Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 SNORD14D-201ENST00000384390 87 ntBASIC1.8□□□□□ -2.12
RNF6Q9Y252 Y_RNA.582-201ENST00000391023 95 ntBASIC1.8□□□□□ -2.12
RNF6Q9Y252 SNORA46.1-201ENST00000391069 153 ntBASIC1.8□□□□□ -2.12
RNF6Q9Y252 MIR1294-201ENST00000408503 142 ntBASIC1.8□□□□□ -2.12
RNF6Q9Y252 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.8□□□□□ -2.12
RNF6Q9Y252 AL117339.3-201ENST00000418733 162 ntBASIC1.8□□□□□ -2.12
RNF6Q9Y252 HMGN2P19-201ENST00000425149 265 ntBASIC1.8□□□□□ -2.12
RNF6Q9Y252 CBX3P6-201ENST00000430257 527 ntBASIC1.8□□□□□ -2.12
RNF6Q9Y252 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.8□□□□□ -2.12
RNF6Q9Y252 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.8□□□□□ -2.12
RNF6Q9Y252 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.8□□□□□ -2.12
RNF6Q9Y252 TPT1P7-201ENST00000458300 517 ntBASIC1.8□□□□□ -2.12
RNF6Q9Y252 RNU7-180P-201ENST00000459240 63 ntBASIC1.8□□□□□ -2.12
RNF6Q9Y252 AC108078.1-201ENST00000508073 725 ntBASIC1.8□□□□□ -2.12
RNF6Q9Y252 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.8□□□□□ -2.12
RNF6Q9Y252 AC018630.3-201ENST00000542637 96 ntBASIC1.8□□□□□ -2.12
RNF6Q9Y252 AC007375.1-201ENST00000554513 578 ntBASIC1.8□□□□□ -2.12
RNF6Q9Y252 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.8□□□□□ -2.12
RNF6Q9Y252 MTCO3P23-201ENST00000561363 289 ntBASIC1.8□□□□□ -2.12
RNF6Q9Y252 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.8□□□□□ -2.12
RNF6Q9Y252 MIR3941-201ENST00000582572 103 ntBASIC1.8□□□□□ -2.12
RNF6Q9Y252 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.8□□□□□ -2.12
RNF6Q9Y252 AC012493.3-201ENST00000604494 112 ntBASIC1.8□□□□□ -2.12
RNF6Q9Y252 AC009509.4-201ENST00000619202 509 ntBASIC1.8□□□□□ -2.12
RNF6Q9Y252 SDR42E1P4-201ENST00000620894 481 ntBASIC1.8□□□□□ -2.12
RNF6Q9Y252 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
RNF6Q9Y252 AC008555.8-201ENST00000623602 2168 ntBASIC1.79□□□□□ -2.12
RNF6Q9Y252 RNU4-56P-201ENST00000364700 142 ntBASIC1.79□□□□□ -2.12
RNF6Q9Y252 Y_RNA.409-201ENST00000383990 98 ntBASIC1.79□□□□□ -2.12
RNF6Q9Y252 MIR29C-201ENST00000385231 88 ntBASIC1.79□□□□□ -2.12
RNF6Q9Y252 CYCSP49-201ENST00000420810 319 ntBASIC1.79□□□□□ -2.12
RNF6Q9Y252 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.79□□□□□ -2.12
RNF6Q9Y252 VN1R108P-201ENST00000431580 830 ntBASIC1.79□□□□□ -2.12
RNF6Q9Y252 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.79□□□□□ -2.12
RNF6Q9Y252 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.79□□□□□ -2.12
RNF6Q9Y252 AC013470.1-201ENST00000453438 462 ntBASIC1.79□□□□□ -2.12
RNF6Q9Y252 AC087884.1-201ENST00000469738 328 ntBASIC1.79□□□□□ -2.12
RNF6Q9Y252 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.79□□□□□ -2.12
RNF6Q9Y252 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.79□□□□□ -2.12
RNF6Q9Y252 AC093259.1-201ENST00000509755 300 ntBASIC1.79□□□□□ -2.12
RNF6Q9Y252 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.79□□□□□ -2.12
RNF6Q9Y252 SNORA31.16-201ENST00000516773 139 ntBASIC1.79□□□□□ -2.12
RNF6Q9Y252 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.79□□□□□ -2.12
RNF6Q9Y252 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.79□□□□□ -2.12
RNF6Q9Y252 AC243960.4-201ENST00000600532 288 ntBASIC1.79□□□□□ -2.12
RNF6Q9Y252 SNRPGP19-201ENST00000603826 189 ntBASIC1.79□□□□□ -2.12
RNF6Q9Y252 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.79□□□□□ -2.12
RNF6Q9Y252 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.79□□□□□ -2.12
RNF6Q9Y252 AC139792.3-201ENST00000623525 224 ntBASIC1.79□□□□□ -2.12
RNF6Q9Y252 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
RNF6Q9Y252 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
RNF6Q9Y252 RNU4-15P-201ENST00000362613 141 ntBASIC1.78□□□□□ -2.12
RNF6Q9Y252 RNU1-17P-201ENST00000363022 152 ntBASIC1.78□□□□□ -2.12
RNF6Q9Y252 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
RNF6Q9Y252 SNORD116-1-201ENST00000384335 95 ntBASIC1.78□□□□□ -2.12
RNF6Q9Y252 RNA5SP213-201ENST00000391031 106 ntBASIC1.78□□□□□ -2.12
RNF6Q9Y252 SNORA40.18-201ENST00000391200 128 ntBASIC1.78□□□□□ -2.12
RNF6Q9Y252 SRIP3-201ENST00000413200 219 ntBASIC1.78□□□□□ -2.12
RNF6Q9Y252 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.78□□□□□ -2.12
RNF6Q9Y252 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.78□□□□□ -2.12
RNF6Q9Y252 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.78□□□□□ -2.12
RNF6Q9Y252 AL353689.1-201ENST00000438895 199 ntBASIC1.78□□□□□ -2.12
RNF6Q9Y252 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.78□□□□□ -2.12
RNF6Q9Y252 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.78□□□□□ -2.12
RNF6Q9Y252 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.78□□□□□ -2.12
RNF6Q9Y252 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.78□□□□□ -2.12
RNF6Q9Y252 AC022447.4-201ENST00000504053 364 ntBASIC1.78□□□□□ -2.12
RNF6Q9Y252 RNA5SP182-201ENST00000516064 82 ntBASIC1.78□□□□□ -2.12
RNF6Q9Y252 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.78□□□□□ -2.12
RNF6Q9Y252 RNU6-1038P-201ENST00000516516 104 ntBASIC1.78□□□□□ -2.12
RNF6Q9Y252 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.78□□□□□ -2.12
RNF6Q9Y252 AK6P1-201ENST00000540219 478 ntBASIC1.78□□□□□ -2.12
RNF6Q9Y252 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.78□□□□□ -2.12
RNF6Q9Y252 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.78□□□□□ -2.12
RNF6Q9Y252 MIR3136-201ENST00000583498 78 ntBASIC1.78□□□□□ -2.12
RNF6Q9Y252 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.78□□□□□ -2.12
RNF6Q9Y252 AL109918.3-201ENST00000603072 338 ntBASIC1.78□□□□□ -2.12
RNF6Q9Y252 AC018889.1-201ENST00000605372 397 ntBASIC1.78□□□□□ -2.12
RNF6Q9Y252 AP000654.2-201ENST00000605633 586 ntBASIC1.78□□□□□ -2.12
RNF6Q9Y252 AP001596.2-201ENST00000608410 312 ntBASIC1.78□□□□□ -2.12
RNF6Q9Y252 HULC.1-201ENST00000612720 240 ntBASIC1.78□□□□□ -2.12
RNF6Q9Y252 AL359314.1-201ENST00000616913 261 ntBASIC1.78□□□□□ -2.12
RNF6Q9Y252 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
RNF6Q9Y252 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.77□□□□□ -2.13
RNF6Q9Y252 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.77□□□□□ -2.13
RNF6Q9Y252 RNU6-142P-201ENST00000384019 107 ntBASIC1.77□□□□□ -2.13
RNF6Q9Y252 SNORD116-2-201ENST00000384274 95 ntBASIC1.77□□□□□ -2.13
RNF6Q9Y252 RNU6-1119P-201ENST00000384349 108 ntBASIC1.77□□□□□ -2.13
RNF6Q9Y252 Y_RNA.504-201ENST00000384481 104 ntBASIC1.77□□□□□ -2.13
RNF6Q9Y252 SNORD116-6-201ENST00000384711 96 ntBASIC1.77□□□□□ -2.13
RNF6Q9Y252 MIR597-201ENST00000384968 97 ntBASIC1.77□□□□□ -2.13
RNF6Q9Y252 SNORD73A-201ENST00000386062 65 ntBASIC1.77□□□□□ -2.13
RNF6Q9Y252 RNU6-1106P-201ENST00000390845 107 ntBASIC1.77□□□□□ -2.13
RNF6Q9Y252 RPS29P13-201ENST00000402041 169 ntBASIC1.77□□□□□ -2.13
RNF6Q9Y252 AL663109.1-201ENST00000411498 844 ntBASIC1.77□□□□□ -2.13
RNF6Q9Y252 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.77□□□□□ -2.13
RNF6Q9Y252 AL445685.2-201ENST00000422551 342 ntBASIC1.77□□□□□ -2.13
RNF6Q9Y252 RPL23AP6-201ENST00000446637 472 ntBASIC1.77□□□□□ -2.13
RNF6Q9Y252 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.77□□□□□ -2.13
RNF6Q9Y252 RPL23AP3-201ENST00000453844 468 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms