Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.84□□□□□ -2.27
HDGFL3Q9Y3E1 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.84□□□□□ -2.27
HDGFL3Q9Y3E1 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.84□□□□□ -2.27
HDGFL3Q9Y3E1 AC012507.3-201ENST00000603556 477 ntBASIC0.84□□□□□ -2.27
HDGFL3Q9Y3E1 MZT1P2-201ENST00000604387 248 ntBASIC0.84□□□□□ -2.27
HDGFL3Q9Y3E1 MIR6857-201ENST00000613267 93 ntBASIC0.84□□□□□ -2.27
HDGFL3Q9Y3E1 AC083806.3-201ENST00000614016 455 ntBASIC0.84□□□□□ -2.27
HDGFL3Q9Y3E1 MIR8065-201ENST00000620577 100 ntBASIC0.84□□□□□ -2.27
HDGFL3Q9Y3E1 AL133216.2-202ENST00000634512 349 ntBASIC0.84□□□□□ -2.27
HDGFL3Q9Y3E1 AL159152.1-201ENST00000635019 2587 ntBASIC0.83□□□□□ -2.28
HDGFL3Q9Y3E1 AL391516.1-201ENST00000554380 2449 ntBASIC0.83□□□□□ -2.28
HDGFL3Q9Y3E1 RNU6-1141P-201ENST00000364520 107 ntBASIC0.83□□□□□ -2.28
HDGFL3Q9Y3E1 SNORD31B-201ENST00000364977 69 ntBASIC0.83□□□□□ -2.28
HDGFL3Q9Y3E1 RNU6-83P-201ENST00000384568 112 ntBASIC0.83□□□□□ -2.28
HDGFL3Q9Y3E1 MIR222-201ENST00000384992 110 ntBASIC0.83□□□□□ -2.28
HDGFL3Q9Y3E1 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
HDGFL3Q9Y3E1 RNU6-1245P-201ENST00000411130 106 ntBASIC0.83□□□□□ -2.28
HDGFL3Q9Y3E1 SNX2P2-201ENST00000424553 323 ntBASIC0.83□□□□□ -2.28
HDGFL3Q9Y3E1 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.83□□□□□ -2.28
HDGFL3Q9Y3E1 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.83□□□□□ -2.28
HDGFL3Q9Y3E1 AC016925.1-201ENST00000458303 298 ntBASIC0.83□□□□□ -2.28
HDGFL3Q9Y3E1 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.83□□□□□ -2.28
HDGFL3Q9Y3E1 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.83□□□□□ -2.28
HDGFL3Q9Y3E1 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.83□□□□□ -2.28
HDGFL3Q9Y3E1 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.83□□□□□ -2.28
HDGFL3Q9Y3E1 MTND4LP18-201ENST00000526864 291 ntBASIC0.83□□□□□ -2.28
HDGFL3Q9Y3E1 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.83□□□□□ -2.28
HDGFL3Q9Y3E1 AC109446.1-201ENST00000566172 220 ntBASIC0.83□□□□□ -2.28
HDGFL3Q9Y3E1 MIR3976-201ENST00000606807 139 ntBASIC0.83□□□□□ -2.28
HDGFL3Q9Y3E1 RNU4-5P-201ENST00000607255 135 ntBASIC0.83□□□□□ -2.28
HDGFL3Q9Y3E1 AL359740.1-201ENST00000624340 592 ntBASIC0.83□□□□□ -2.28
HDGFL3Q9Y3E1 AC099654.5-201ENST00000636479 350 ntBASIC0.83□□□□□ -2.28
HDGFL3Q9Y3E1 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.83□□□□□ -2.28
HDGFL3Q9Y3E1 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
HDGFL3Q9Y3E1 RNU6-43P-201ENST00000384302 107 ntBASIC0.82□□□□□ -2.28
HDGFL3Q9Y3E1 AL117342.1-201ENST00000404861 406 ntBASIC0.82□□□□□ -2.28
HDGFL3Q9Y3E1 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.82□□□□□ -2.28
HDGFL3Q9Y3E1 C1DP2-201ENST00000418167 426 ntBASIC0.82□□□□□ -2.28
HDGFL3Q9Y3E1 AC119618.1-201ENST00000434191 222 ntBASIC0.82□□□□□ -2.28
HDGFL3Q9Y3E1 AC244670.1-201ENST00000436879 112 ntBASIC0.82□□□□□ -2.28
HDGFL3Q9Y3E1 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.82□□□□□ -2.28
HDGFL3Q9Y3E1 PGBD4P5-201ENST00000445958 426 ntBASIC0.82□□□□□ -2.28
HDGFL3Q9Y3E1 RPL31P3-201ENST00000458430 332 ntBASIC0.82□□□□□ -2.28
HDGFL3Q9Y3E1 AC114982.1-201ENST00000469402 321 ntBASIC0.82□□□□□ -2.28
HDGFL3Q9Y3E1 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.82□□□□□ -2.28
HDGFL3Q9Y3E1 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.82□□□□□ -2.28
HDGFL3Q9Y3E1 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.82□□□□□ -2.28
HDGFL3Q9Y3E1 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.82□□□□□ -2.28
HDGFL3Q9Y3E1 NIFKP6-201ENST00000598115 845 ntBASIC0.82□□□□□ -2.28
HDGFL3Q9Y3E1 AL031775.1-201ENST00000607014 887 ntBASIC0.82□□□□□ -2.28
HDGFL3Q9Y3E1 AL157392.4-201ENST00000609756 345 ntBASIC0.82□□□□□ -2.28
HDGFL3Q9Y3E1 AC104010.1-201ENST00000616889 150 ntBASIC0.82□□□□□ -2.28
HDGFL3Q9Y3E1 AC012676.2-201ENST00000619258 186 ntBASIC0.82□□□□□ -2.28
HDGFL3Q9Y3E1 AL031667.3-201ENST00000620124 655 ntBASIC0.82□□□□□ -2.28
HDGFL3Q9Y3E1 AC027335.2-201ENST00000624030 375 ntBASIC0.82□□□□□ -2.28
HDGFL3Q9Y3E1 Y_RNA.18-201ENST00000362461 102 ntBASIC0.81□□□□□ -2.28
HDGFL3Q9Y3E1 Y_RNA.22-201ENST00000362492 102 ntBASIC0.81□□□□□ -2.28
HDGFL3Q9Y3E1 RNU6-660P-201ENST00000364566 109 ntBASIC0.81□□□□□ -2.28
HDGFL3Q9Y3E1 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
HDGFL3Q9Y3E1 RNU6-968P-201ENST00000384076 107 ntBASIC0.81□□□□□ -2.28
HDGFL3Q9Y3E1 SNORA29-201ENST00000384183 140 ntBASIC0.81□□□□□ -2.28
HDGFL3Q9Y3E1 RNU6-387P-201ENST00000411331 105 ntBASIC0.81□□□□□ -2.28
HDGFL3Q9Y3E1 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.81□□□□□ -2.28
HDGFL3Q9Y3E1 AL590135.1-201ENST00000422215 156 ntBASIC0.81□□□□□ -2.28
HDGFL3Q9Y3E1 AC019205.3-201ENST00000424573 156 ntBASIC0.81□□□□□ -2.28
HDGFL3Q9Y3E1 AC007283.2-201ENST00000424739 197 ntBASIC0.81□□□□□ -2.28
HDGFL3Q9Y3E1 AC010975.2-201ENST00000427781 588 ntBASIC0.81□□□□□ -2.28
HDGFL3Q9Y3E1 AC016700.2-201ENST00000446011 156 ntBASIC0.81□□□□□ -2.28
HDGFL3Q9Y3E1 snoU13.27-201ENST00000459278 104 ntBASIC0.81□□□□□ -2.28
HDGFL3Q9Y3E1 AC007547.1-201ENST00000462177 490 ntBASIC0.81□□□□□ -2.28
HDGFL3Q9Y3E1 AC010531.2-201ENST00000465012 153 ntBASIC0.81□□□□□ -2.28
HDGFL3Q9Y3E1 AC015911.1-201ENST00000495111 156 ntBASIC0.81□□□□□ -2.28
HDGFL3Q9Y3E1 ARL2BPP4-201ENST00000506854 471 ntBASIC0.81□□□□□ -2.28
HDGFL3Q9Y3E1 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.81□□□□□ -2.28
HDGFL3Q9Y3E1 RNU6-113P-201ENST00000516653 101 ntBASIC0.81□□□□□ -2.28
HDGFL3Q9Y3E1 AP001893.2-201ENST00000526949 202 ntBASIC0.81□□□□□ -2.28
HDGFL3Q9Y3E1 AP003181.2-201ENST00000528941 181 ntBASIC0.81□□□□□ -2.28
HDGFL3Q9Y3E1 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.81□□□□□ -2.28
HDGFL3Q9Y3E1 AC091489.2-201ENST00000566263 604 ntBASIC0.81□□□□□ -2.28
HDGFL3Q9Y3E1 BNIP3P16-201ENST00000589779 534 ntBASIC0.81□□□□□ -2.28
HDGFL3Q9Y3E1 BNIP3P8-201ENST00000597863 560 ntBASIC0.81□□□□□ -2.28
HDGFL3Q9Y3E1 AC105148.1-201ENST00000604961 409 ntBASIC0.81□□□□□ -2.28
HDGFL3Q9Y3E1 AL451064.1-201ENST00000607718 471 ntBASIC0.81□□□□□ -2.28
HDGFL3Q9Y3E1 AL365434.2-201ENST00000607979 234 ntBASIC0.81□□□□□ -2.28
HDGFL3Q9Y3E1 AL607023.1-201ENST00000620045 248 ntBASIC0.81□□□□□ -2.28
HDGFL3Q9Y3E1 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.8□□□□□ -2.28
HDGFL3Q9Y3E1 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
HDGFL3Q9Y3E1 RNU1-96P-201ENST00000364163 162 ntBASIC0.8□□□□□ -2.28
HDGFL3Q9Y3E1 RNU6-641P-201ENST00000384006 107 ntBASIC0.8□□□□□ -2.28
HDGFL3Q9Y3E1 RNU6-533P-201ENST00000384144 107 ntBASIC0.8□□□□□ -2.28
HDGFL3Q9Y3E1 RNU6-692P-201ENST00000384496 107 ntBASIC0.8□□□□□ -2.28
HDGFL3Q9Y3E1 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
HDGFL3Q9Y3E1 SNORA26.3-201ENST00000391119 136 ntBASIC0.8□□□□□ -2.28
HDGFL3Q9Y3E1 RN7SKP61-201ENST00000410642 295 ntBASIC0.8□□□□□ -2.28
HDGFL3Q9Y3E1 RNU6-293P-201ENST00000411259 106 ntBASIC0.8□□□□□ -2.28
HDGFL3Q9Y3E1 AC078809.1-201ENST00000427601 140 ntBASIC0.8□□□□□ -2.28
HDGFL3Q9Y3E1 MTCO3P29-201ENST00000432119 779 ntBASIC0.8□□□□□ -2.28
HDGFL3Q9Y3E1 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.8□□□□□ -2.28
HDGFL3Q9Y3E1 AC069257.2-201ENST00000441819 155 ntBASIC0.8□□□□□ -2.28
HDGFL3Q9Y3E1 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms