Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 RNY4P14-201ENST00000363656 96 ntBASIC2.18□□□□□ -2.06
PCDHGA1Q9Y5H4 RNY3P3-201ENST00000363816 102 ntBASIC2.18□□□□□ -2.06
PCDHGA1Q9Y5H4 RNU6-1090P-201ENST00000364065 94 ntBASIC2.18□□□□□ -2.06
PCDHGA1Q9Y5H4 RNU6-522P-201ENST00000364497 107 ntBASIC2.18□□□□□ -2.06
PCDHGA1Q9Y5H4 Y_RNA.402-201ENST00000383972 102 ntBASIC2.18□□□□□ -2.06
PCDHGA1Q9Y5H4 MIR29C-201ENST00000385231 88 ntBASIC2.18□□□□□ -2.06
PCDHGA1Q9Y5H4 CBX3P6-201ENST00000430257 527 ntBASIC2.18□□□□□ -2.06
PCDHGA1Q9Y5H4 ERLEC1P1-201ENST00000433806 578 ntBASIC2.18□□□□□ -2.06
PCDHGA1Q9Y5H4 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.18□□□□□ -2.06
PCDHGA1Q9Y5H4 AK3P2-201ENST00000507976 429 ntBASIC2.18□□□□□ -2.06
PCDHGA1Q9Y5H4 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.18□□□□□ -2.06
PCDHGA1Q9Y5H4 SNORA4.4-201ENST00000515921 135 ntBASIC2.18□□□□□ -2.06
PCDHGA1Q9Y5H4 AC087854.1-201ENST00000519706 414 ntBASIC2.18□□□□□ -2.06
PCDHGA1Q9Y5H4 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.18□□□□□ -2.06
PCDHGA1Q9Y5H4 AP000763.2-201ENST00000540641 163 ntBASIC2.18□□□□□ -2.06
PCDHGA1Q9Y5H4 AC018630.3-201ENST00000542637 96 ntBASIC2.18□□□□□ -2.06
PCDHGA1Q9Y5H4 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.18□□□□□ -2.06
PCDHGA1Q9Y5H4 AC010525.2-201ENST00000590920 195 ntBASIC2.18□□□□□ -2.06
PCDHGA1Q9Y5H4 AC009314.1-201ENST00000603871 304 ntBASIC2.18□□□□□ -2.06
PCDHGA1Q9Y5H4 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.18□□□□□ -2.06
PCDHGA1Q9Y5H4 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
PCDHGA1Q9Y5H4 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.18□□□□□ -2.06
PCDHGA1Q9Y5H4 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.17□□□□□ -2.06
PCDHGA1Q9Y5H4 RNU6-451P-201ENST00000362921 107 ntBASIC2.17□□□□□ -2.06
PCDHGA1Q9Y5H4 RNU6-1032P-201ENST00000384100 107 ntBASIC2.17□□□□□ -2.06
PCDHGA1Q9Y5H4 RNU6-692P-201ENST00000384496 107 ntBASIC2.17□□□□□ -2.06
PCDHGA1Q9Y5H4 SNORA64-201ENST00000384674 134 ntBASIC2.17□□□□□ -2.06
PCDHGA1Q9Y5H4 MIR221-201ENST00000385135 110 ntBASIC2.17□□□□□ -2.06
PCDHGA1Q9Y5H4 SNORA26.9-201ENST00000391322 122 ntBASIC2.17□□□□□ -2.06
PCDHGA1Q9Y5H4 HMGN2P39-201ENST00000398005 273 ntBASIC2.17□□□□□ -2.06
PCDHGA1Q9Y5H4 SNORA11.4-201ENST00000408823 129 ntBASIC2.17□□□□□ -2.06
PCDHGA1Q9Y5H4 RN7SKP32-201ENST00000410167 303 ntBASIC2.17□□□□□ -2.06
PCDHGA1Q9Y5H4 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.17□□□□□ -2.06
PCDHGA1Q9Y5H4 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.17□□□□□ -2.06
PCDHGA1Q9Y5H4 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.17□□□□□ -2.06
PCDHGA1Q9Y5H4 MTCO2P3-201ENST00000442543 421 ntBASIC2.17□□□□□ -2.06
PCDHGA1Q9Y5H4 RNA5SP233-201ENST00000459153 113 ntBASIC2.17□□□□□ -2.06
PCDHGA1Q9Y5H4 AC018868.1-201ENST00000491307 315 ntBASIC2.17□□□□□ -2.06
PCDHGA1Q9Y5H4 AC022447.4-201ENST00000504053 364 ntBASIC2.17□□□□□ -2.06
PCDHGA1Q9Y5H4 MIR514B-201ENST00000516774 80 ntBASIC2.17□□□□□ -2.06
PCDHGA1Q9Y5H4 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.17□□□□□ -2.06
PCDHGA1Q9Y5H4 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.17□□□□□ -2.06
PCDHGA1Q9Y5H4 AC107953.1-201ENST00000522216 297 ntBASIC2.17□□□□□ -2.06
PCDHGA1Q9Y5H4 AC109635.3-201ENST00000529536 185 ntBASIC2.17□□□□□ -2.06
PCDHGA1Q9Y5H4 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.17□□□□□ -2.06
PCDHGA1Q9Y5H4 AC007336.1-201ENST00000576365 3828 ntBASIC2.17□□□□□ -2.06
PCDHGA1Q9Y5H4 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.17□□□□□ -2.06
PCDHGA1Q9Y5H4 MIR5692C1-201ENST00000585309 91 ntBASIC2.17□□□□□ -2.06
PCDHGA1Q9Y5H4 AL356157.2-201ENST00000605122 111 ntBASIC2.17□□□□□ -2.06
PCDHGA1Q9Y5H4 AL121757.2-201ENST00000611223 313 ntBASIC2.17□□□□□ -2.06
PCDHGA1Q9Y5H4 AL162373.1-201ENST00000620433 407 ntBASIC2.17□□□□□ -2.06
PCDHGA1Q9Y5H4 MIR6132-201ENST00000622083 109 ntBASIC2.17□□□□□ -2.06
PCDHGA1Q9Y5H4 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
PCDHGA1Q9Y5H4 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
PCDHGA1Q9Y5H4 ZNF355P-201ENST00000427301 3216 ntBASIC2.16□□□□□ -2.06
PCDHGA1Q9Y5H4 SNORA46.1-201ENST00000391069 153 ntBASIC2.16□□□□□ -2.06
PCDHGA1Q9Y5H4 EIF4E2P1-201ENST00000393781 255 ntBASIC2.16□□□□□ -2.06
PCDHGA1Q9Y5H4 RNU2-32P-201ENST00000411193 191 ntBASIC2.16□□□□□ -2.06
PCDHGA1Q9Y5H4 MTCO1P21-201ENST00000416634 589 ntBASIC2.16□□□□□ -2.06
PCDHGA1Q9Y5H4 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.16□□□□□ -2.06
PCDHGA1Q9Y5H4 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.16□□□□□ -2.06
PCDHGA1Q9Y5H4 C8orf59P1-201ENST00000429930 303 ntBASIC2.16□□□□□ -2.06
PCDHGA1Q9Y5H4 SNAP23P1-201ENST00000433229 246 ntBASIC2.16□□□□□ -2.06
PCDHGA1Q9Y5H4 AC018634.1-201ENST00000437554 401 ntBASIC2.16□□□□□ -2.06
PCDHGA1Q9Y5H4 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.16□□□□□ -2.06
PCDHGA1Q9Y5H4 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.16□□□□□ -2.06
PCDHGA1Q9Y5H4 RNA5SP200-201ENST00000516360 103 ntBASIC2.16□□□□□ -2.06
PCDHGA1Q9Y5H4 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.16□□□□□ -2.06
PCDHGA1Q9Y5H4 AC022616.8-201ENST00000533569 253 ntBASIC2.16□□□□□ -2.06
PCDHGA1Q9Y5H4 AC107304.1-201ENST00000604229 296 ntBASIC2.16□□□□□ -2.06
PCDHGA1Q9Y5H4 AC233981.2-201ENST00000611524 1614 ntBASIC2.16□□□□□ -2.06
PCDHGA1Q9Y5H4 AL356292.1-201ENST00000283110 373 ntBASIC2.15□□□□□ -2.07
PCDHGA1Q9Y5H4 RNU1-23P-201ENST00000363361 144 ntBASIC2.15□□□□□ -2.07
PCDHGA1Q9Y5H4 Y_RNA.256-201ENST00000364594 104 ntBASIC2.15□□□□□ -2.07
PCDHGA1Q9Y5H4 U8.8-201ENST00000365399 135 ntBASIC2.15□□□□□ -2.07
PCDHGA1Q9Y5H4 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
PCDHGA1Q9Y5H4 Y_RNA.450-201ENST00000384198 113 ntBASIC2.15□□□□□ -2.07
PCDHGA1Q9Y5H4 RNU6-43P-201ENST00000384302 107 ntBASIC2.15□□□□□ -2.07
PCDHGA1Q9Y5H4 SNORD73A-201ENST00000386062 65 ntBASIC2.15□□□□□ -2.07
PCDHGA1Q9Y5H4 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
PCDHGA1Q9Y5H4 AL591034.2-201ENST00000402839 359 ntBASIC2.15□□□□□ -2.07
PCDHGA1Q9Y5H4 RPS15AP28-201ENST00000435088 386 ntBASIC2.15□□□□□ -2.07
PCDHGA1Q9Y5H4 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.15□□□□□ -2.07
PCDHGA1Q9Y5H4 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.15□□□□□ -2.07
PCDHGA1Q9Y5H4 AL031659.1-201ENST00000447075 539 ntBASIC2.15□□□□□ -2.07
PCDHGA1Q9Y5H4 AL353752.1-201ENST00000454946 260 ntBASIC2.15□□□□□ -2.07
PCDHGA1Q9Y5H4 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.15□□□□□ -2.07
PCDHGA1Q9Y5H4 SNORA19.2-201ENST00000516013 114 ntBASIC2.15□□□□□ -2.07
PCDHGA1Q9Y5H4 RNU6-667P-201ENST00000517186 102 ntBASIC2.15□□□□□ -2.07
PCDHGA1Q9Y5H4 RNU6-323P-201ENST00000521915 107 ntBASIC2.15□□□□□ -2.07
PCDHGA1Q9Y5H4 MTND1P35-201ENST00000526739 508 ntBASIC2.15□□□□□ -2.07
PCDHGA1Q9Y5H4 AP005597.4-201ENST00000526762 229 ntBASIC2.15□□□□□ -2.07
PCDHGA1Q9Y5H4 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.15□□□□□ -2.07
PCDHGA1Q9Y5H4 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.15□□□□□ -2.07
PCDHGA1Q9Y5H4 AL357078.3-201ENST00000607528 618 ntBASIC2.15□□□□□ -2.07
PCDHGA1Q9Y5H4 MIR6766-201ENST00000622641 72 ntBASIC2.15□□□□□ -2.07
PCDHGA1Q9Y5H4 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.14□□□□□ -2.07
PCDHGA1Q9Y5H4 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
PCDHGA1Q9Y5H4 RNU6-1141P-201ENST00000364520 107 ntBASIC2.14□□□□□ -2.07
PCDHGA1Q9Y5H4 U3.13-201ENST00000364804 214 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms