Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 AC090525.1-201ENST00000479116 478 ntBASIC3.2□□□□□ -1.9
HDAC9Q9UKV0 SCARNA17.1-201ENST00000516211 143 ntBASIC3.2□□□□□ -1.9
HDAC9Q9UKV0 SCARNA17.2-201ENST00000516334 143 ntBASIC3.2□□□□□ -1.9
HDAC9Q9UKV0 RNU6-1213P-201ENST00000517075 94 ntBASIC3.2□□□□□ -1.9
HDAC9Q9UKV0 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.2□□□□□ -1.9
HDAC9Q9UKV0 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.2□□□□□ -1.9
HDAC9Q9UKV0 AC027176.1-201ENST00000560204 514 ntBASIC3.2□□□□□ -1.9
HDAC9Q9UKV0 AC009163.5-201ENST00000575421 637 ntBASIC3.2□□□□□ -1.9
HDAC9Q9UKV0 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.2□□□□□ -1.9
HDAC9Q9UKV0 MIR4506-201ENST00000584693 77 ntBASIC3.2□□□□□ -1.9
HDAC9Q9UKV0 MIR4719-201ENST00000585233 84 ntBASIC3.2□□□□□ -1.9
HDAC9Q9UKV0 AC009229.3-201ENST00000608056 282 ntBASIC3.2□□□□□ -1.9
HDAC9Q9UKV0 SCARNA17.4-201ENST00000614296 143 ntBASIC3.2□□□□□ -1.9
HDAC9Q9UKV0 AC126177.8-201ENST00000618339 1015 ntBASIC3.2□□□□□ -1.9
HDAC9Q9UKV0 AL669831.3-213ENST00000636676 183 ntBASIC3.2□□□□□ -1.9
HDAC9Q9UKV0 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HDAC9Q9UKV0 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HDAC9Q9UKV0 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HDAC9Q9UKV0 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
HDAC9Q9UKV0 AC080128.1-201ENST00000474389 1917 ntBASIC3.19□□□□□ -1.9
HDAC9Q9UKV0 Y_RNA.404-201ENST00000383978 102 ntBASIC3.19□□□□□ -1.9
HDAC9Q9UKV0 RNU6-842P-201ENST00000384269 107 ntBASIC3.19□□□□□ -1.9
HDAC9Q9UKV0 SNORA75.4-201ENST00000391278 119 ntBASIC3.19□□□□□ -1.9
HDAC9Q9UKV0 RNU6-1050P-201ENST00000410388 107 ntBASIC3.19□□□□□ -1.9
HDAC9Q9UKV0 AL135786.1-201ENST00000415892 214 ntBASIC3.19□□□□□ -1.9
HDAC9Q9UKV0 AC074117.2-201ENST00000417130 397 ntBASIC3.19□□□□□ -1.9
HDAC9Q9UKV0 MTCO2P27-201ENST00000420740 428 ntBASIC3.19□□□□□ -1.9
HDAC9Q9UKV0 MICF-203ENST00000432679 129 ntBASIC3.19□□□□□ -1.9
HDAC9Q9UKV0 RPS27AP9-201ENST00000477681 438 ntBASIC3.19□□□□□ -1.9
HDAC9Q9UKV0 RNA5SP458-201ENST00000516188 119 ntBASIC3.19□□□□□ -1.9
HDAC9Q9UKV0 RNA5SP282-201ENST00000516355 108 ntBASIC3.19□□□□□ -1.9
HDAC9Q9UKV0 Y_RNA.708-201ENST00000516950 96 ntBASIC3.19□□□□□ -1.9
HDAC9Q9UKV0 SNORA31.23-201ENST00000517219 133 ntBASIC3.19□□□□□ -1.9
HDAC9Q9UKV0 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.19□□□□□ -1.9
HDAC9Q9UKV0 AL356055.1-201ENST00000602528 446 ntBASIC3.19□□□□□ -1.9
HDAC9Q9UKV0 AC097372.5-201ENST00000623665 376 ntBASIC3.19□□□□□ -1.9
HDAC9Q9UKV0 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HDAC9Q9UKV0 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HDAC9Q9UKV0 AL355596.1-201ENST00000565399 3996 ntBASIC3.19□□□□□ -1.9
HDAC9Q9UKV0 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HDAC9Q9UKV0 Y_RNA.431-201ENST00000384086 102 ntBASIC3.18□□□□□ -1.9
HDAC9Q9UKV0 RNU6-843P-201ENST00000384454 104 ntBASIC3.18□□□□□ -1.9
HDAC9Q9UKV0 RNU6-310P-201ENST00000384655 107 ntBASIC3.18□□□□□ -1.9
HDAC9Q9UKV0 SNORA26.7-201ENST00000391288 122 ntBASIC3.18□□□□□ -1.9
HDAC9Q9UKV0 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HDAC9Q9UKV0 RNU4-53P-201ENST00000410828 140 ntBASIC3.18□□□□□ -1.9
HDAC9Q9UKV0 RPL19P1-201ENST00000411635 428 ntBASIC3.18□□□□□ -1.9
HDAC9Q9UKV0 AL451074.5-201ENST00000415894 435 ntBASIC3.18□□□□□ -1.9
HDAC9Q9UKV0 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HDAC9Q9UKV0 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.18□□□□□ -1.9
HDAC9Q9UKV0 AL445687.1-201ENST00000439946 251 ntBASIC3.18□□□□□ -1.9
HDAC9Q9UKV0 RPS29P27-201ENST00000463711 170 ntBASIC3.18□□□□□ -1.9
HDAC9Q9UKV0 AP001025.1-201ENST00000486139 332 ntBASIC3.18□□□□□ -1.9
HDAC9Q9UKV0 RPL23AP49-201ENST00000492925 468 ntBASIC3.18□□□□□ -1.9
HDAC9Q9UKV0 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.18□□□□□ -1.9
HDAC9Q9UKV0 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.18□□□□□ -1.9
HDAC9Q9UKV0 AC109329.2-201ENST00000519658 482 ntBASIC3.18□□□□□ -1.9
HDAC9Q9UKV0 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.18□□□□□ -1.9
HDAC9Q9UKV0 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HDAC9Q9UKV0 MIR3605-201ENST00000583214 100 ntBASIC3.18□□□□□ -1.9
HDAC9Q9UKV0 MIR5690-201ENST00000583739 73 ntBASIC3.18□□□□□ -1.9
HDAC9Q9UKV0 BNIP3P16-201ENST00000589779 534 ntBASIC3.18□□□□□ -1.9
HDAC9Q9UKV0 AC044792.1-201ENST00000593294 196 ntBASIC3.18□□□□□ -1.9
HDAC9Q9UKV0 MIR3976-201ENST00000606807 139 ntBASIC3.18□□□□□ -1.9
HDAC9Q9UKV0 AC084781.2-201ENST00000615568 161 ntBASIC3.18□□□□□ -1.9
HDAC9Q9UKV0 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.18□□□□□ -1.9
HDAC9Q9UKV0 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.18□□□□□ -1.9
HDAC9Q9UKV0 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
HDAC9Q9UKV0 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
HDAC9Q9UKV0 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HDAC9Q9UKV0 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.17□□□□□ -1.9
HDAC9Q9UKV0 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.17□□□□□ -1.9
HDAC9Q9UKV0 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
HDAC9Q9UKV0 RNU6-858P-201ENST00000362436 107 ntBASIC3.17□□□□□ -1.9
HDAC9Q9UKV0 U8.8-201ENST00000365399 135 ntBASIC3.17□□□□□ -1.9
HDAC9Q9UKV0 RNU6-790P-201ENST00000384479 105 ntBASIC3.17□□□□□ -1.9
HDAC9Q9UKV0 Y_RNA.646-201ENST00000410980 101 ntBASIC3.17□□□□□ -1.9
HDAC9Q9UKV0 PTGES3P4-201ENST00000426243 356 ntBASIC3.17□□□□□ -1.9
HDAC9Q9UKV0 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.17□□□□□ -1.9
HDAC9Q9UKV0 AC243964.1-201ENST00000441814 261 ntBASIC3.17□□□□□ -1.9
HDAC9Q9UKV0 AC007969.2-201ENST00000441891 191 ntBASIC3.17□□□□□ -1.9
HDAC9Q9UKV0 MTCO3P10-201ENST00000455912 772 ntBASIC3.17□□□□□ -1.9
HDAC9Q9UKV0 ELOCP24-201ENST00000456370 334 ntBASIC3.17□□□□□ -1.9
HDAC9Q9UKV0 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.17□□□□□ -1.9
HDAC9Q9UKV0 U8.21-201ENST00000459536 136 ntBASIC3.17□□□□□ -1.9
HDAC9Q9UKV0 AC133134.1-201ENST00000466800 359 ntBASIC3.17□□□□□ -1.9
HDAC9Q9UKV0 RPL7P42-201ENST00000481005 679 ntBASIC3.17□□□□□ -1.9
HDAC9Q9UKV0 AC005741.1-201ENST00000511094 432 ntBASIC3.17□□□□□ -1.9
HDAC9Q9UKV0 RNU6-612P-201ENST00000516909 102 ntBASIC3.17□□□□□ -1.9
HDAC9Q9UKV0 MIR3117-201ENST00000584034 78 ntBASIC3.17□□□□□ -1.9
HDAC9Q9UKV0 AL356280.1-201ENST00000603614 379 ntBASIC3.17□□□□□ -1.9
HDAC9Q9UKV0 AL449363.1-201ENST00000617815 186 ntBASIC3.17□□□□□ -1.9
HDAC9Q9UKV0 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.17□□□□□ -1.9
HDAC9Q9UKV0 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HDAC9Q9UKV0 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.16□□□□□ -1.9
HDAC9Q9UKV0 RNU6-527P-201ENST00000363425 104 ntBASIC3.16□□□□□ -1.9
HDAC9Q9UKV0 Y_RNA.164-201ENST00000363709 102 ntBASIC3.16□□□□□ -1.9
HDAC9Q9UKV0 Y_RNA.315-201ENST00000365117 102 ntBASIC3.16□□□□□ -1.9
HDAC9Q9UKV0 RNU6-596P-201ENST00000365395 98 ntBASIC3.16□□□□□ -1.9
HDAC9Q9UKV0 RNU6-43P-201ENST00000384302 107 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms