Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 MIR3678-201ENST00000578455 94 ntBASIC-0.31□□□□□ -2.46
AP4S1Q9Y587 MTND4P21-201ENST00000453886 1357 ntBASIC-0.32□□□□□ -2.46
AP4S1Q9Y587 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.32□□□□□ -2.46
AP4S1Q9Y587 SNORA27.3-201ENST00000364937 134 ntBASIC-0.32□□□□□ -2.46
AP4S1Q9Y587 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC-0.32□□□□□ -2.46
AP4S1Q9Y587 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC-0.32□□□□□ -2.46
AP4S1Q9Y587 RNU6-952P-201ENST00000391164 108 ntBASIC-0.32□□□□□ -2.46
AP4S1Q9Y587 AC068533.2-201ENST00000411872 306 ntBASIC-0.32□□□□□ -2.46
AP4S1Q9Y587 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC-0.32□□□□□ -2.46
AP4S1Q9Y587 AC073261.1-201ENST00000429409 121 ntBASIC-0.32□□□□□ -2.46
AP4S1Q9Y587 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC-0.32□□□□□ -2.46
AP4S1Q9Y587 AC002542.1-201ENST00000440683 193 ntBASIC-0.32□□□□□ -2.46
AP4S1Q9Y587 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC-0.32□□□□□ -2.46
AP4S1Q9Y587 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC-0.32□□□□□ -2.46
AP4S1Q9Y587 AC092989.1-201ENST00000481235 277 ntBASIC-0.32□□□□□ -2.46
AP4S1Q9Y587 HMGB1P29-201ENST00000505659 499 ntBASIC-0.32□□□□□ -2.46
AP4S1Q9Y587 RNU6-1110P-201ENST00000516462 101 ntBASIC-0.32□□□□□ -2.46
AP4S1Q9Y587 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.32□□□□□ -2.46
AP4S1Q9Y587 CR383656.8-201ENST00000549046 145 ntBASIC-0.32□□□□□ -2.46
AP4S1Q9Y587 AC022523.2-201ENST00000561045 150 ntBASIC-0.32□□□□□ -2.46
AP4S1Q9Y587 TPRKBP2-201ENST00000565969 475 ntBASIC-0.32□□□□□ -2.46
AP4S1Q9Y587 AC104408.1-201ENST00000605241 170 ntBASIC-0.32□□□□□ -2.46
AP4S1Q9Y587 RNU6-343P-201ENST00000364709 104 ntBASIC-0.33□□□□□ -2.46
AP4S1Q9Y587 SNORA12.2-201ENST00000391040 156 ntBASIC-0.33□□□□□ -2.46
AP4S1Q9Y587 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC-0.33□□□□□ -2.46
AP4S1Q9Y587 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC-0.33□□□□□ -2.46
AP4S1Q9Y587 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC-0.33□□□□□ -2.46
AP4S1Q9Y587 RNU4-27P-201ENST00000410889 139 ntBASIC-0.33□□□□□ -2.46
AP4S1Q9Y587 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC-0.33□□□□□ -2.46
AP4S1Q9Y587 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC-0.33□□□□□ -2.46
AP4S1Q9Y587 RPL23AP50-201ENST00000434149 455 ntBASIC-0.33□□□□□ -2.46
AP4S1Q9Y587 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC-0.33□□□□□ -2.46
AP4S1Q9Y587 ZKSCAN7P1-201ENST00000543668 673 ntBASIC-0.33□□□□□ -2.46
AP4S1Q9Y587 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC-0.33□□□□□ -2.46
AP4S1Q9Y587 AC104985.3-201ENST00000623479 597 ntBASIC-0.33□□□□□ -2.46
AP4S1Q9Y587 Y_RNA.116-201ENST00000363292 103 ntBASIC-0.34□□□□□ -2.46
AP4S1Q9Y587 RNA5SP496-201ENST00000391240 109 ntBASIC-0.34□□□□□ -2.46
AP4S1Q9Y587 AL390237.1-201ENST00000404226 1415 ntBASIC-0.34□□□□□ -2.46
AP4S1Q9Y587 MTCO3P41-201ENST00000414801 328 ntBASIC-0.34□□□□□ -2.46
AP4S1Q9Y587 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.34□□□□□ -2.46
AP4S1Q9Y587 GTF2IP12-201ENST00000456547 356 ntBASIC-0.34□□□□□ -2.46
AP4S1Q9Y587 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC-0.34□□□□□ -2.46
AP4S1Q9Y587 AC091860.1-201ENST00000505723 432 ntBASIC-0.34□□□□□ -2.46
AP4S1Q9Y587 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC-0.34□□□□□ -2.46
AP4S1Q9Y587 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC-0.34□□□□□ -2.46
AP4S1Q9Y587 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC-0.35□□□□□ -2.46
AP4S1Q9Y587 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC-0.35□□□□□ -2.47
AP4S1Q9Y587 RNA5SP390-201ENST00000410191 113 ntBASIC-0.35□□□□□ -2.47
AP4S1Q9Y587 RN7SKP266-201ENST00000410232 287 ntBASIC-0.35□□□□□ -2.47
AP4S1Q9Y587 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC-0.35□□□□□ -2.47
AP4S1Q9Y587 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.35□□□□□ -2.47
AP4S1Q9Y587 AC121161.1-201ENST00000510606 652 ntBASIC-0.35□□□□□ -2.47
AP4S1Q9Y587 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC-0.35□□□□□ -2.47
AP4S1Q9Y587 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC-0.35□□□□□ -2.47
AP4S1Q9Y587 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC-0.35□□□□□ -2.47
AP4S1Q9Y587 RPL23AP91-201ENST00000569211 455 ntBASIC-0.35□□□□□ -2.47
AP4S1Q9Y587 AL353149.1-201ENST00000610667 244 ntBASIC-0.35□□□□□ -2.47
AP4S1Q9Y587 AC106754.2-201ENST00000623006 233 ntBASIC-0.35□□□□□ -2.47
AP4S1Q9Y587 AC091925.1-201ENST00000623204 462 ntBASIC-0.35□□□□□ -2.47
AP4S1Q9Y587 MIR1322-201ENST00000638013 71 ntBASIC-0.35□□□□□ -2.47
AP4S1Q9Y587 MIR330-201ENST00000362196 94 ntBASIC-0.36□□□□□ -2.47
AP4S1Q9Y587 MIR518E-201ENST00000385252 88 ntBASIC-0.36□□□□□ -2.47
AP4S1Q9Y587 AL034345.1-201ENST00000407768 123 ntBASIC-0.36□□□□□ -2.47
AP4S1Q9Y587 RNU6-575P-201ENST00000411326 105 ntBASIC-0.36□□□□□ -2.47
AP4S1Q9Y587 AC013262.1-201ENST00000426710 252 ntBASIC-0.36□□□□□ -2.47
AP4S1Q9Y587 AC000111.3-201ENST00000433478 193 ntBASIC-0.36□□□□□ -2.47
AP4S1Q9Y587 AP000797.1-201ENST00000478870 387 ntBASIC-0.36□□□□□ -2.47
AP4S1Q9Y587 NAF1-205ENST00000509434 385 ntTSL 3 BASIC-0.36□□□□□ -2.47
AP4S1Q9Y587 RN7SL793P-201ENST00000583259 296 ntBASIC-0.36□□□□□ -2.47
AP4S1Q9Y587 AC006213.5-201ENST00000619673 288 ntBASIC-0.36□□□□□ -2.47
AP4S1Q9Y587 AC008133.2-201ENST00000624540 351 ntBASIC-0.36□□□□□ -2.47
AP4S1Q9Y587 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC-0.36□□□□□ -2.47
AP4S1Q9Y587 RNU6-97P-201ENST00000363387 104 ntBASIC-0.37□□□□□ -2.47
AP4S1Q9Y587 RNU6-796P-201ENST00000391086 107 ntBASIC-0.37□□□□□ -2.47
AP4S1Q9Y587 SNORA12-201ENST00000391162 147 ntBASIC-0.37□□□□□ -2.47
AP4S1Q9Y587 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC-0.37□□□□□ -2.47
AP4S1Q9Y587 AC104332.1-201ENST00000440471 797 ntBASIC-0.37□□□□□ -2.47
AP4S1Q9Y587 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC-0.37□□□□□ -2.47
AP4S1Q9Y587 AC003071.1-201ENST00000451219 789 ntBASIC-0.37□□□□□ -2.47
AP4S1Q9Y587 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC-0.37□□□□□ -2.47
AP4S1Q9Y587 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC-0.37□□□□□ -2.47
AP4S1Q9Y587 MTCO3P10-201ENST00000455912 772 ntBASIC-0.37□□□□□ -2.47
AP4S1Q9Y587 snoU13.25-201ENST00000458945 104 ntBASIC-0.37□□□□□ -2.47
AP4S1Q9Y587 AC021146.8-201ENST00000507455 733 ntBASIC-0.37□□□□□ -2.47
AP4S1Q9Y587 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC-0.37□□□□□ -2.47
AP4S1Q9Y587 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC-0.37□□□□□ -2.47
AP4S1Q9Y587 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.37□□□□□ -2.47
AP4S1Q9Y587 LRRC34P2-201ENST00000514850 553 ntBASIC-0.37□□□□□ -2.47
AP4S1Q9Y587 RNU5F-2P-201ENST00000516066 82 ntBASIC-0.37□□□□□ -2.47
AP4S1Q9Y587 RNU6-1041P-201ENST00000516254 102 ntBASIC-0.37□□□□□ -2.47
AP4S1Q9Y587 MTND4LP26-201ENST00000518144 282 ntBASIC-0.37□□□□□ -2.47
AP4S1Q9Y587 AC027419.1-201ENST00000522976 328 ntBASIC-0.37□□□□□ -2.47
AP4S1Q9Y587 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.37□□□□□ -2.47
AP4S1Q9Y587 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC-0.37□□□□□ -2.47
AP4S1Q9Y587 AC131055.1-201ENST00000584626 316 ntBASIC-0.37□□□□□ -2.47
AP4S1Q9Y587 AL929325.1-201ENST00000603096 117 ntBASIC-0.37□□□□□ -2.47
AP4S1Q9Y587 AC136475.10-201ENST00000620253 385 ntBASIC-0.37□□□□□ -2.47
AP4S1Q9Y587 AL138955.1-201ENST00000622881 1040 ntBASIC-0.37□□□□□ -2.47
AP4S1Q9Y587 RNU4-48P-201ENST00000365559 182 ntBASIC-0.38□□□□□ -2.47
AP4S1Q9Y587 MIR518A1-201ENST00000385068 85 ntBASIC-0.38□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms