075B642 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav10A0A075B642 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav10A0A075B642 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav10A0A075B642 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav10A0A075B642 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav10A0A075B642 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav10A0A075B642 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav10A0A075B642 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav10A0A075B642 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav10A0A075B642 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav10A0A075B642 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav10A0A075B642 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav10A0A075B642 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav10A0A075B642 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav10A0A075B642 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav10A0A075B642 AA414768-201ENSMUST00000121924 1257 ntBASIC14.32□□□□□ -0.12
Trav10A0A075B642 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav10A0A075B642 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav10A0A075B642 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav10A0A075B642 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trav10A0A075B642 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav10A0A075B642 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav10A0A075B642 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav10A0A075B642 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav10A0A075B642 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav10A0A075B642 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav10A0A075B642 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav10A0A075B642 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav10A0A075B642 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trav10A0A075B642 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav10A0A075B642 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms