Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 RNA5SP99-201ENST00000364020 114 ntBASIC1.34□□□□□ -2.19
COMMD3-BMI1R4GMX3 SNORD32B-201ENST00000364460 84 ntBASIC1.34□□□□□ -2.19
COMMD3-BMI1R4GMX3 RNU6-434P-201ENST00000384376 107 ntBASIC1.34□□□□□ -2.19
COMMD3-BMI1R4GMX3 RNU6-606P-201ENST00000384721 111 ntBASIC1.34□□□□□ -2.19
COMMD3-BMI1R4GMX3 PIGFP2-201ENST00000421400 651 ntBASIC1.34□□□□□ -2.19
COMMD3-BMI1R4GMX3 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC1.34□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC078809.1-201ENST00000427601 140 ntBASIC1.34□□□□□ -2.19
COMMD3-BMI1R4GMX3 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.34□□□□□ -2.19
COMMD3-BMI1R4GMX3 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.34□□□□□ -2.19
COMMD3-BMI1R4GMX3 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.34□□□□□ -2.19
COMMD3-BMI1R4GMX3 KATNBL1P3-201ENST00000443475 909 ntBASIC1.34□□□□□ -2.19
COMMD3-BMI1R4GMX3 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.34□□□□□ -2.19
COMMD3-BMI1R4GMX3 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.34□□□□□ -2.19
COMMD3-BMI1R4GMX3 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.34□□□□□ -2.19
COMMD3-BMI1R4GMX3 MTND3P5-201ENST00000512798 333 ntBASIC1.34□□□□□ -2.19
COMMD3-BMI1R4GMX3 RNA5SP490-201ENST00000517141 136 ntBASIC1.34□□□□□ -2.19
COMMD3-BMI1R4GMX3 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.34□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.34□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC091805.2-201ENST00000603848 235 ntBASIC1.34□□□□□ -2.19
COMMD3-BMI1R4GMX3 AL034555.1-201ENST00000604816 211 ntBASIC1.34□□□□□ -2.19
COMMD3-BMI1R4GMX3 BNIP3P10-201ENST00000605360 577 ntBASIC1.34□□□□□ -2.19
COMMD3-BMI1R4GMX3 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.34□□□□□ -2.19
COMMD3-BMI1R4GMX3 AC022418.1-201ENST00000624118 445 ntBASIC1.34□□□□□ -2.19
COMMD3-BMI1R4GMX3 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
COMMD3-BMI1R4GMX3 U3.4-201ENST00000363352 213 ntBASIC1.33□□□□□ -2.2
COMMD3-BMI1R4GMX3 RNU6-715P-201ENST00000365204 103 ntBASIC1.33□□□□□ -2.2
COMMD3-BMI1R4GMX3 MIR758-201ENST00000390227 88 ntBASIC1.33□□□□□ -2.2
COMMD3-BMI1R4GMX3 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.33□□□□□ -2.2
COMMD3-BMI1R4GMX3 RPS29P13-201ENST00000402041 169 ntBASIC1.33□□□□□ -2.2
COMMD3-BMI1R4GMX3 RN7SKP61-201ENST00000410642 295 ntBASIC1.33□□□□□ -2.2
COMMD3-BMI1R4GMX3 AL669831.1-202ENST00000428504 417 ntBASIC1.33□□□□□ -2.2
COMMD3-BMI1R4GMX3 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.33□□□□□ -2.2
COMMD3-BMI1R4GMX3 GTF2IP13-201ENST00000438487 386 ntBASIC1.33□□□□□ -2.2
COMMD3-BMI1R4GMX3 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.33□□□□□ -2.2
COMMD3-BMI1R4GMX3 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.33□□□□□ -2.2
COMMD3-BMI1R4GMX3 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.33□□□□□ -2.2
COMMD3-BMI1R4GMX3 RPL31P58-201ENST00000469001 379 ntBASIC1.33□□□□□ -2.2
COMMD3-BMI1R4GMX3 RPS26P55-201ENST00000471178 356 ntBASIC1.33□□□□□ -2.2
COMMD3-BMI1R4GMX3 AC079382.1-201ENST00000493346 557 ntBASIC1.33□□□□□ -2.2
COMMD3-BMI1R4GMX3 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.33□□□□□ -2.2
COMMD3-BMI1R4GMX3 MTCO3P23-201ENST00000561363 289 ntBASIC1.33□□□□□ -2.2
COMMD3-BMI1R4GMX3 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.33□□□□□ -2.2
COMMD3-BMI1R4GMX3 MIR548AB-201ENST00000584917 84 ntBASIC1.33□□□□□ -2.2
COMMD3-BMI1R4GMX3 MIR98-201ENST00000606724 119 ntBASIC1.33□□□□□ -2.2
COMMD3-BMI1R4GMX3 AC109347.2-201ENST00000610220 349 ntBASIC1.33□□□□□ -2.2
COMMD3-BMI1R4GMX3 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
COMMD3-BMI1R4GMX3 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
COMMD3-BMI1R4GMX3 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
COMMD3-BMI1R4GMX3 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.33□□□□□ -2.2
COMMD3-BMI1R4GMX3 AC245060.5-201ENST00000610778 3293 ntBASIC1.33□□□□□ -2.2
COMMD3-BMI1R4GMX3 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
COMMD3-BMI1R4GMX3 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
COMMD3-BMI1R4GMX3 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
COMMD3-BMI1R4GMX3 AC092268.1-201ENST00000342691 405 ntBASIC1.32□□□□□ -2.2
COMMD3-BMI1R4GMX3 RNU4-21P-201ENST00000362802 126 ntBASIC1.32□□□□□ -2.2
COMMD3-BMI1R4GMX3 MIR517C-201ENST00000385103 95 ntBASIC1.32□□□□□ -2.2
COMMD3-BMI1R4GMX3 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.32□□□□□ -2.2
COMMD3-BMI1R4GMX3 ISCA1P6-201ENST00000427740 390 ntBASIC1.32□□□□□ -2.2
COMMD3-BMI1R4GMX3 AC243964.1-201ENST00000441814 261 ntBASIC1.32□□□□□ -2.2
COMMD3-BMI1R4GMX3 MTCYBP1-201ENST00000454315 1119 ntBASIC1.32□□□□□ -2.2
COMMD3-BMI1R4GMX3 Y_RNA.638-201ENST00000459374 113 ntBASIC1.32□□□□□ -2.2
COMMD3-BMI1R4GMX3 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.32□□□□□ -2.2
COMMD3-BMI1R4GMX3 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.32□□□□□ -2.2
COMMD3-BMI1R4GMX3 MTCO3P7-201ENST00000510008 774 ntBASIC1.32□□□□□ -2.2
COMMD3-BMI1R4GMX3 AC005741.1-201ENST00000511094 432 ntBASIC1.32□□□□□ -2.2
COMMD3-BMI1R4GMX3 RNU6-1178P-201ENST00000516674 107 ntBASIC1.32□□□□□ -2.2
COMMD3-BMI1R4GMX3 AC069113.1-201ENST00000517763 267 ntBASIC1.32□□□□□ -2.2
COMMD3-BMI1R4GMX3 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.32□□□□□ -2.2
COMMD3-BMI1R4GMX3 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.32□□□□□ -2.2
COMMD3-BMI1R4GMX3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
COMMD3-BMI1R4GMX3 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
COMMD3-BMI1R4GMX3 LINC02555-201ENST00000563933 1951 ntBASIC1.31□□□□□ -2.2
COMMD3-BMI1R4GMX3 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
COMMD3-BMI1R4GMX3 RNU6-112P-201ENST00000363599 104 ntBASIC1.31□□□□□ -2.2
COMMD3-BMI1R4GMX3 Y_RNA.332-201ENST00000365271 113 ntBASIC1.31□□□□□ -2.2
COMMD3-BMI1R4GMX3 RNU6-393P-201ENST00000384475 107 ntBASIC1.31□□□□□ -2.2
COMMD3-BMI1R4GMX3 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.31□□□□□ -2.2
COMMD3-BMI1R4GMX3 MTCYBP2-201ENST00000407745 171 ntBASIC1.31□□□□□ -2.2
COMMD3-BMI1R4GMX3 AC133104.1-201ENST00000429100 218 ntBASIC1.31□□□□□ -2.2
COMMD3-BMI1R4GMX3 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.31□□□□□ -2.2
COMMD3-BMI1R4GMX3 HMGN2P18-201ENST00000450680 270 ntBASIC1.31□□□□□ -2.2
COMMD3-BMI1R4GMX3 AC130509.1-201ENST00000464158 433 ntBASIC1.31□□□□□ -2.2
COMMD3-BMI1R4GMX3 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.31□□□□□ -2.2
COMMD3-BMI1R4GMX3 AC105417.1-201ENST00000514691 285 ntBASIC1.31□□□□□ -2.2
COMMD3-BMI1R4GMX3 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.31□□□□□ -2.2
COMMD3-BMI1R4GMX3 MIR449C-201ENST00000516047 92 ntBASIC1.31□□□□□ -2.2
COMMD3-BMI1R4GMX3 RN7SKP179-201ENST00000516126 217 ntBASIC1.31□□□□□ -2.2
COMMD3-BMI1R4GMX3 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.31□□□□□ -2.2
COMMD3-BMI1R4GMX3 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.31□□□□□ -2.2
COMMD3-BMI1R4GMX3 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.31□□□□□ -2.2
COMMD3-BMI1R4GMX3 AC005668.1-201ENST00000571142 476 ntBASIC1.31□□□□□ -2.2
COMMD3-BMI1R4GMX3 MIR4703-201ENST00000577728 79 ntBASIC1.31□□□□□ -2.2
COMMD3-BMI1R4GMX3 SNORA77B-201ENST00000578179 125 ntBASIC1.31□□□□□ -2.2
COMMD3-BMI1R4GMX3 MIR3915-201ENST00000578518 97 ntBASIC1.31□□□□□ -2.2
COMMD3-BMI1R4GMX3 AC064872.1-201ENST00000604823 1072 ntBASIC1.31□□□□□ -2.2
COMMD3-BMI1R4GMX3 AP001596.2-201ENST00000608410 312 ntBASIC1.31□□□□□ -2.2
COMMD3-BMI1R4GMX3 SNORD98-201ENST00000636377 67 ntBASIC1.31□□□□□ -2.2
COMMD3-BMI1R4GMX3 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.3□□□□□ -2.2
COMMD3-BMI1R4GMX3 RNU4-15P-201ENST00000362613 141 ntBASIC1.3□□□□□ -2.2
COMMD3-BMI1R4GMX3 RNU1-17P-201ENST00000363022 152 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms