Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC010486.3-201ENST00000511602 785 ntBASIC1.49□□□□□ -2.17
KCNIP3Q9Y2W7 AC010486.1-201ENST00000511793 424 ntBASIC1.49□□□□□ -2.17
KCNIP3Q9Y2W7 RNU6-970P-201ENST00000516312 107 ntBASIC1.49□□□□□ -2.17
KCNIP3Q9Y2W7 RNU6-567P-201ENST00000516746 107 ntBASIC1.49□□□□□ -2.17
KCNIP3Q9Y2W7 HSPE1P18-201ENST00000517602 280 ntBASIC1.49□□□□□ -2.17
KCNIP3Q9Y2W7 AP002770.2-201ENST00000543613 532 ntBASIC1.49□□□□□ -2.17
KCNIP3Q9Y2W7 AC021231.3-201ENST00000558497 370 ntBASIC1.49□□□□□ -2.17
KCNIP3Q9Y2W7 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.49□□□□□ -2.17
KCNIP3Q9Y2W7 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.49□□□□□ -2.17
KCNIP3Q9Y2W7 AC109446.1-201ENST00000566172 220 ntBASIC1.49□□□□□ -2.17
KCNIP3Q9Y2W7 CYP4A27P-201ENST00000567218 190 ntBASIC1.49□□□□□ -2.17
KCNIP3Q9Y2W7 MIR4285-201ENST00000581001 85 ntBASIC1.49□□□□□ -2.17
KCNIP3Q9Y2W7 AC005786.1-201ENST00000588553 154 ntBASIC1.49□□□□□ -2.17
KCNIP3Q9Y2W7 AC087683.1-201ENST00000591187 441 ntBASIC1.49□□□□□ -2.17
KCNIP3Q9Y2W7 SNRPGP19-201ENST00000603826 189 ntBASIC1.49□□□□□ -2.17
KCNIP3Q9Y2W7 AC005000.2-201ENST00000605468 310 ntBASIC1.49□□□□□ -2.17
KCNIP3Q9Y2W7 AL354950.2-201ENST00000617939 290 ntBASIC1.49□□□□□ -2.17
KCNIP3Q9Y2W7 AC022513.1-201ENST00000624512 117 ntBASIC1.49□□□□□ -2.17
KCNIP3Q9Y2W7 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
KCNIP3Q9Y2W7 Y_RNA.1-201ENST00000352915 104 ntBASIC1.48□□□□□ -2.17
KCNIP3Q9Y2W7 MIR340-201ENST00000362125 95 ntBASIC1.48□□□□□ -2.17
KCNIP3Q9Y2W7 SNORA64-201ENST00000384674 134 ntBASIC1.48□□□□□ -2.17
KCNIP3Q9Y2W7 AL606923.1-201ENST00000406616 190 ntBASIC1.48□□□□□ -2.17
KCNIP3Q9Y2W7 CDK8P2-201ENST00000415020 547 ntBASIC1.48□□□□□ -2.17
KCNIP3Q9Y2W7 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.48□□□□□ -2.17
KCNIP3Q9Y2W7 RPS3AP17-201ENST00000472594 777 ntBASIC1.48□□□□□ -2.17
KCNIP3Q9Y2W7 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.48□□□□□ -2.17
KCNIP3Q9Y2W7 SNORA40.12-201ENST00000516329 111 ntBASIC1.48□□□□□ -2.17
KCNIP3Q9Y2W7 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.48□□□□□ -2.17
KCNIP3Q9Y2W7 MIR1273D-201ENST00000577266 86 ntBASIC1.48□□□□□ -2.17
KCNIP3Q9Y2W7 AC119751.7-201ENST00000600494 245 ntBASIC1.48□□□□□ -2.17
KCNIP3Q9Y2W7 AC068944.2-201ENST00000610373 403 ntBASIC1.48□□□□□ -2.17
KCNIP3Q9Y2W7 AC005520.5-201ENST00000613926 164 ntBASIC1.48□□□□□ -2.17
KCNIP3Q9Y2W7 AC233981.2-201ENST00000611524 1614 ntBASIC1.48□□□□□ -2.17
KCNIP3Q9Y2W7 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
KCNIP3Q9Y2W7 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
KCNIP3Q9Y2W7 Y_RNA.296-201ENST00000364930 108 ntBASIC1.47□□□□□ -2.17
KCNIP3Q9Y2W7 SNORD48-201ENST00000364953 64 ntBASIC1.47□□□□□ -2.17
KCNIP3Q9Y2W7 SNORA67.3-201ENST00000384366 140 ntBASIC1.47□□□□□ -2.17
KCNIP3Q9Y2W7 Y_RNA.504-201ENST00000384481 104 ntBASIC1.47□□□□□ -2.17
KCNIP3Q9Y2W7 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
KCNIP3Q9Y2W7 RNA5SP219-201ENST00000390940 113 ntBASIC1.47□□□□□ -2.17
KCNIP3Q9Y2W7 MTCO3P41-201ENST00000414801 328 ntBASIC1.47□□□□□ -2.17
KCNIP3Q9Y2W7 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.47□□□□□ -2.17
KCNIP3Q9Y2W7 AC130509.1-201ENST00000464158 433 ntBASIC1.47□□□□□ -2.17
KCNIP3Q9Y2W7 AC010424.1-201ENST00000506336 297 ntBASIC1.47□□□□□ -2.17
KCNIP3Q9Y2W7 AC008834.1-201ENST00000511612 175 ntBASIC1.47□□□□□ -2.17
KCNIP3Q9Y2W7 SNORA14.1-201ENST00000516113 141 ntBASIC1.47□□□□□ -2.17
KCNIP3Q9Y2W7 EIF4A1P12-201ENST00000551910 141 ntBASIC1.47□□□□□ -2.17
KCNIP3Q9Y2W7 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.47□□□□□ -2.17
KCNIP3Q9Y2W7 SUB1P4-201ENST00000566062 339 ntBASIC1.47□□□□□ -2.17
KCNIP3Q9Y2W7 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.47□□□□□ -2.17
KCNIP3Q9Y2W7 MIR3198-2-201ENST00000577868 80 ntBASIC1.47□□□□□ -2.17
KCNIP3Q9Y2W7 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.47□□□□□ -2.17
KCNIP3Q9Y2W7 MIR3162-201ENST00000581818 82 ntBASIC1.47□□□□□ -2.17
KCNIP3Q9Y2W7 VN1R80P-201ENST00000597126 338 ntBASIC1.47□□□□□ -2.17
KCNIP3Q9Y2W7 AC007684.1-201ENST00000609671 477 ntBASIC1.47□□□□□ -2.17
KCNIP3Q9Y2W7 AL136221.1-201ENST00000621449 509 ntBASIC1.47□□□□□ -2.17
KCNIP3Q9Y2W7 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.47□□□□□ -2.17
KCNIP3Q9Y2W7 ZNF355P-201ENST00000427301 3216 ntBASIC1.47□□□□□ -2.17
KCNIP3Q9Y2W7 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.46□□□□□ -2.18
KCNIP3Q9Y2W7 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
KCNIP3Q9Y2W7 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.46□□□□□ -2.18
KCNIP3Q9Y2W7 SNORA32.2-201ENST00000384049 122 ntBASIC1.46□□□□□ -2.18
KCNIP3Q9Y2W7 SNORA36A-201ENST00000384221 132 ntBASIC1.46□□□□□ -2.18
KCNIP3Q9Y2W7 RNU6-378P-201ENST00000384324 107 ntBASIC1.46□□□□□ -2.18
KCNIP3Q9Y2W7 SNORD73A-201ENST00000386062 65 ntBASIC1.46□□□□□ -2.18
KCNIP3Q9Y2W7 Y_RNA.582-201ENST00000391023 95 ntBASIC1.46□□□□□ -2.18
KCNIP3Q9Y2W7 RNU6-955P-201ENST00000410497 104 ntBASIC1.46□□□□□ -2.18
KCNIP3Q9Y2W7 RNU2-41P-201ENST00000410991 178 ntBASIC1.46□□□□□ -2.18
KCNIP3Q9Y2W7 POLHP1-201ENST00000411806 470 ntBASIC1.46□□□□□ -2.18
KCNIP3Q9Y2W7 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.46□□□□□ -2.18
KCNIP3Q9Y2W7 AL606489.2-201ENST00000433886 234 ntBASIC1.46□□□□□ -2.18
KCNIP3Q9Y2W7 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.46□□□□□ -2.18
KCNIP3Q9Y2W7 AL121601.2-201ENST00000438019 707 ntBASIC1.46□□□□□ -2.18
KCNIP3Q9Y2W7 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.46□□□□□ -2.18
KCNIP3Q9Y2W7 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
KCNIP3Q9Y2W7 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.46□□□□□ -2.18
KCNIP3Q9Y2W7 AC079140.3-201ENST00000511111 550 ntBASIC1.46□□□□□ -2.18
KCNIP3Q9Y2W7 AC026407.1-201ENST00000518369 204 ntBASIC1.46□□□□□ -2.18
KCNIP3Q9Y2W7 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.46□□□□□ -2.18
KCNIP3Q9Y2W7 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.46□□□□□ -2.18
KCNIP3Q9Y2W7 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.46□□□□□ -2.18
KCNIP3Q9Y2W7 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.46□□□□□ -2.18
KCNIP3Q9Y2W7 RPL17P51-201ENST00000605218 238 ntBASIC1.46□□□□□ -2.18
KCNIP3Q9Y2W7 AC116312.1-201ENST00000606841 314 ntBASIC1.46□□□□□ -2.18
KCNIP3Q9Y2W7 AC009994.1-201ENST00000606889 253 ntBASIC1.46□□□□□ -2.18
KCNIP3Q9Y2W7 AC090582.1-201ENST00000636321 199 ntBASIC1.46□□□□□ -2.18
KCNIP3Q9Y2W7 MTND5P9-201ENST00000503854 1755 ntBASIC1.46□□□□□ -2.18
KCNIP3Q9Y2W7 RNU6-82P-201ENST00000363970 107 ntBASIC1.45□□□□□ -2.18
KCNIP3Q9Y2W7 RNA5SP363-201ENST00000365072 115 ntBASIC1.45□□□□□ -2.18
KCNIP3Q9Y2W7 Y_RNA.381-201ENST00000365666 102 ntBASIC1.45□□□□□ -2.18
KCNIP3Q9Y2W7 RNU6-1106P-201ENST00000390845 107 ntBASIC1.45□□□□□ -2.18
KCNIP3Q9Y2W7 AF228730.1-201ENST00000397972 663 ntBASIC1.45□□□□□ -2.18
KCNIP3Q9Y2W7 MTCO3P46-201ENST00000425787 232 ntBASIC1.45□□□□□ -2.18
KCNIP3Q9Y2W7 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
KCNIP3Q9Y2W7 AC096638.1-201ENST00000444678 216 ntBASIC1.45□□□□□ -2.18
KCNIP3Q9Y2W7 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.45□□□□□ -2.18
KCNIP3Q9Y2W7 RPL31P3-201ENST00000458430 332 ntBASIC1.45□□□□□ -2.18
KCNIP3Q9Y2W7 TOMM22P6-201ENST00000465035 409 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms