Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.25□□□□□ -1.89
CDC42EP3Q9UKI2 MIR3136-201ENST00000583498 78 ntBASIC3.25□□□□□ -1.89
CDC42EP3Q9UKI2 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.25□□□□□ -1.89
CDC42EP3Q9UKI2 AL356575.1-201ENST00000603008 283 ntBASIC3.25□□□□□ -1.89
CDC42EP3Q9UKI2 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.25□□□□□ -1.89
CDC42EP3Q9UKI2 AC010999.1-201ENST00000611856 324 ntBASIC3.25□□□□□ -1.89
CDC42EP3Q9UKI2 AL357075.2-201ENST00000614906 189 ntBASIC3.25□□□□□ -1.89
CDC42EP3Q9UKI2 U6.105-201ENST00000637379 88 ntBASIC3.25□□□□□ -1.89
CDC42EP3Q9UKI2 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.25□□□□□ -1.89
CDC42EP3Q9UKI2 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CDC42EP3Q9UKI2 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CDC42EP3Q9UKI2 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CDC42EP3Q9UKI2 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.25□□□□□ -1.89
CDC42EP3Q9UKI2 RNU6-799P-201ENST00000363567 107 ntBASIC3.24□□□□□ -1.89
CDC42EP3Q9UKI2 RNU6-198P-201ENST00000384258 104 ntBASIC3.24□□□□□ -1.89
CDC42EP3Q9UKI2 U8.11-201ENST00000384699 133 ntBASIC3.24□□□□□ -1.89
CDC42EP3Q9UKI2 U8.12-201ENST00000384701 133 ntBASIC3.24□□□□□ -1.89
CDC42EP3Q9UKI2 RNU6-19P-201ENST00000384718 107 ntBASIC3.24□□□□□ -1.89
CDC42EP3Q9UKI2 Y_RNA.569-201ENST00000384749 103 ntBASIC3.24□□□□□ -1.89
CDC42EP3Q9UKI2 RNU4-30P-201ENST00000410245 143 ntBASIC3.24□□□□□ -1.89
CDC42EP3Q9UKI2 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.24□□□□□ -1.89
CDC42EP3Q9UKI2 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.24□□□□□ -1.89
CDC42EP3Q9UKI2 AC010095.1-201ENST00000443543 144 ntBASIC3.24□□□□□ -1.89
CDC42EP3Q9UKI2 CYCSP35-201ENST00000451978 304 ntBASIC3.24□□□□□ -1.89
CDC42EP3Q9UKI2 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.24□□□□□ -1.89
CDC42EP3Q9UKI2 U8.18-201ENST00000459285 133 ntBASIC3.24□□□□□ -1.89
CDC42EP3Q9UKI2 snoU13.14-201ENST00000459372 104 ntBASIC3.24□□□□□ -1.89
CDC42EP3Q9UKI2 AP002884.2-201ENST00000471647 395 ntBASIC3.24□□□□□ -1.89
CDC42EP3Q9UKI2 AIG1P1-201ENST00000503376 148 ntBASIC3.24□□□□□ -1.89
CDC42EP3Q9UKI2 RN7SKP18-201ENST00000516005 275 ntBASIC3.24□□□□□ -1.89
CDC42EP3Q9UKI2 RNA5SP179-201ENST00000517284 121 ntBASIC3.24□□□□□ -1.89
CDC42EP3Q9UKI2 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.24□□□□□ -1.89
CDC42EP3Q9UKI2 CBX3P4-201ENST00000538909 354 ntBASIC3.24□□□□□ -1.89
CDC42EP3Q9UKI2 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.24□□□□□ -1.89
CDC42EP3Q9UKI2 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.24□□□□□ -1.89
CDC42EP3Q9UKI2 CYP4A27P-201ENST00000567218 190 ntBASIC3.24□□□□□ -1.89
CDC42EP3Q9UKI2 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.24□□□□□ -1.89
CDC42EP3Q9UKI2 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.24□□□□□ -1.89
CDC42EP3Q9UKI2 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.24□□□□□ -1.89
CDC42EP3Q9UKI2 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CDC42EP3Q9UKI2 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CDC42EP3Q9UKI2 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CDC42EP3Q9UKI2 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
CDC42EP3Q9UKI2 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CDC42EP3Q9UKI2 AP003122.5-201ENST00000527668 3766 ntBASIC3.24□□□□□ -1.89
CDC42EP3Q9UKI2 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CDC42EP3Q9UKI2 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDC42EP3Q9UKI2 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.23□□□□□ -1.89
CDC42EP3Q9UKI2 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDC42EP3Q9UKI2 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CDC42EP3Q9UKI2 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.23□□□□□ -1.89
CDC42EP3Q9UKI2 AC000403.1-201ENST00000613696 3585 ntBASIC3.23□□□□□ -1.89
CDC42EP3Q9UKI2 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CDC42EP3Q9UKI2 RNU6-1010P-201ENST00000362757 107 ntBASIC3.23□□□□□ -1.89
CDC42EP3Q9UKI2 Y_RNA.83-201ENST00000363005 113 ntBASIC3.23□□□□□ -1.89
CDC42EP3Q9UKI2 Y_RNA.136-201ENST00000363444 102 ntBASIC3.23□□□□□ -1.89
CDC42EP3Q9UKI2 SNORD6-201ENST00000365444 73 ntBASIC3.23□□□□□ -1.89
CDC42EP3Q9UKI2 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDC42EP3Q9UKI2 RNU6-245P-201ENST00000384020 107 ntBASIC3.23□□□□□ -1.89
CDC42EP3Q9UKI2 Y_RNA.446-201ENST00000384178 104 ntBASIC3.23□□□□□ -1.89
CDC42EP3Q9UKI2 Y_RNA.595-201ENST00000410403 105 ntBASIC3.23□□□□□ -1.89
CDC42EP3Q9UKI2 AL035423.1-201ENST00000420331 213 ntBASIC3.23□□□□□ -1.89
CDC42EP3Q9UKI2 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.23□□□□□ -1.89
CDC42EP3Q9UKI2 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.23□□□□□ -1.89
CDC42EP3Q9UKI2 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.23□□□□□ -1.89
CDC42EP3Q9UKI2 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.23□□□□□ -1.89
CDC42EP3Q9UKI2 RN7SL93P-201ENST00000463035 293 ntBASIC3.23□□□□□ -1.89
CDC42EP3Q9UKI2 COX6CP14-201ENST00000469580 174 ntBASIC3.23□□□□□ -1.89
CDC42EP3Q9UKI2 RN7SL293P-201ENST00000481765 281 ntBASIC3.23□□□□□ -1.89
CDC42EP3Q9UKI2 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.23□□□□□ -1.89
CDC42EP3Q9UKI2 AC074133.1-201ENST00000515696 183 ntBASIC3.23□□□□□ -1.89
CDC42EP3Q9UKI2 RNU5F-2P-201ENST00000516066 82 ntBASIC3.23□□□□□ -1.89
CDC42EP3Q9UKI2 RNA5SP164-201ENST00000516533 110 ntBASIC3.23□□□□□ -1.89
CDC42EP3Q9UKI2 RNU7-110P-201ENST00000516891 62 ntBASIC3.23□□□□□ -1.89
CDC42EP3Q9UKI2 AP000867.2-201ENST00000532468 320 ntBASIC3.23□□□□□ -1.89
CDC42EP3Q9UKI2 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.23□□□□□ -1.89
CDC42EP3Q9UKI2 AC005000.2-201ENST00000605468 310 ntBASIC3.23□□□□□ -1.89
CDC42EP3Q9UKI2 SNORD98-201ENST00000636377 67 ntBASIC3.23□□□□□ -1.89
CDC42EP3Q9UKI2 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDC42EP3Q9UKI2 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDC42EP3Q9UKI2 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDC42EP3Q9UKI2 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDC42EP3Q9UKI2 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
CDC42EP3Q9UKI2 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDC42EP3Q9UKI2 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CDC42EP3Q9UKI2 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CDC42EP3Q9UKI2 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
CDC42EP3Q9UKI2 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CDC42EP3Q9UKI2 UBE2WP1-201ENST00000362030 340 ntBASIC3.22□□□□□ -1.89
CDC42EP3Q9UKI2 RNU6-1175P-201ENST00000365200 107 ntBASIC3.22□□□□□ -1.89
CDC42EP3Q9UKI2 RNU6-886P-201ENST00000384319 105 ntBASIC3.22□□□□□ -1.89
CDC42EP3Q9UKI2 RNU6-21P-201ENST00000384710 107 ntBASIC3.22□□□□□ -1.89
CDC42EP3Q9UKI2 MIR218-2-201ENST00000385006 110 ntBASIC3.22□□□□□ -1.89
CDC42EP3Q9UKI2 RNU6-1140P-201ENST00000410517 106 ntBASIC3.22□□□□□ -1.89
CDC42EP3Q9UKI2 RNA5SP38-201ENST00000410750 119 ntBASIC3.22□□□□□ -1.89
CDC42EP3Q9UKI2 AC096649.2-201ENST00000416186 393 ntBASIC3.22□□□□□ -1.89
CDC42EP3Q9UKI2 ARF4P2-201ENST00000430209 526 ntBASIC3.22□□□□□ -1.89
CDC42EP3Q9UKI2 TBCAP1-201ENST00000436520 327 ntBASIC3.22□□□□□ -1.89
CDC42EP3Q9UKI2 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.22□□□□□ -1.89
CDC42EP3Q9UKI2 AC107626.1-201ENST00000471084 183 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms