Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 RNU6-116P-201ENST00000384042 109 ntBASIC2.3□□□□□ -2.04
CLIP2Q9UDT6 SNORA32.2-201ENST00000384049 122 ntBASIC2.3□□□□□ -2.04
CLIP2Q9UDT6 RNU6-767P-201ENST00000384132 107 ntBASIC2.3□□□□□ -2.04
CLIP2Q9UDT6 FTH1P15-201ENST00000406984 280 ntBASIC2.3□□□□□ -2.04
CLIP2Q9UDT6 Y_RNA.615-201ENST00000410769 117 ntBASIC2.3□□□□□ -2.04
CLIP2Q9UDT6 RNU2-63P-201ENST00000410792 194 ntBASIC2.3□□□□□ -2.04
CLIP2Q9UDT6 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.3□□□□□ -2.04
CLIP2Q9UDT6 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.3□□□□□ -2.04
CLIP2Q9UDT6 AL513185.2-201ENST00000425543 193 ntBASIC2.3□□□□□ -2.04
CLIP2Q9UDT6 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.3□□□□□ -2.04
CLIP2Q9UDT6 SEPT14P3-201ENST00000439401 183 ntBASIC2.3□□□□□ -2.04
CLIP2Q9UDT6 AL732372.2-207ENST00000445840 183 ntBASIC2.3□□□□□ -2.04
CLIP2Q9UDT6 AL136380.1-201ENST00000447970 162 ntBASIC2.3□□□□□ -2.04
CLIP2Q9UDT6 SEPT14P2-201ENST00000453405 183 ntBASIC2.3□□□□□ -2.04
CLIP2Q9UDT6 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.3□□□□□ -2.04
CLIP2Q9UDT6 AC006512.1-201ENST00000468816 291 ntBASIC2.3□□□□□ -2.04
CLIP2Q9UDT6 RPL23AP42-201ENST00000471152 471 ntBASIC2.3□□□□□ -2.04
CLIP2Q9UDT6 AC011005.2-201ENST00000487324 359 ntBASIC2.3□□□□□ -2.04
CLIP2Q9UDT6 SEPT14P4-201ENST00000513445 186 ntBASIC2.3□□□□□ -2.04
CLIP2Q9UDT6 RNU6-123P-201ENST00000516163 102 ntBASIC2.3□□□□□ -2.04
CLIP2Q9UDT6 RNU7-30P-201ENST00000516835 62 ntBASIC2.3□□□□□ -2.04
CLIP2Q9UDT6 RNU6-295P-201ENST00000516901 104 ntBASIC2.3□□□□□ -2.04
CLIP2Q9UDT6 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.3□□□□□ -2.04
CLIP2Q9UDT6 FO082796.1-201ENST00000523795 183 ntBASIC2.3□□□□□ -2.04
CLIP2Q9UDT6 AP005597.4-201ENST00000526762 229 ntBASIC2.3□□□□□ -2.04
CLIP2Q9UDT6 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.3□□□□□ -2.04
CLIP2Q9UDT6 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.3□□□□□ -2.04
CLIP2Q9UDT6 AL355375.2-201ENST00000574825 175 ntBASIC2.3□□□□□ -2.04
CLIP2Q9UDT6 MIR5583-1-201ENST00000580941 59 ntBASIC2.3□□□□□ -2.04
CLIP2Q9UDT6 AC011712.1-201ENST00000588959 234 ntBASIC2.3□□□□□ -2.04
CLIP2Q9UDT6 AC126177.8-201ENST00000618339 1015 ntBASIC2.3□□□□□ -2.04
CLIP2Q9UDT6 RNU6-61P-201ENST00000365528 109 ntBASIC2.29□□□□□ -2.04
CLIP2Q9UDT6 RNU6-641P-201ENST00000384006 107 ntBASIC2.29□□□□□ -2.04
CLIP2Q9UDT6 SNORA40.18-201ENST00000391200 128 ntBASIC2.29□□□□□ -2.04
CLIP2Q9UDT6 RNU6-387P-201ENST00000411331 105 ntBASIC2.29□□□□□ -2.04
CLIP2Q9UDT6 SNRPEP10-201ENST00000420249 274 ntBASIC2.29□□□□□ -2.04
CLIP2Q9UDT6 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.29□□□□□ -2.04
CLIP2Q9UDT6 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.29□□□□□ -2.04
CLIP2Q9UDT6 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.29□□□□□ -2.04
CLIP2Q9UDT6 FGF7P4-201ENST00000509595 295 ntBASIC2.29□□□□□ -2.04
CLIP2Q9UDT6 SMURF2P1-201ENST00000514992 481 ntBASIC2.29□□□□□ -2.04
CLIP2Q9UDT6 SNORA25.11-201ENST00000515935 105 ntBASIC2.29□□□□□ -2.04
CLIP2Q9UDT6 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.29□□□□□ -2.04
CLIP2Q9UDT6 AP003072.2-201ENST00000527756 676 ntBASIC2.29□□□□□ -2.04
CLIP2Q9UDT6 AL118558.2-201ENST00000556294 238 ntBASIC2.29□□□□□ -2.04
CLIP2Q9UDT6 AC110588.1-201ENST00000559699 137 ntBASIC2.29□□□□□ -2.04
CLIP2Q9UDT6 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.29□□□□□ -2.04
CLIP2Q9UDT6 MIR548AC-201ENST00000585049 88 ntBASIC2.29□□□□□ -2.04
CLIP2Q9UDT6 AC008749.1-201ENST00000597650 306 ntBASIC2.29□□□□□ -2.04
CLIP2Q9UDT6 AL158032.1-201ENST00000605401 106 ntBASIC2.29□□□□□ -2.04
CLIP2Q9UDT6 AC025754.2-201ENST00000606491 432 ntBASIC2.29□□□□□ -2.04
CLIP2Q9UDT6 AC009248.2-201ENST00000619826 254 ntBASIC2.29□□□□□ -2.04
CLIP2Q9UDT6 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.29□□□□□ -2.04
CLIP2Q9UDT6 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
CLIP2Q9UDT6 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
CLIP2Q9UDT6 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CLIP2Q9UDT6 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.28□□□□□ -2.04
CLIP2Q9UDT6 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.28□□□□□ -2.04
CLIP2Q9UDT6 RNU1-72P-201ENST00000362976 153 ntBASIC2.28□□□□□ -2.04
CLIP2Q9UDT6 RNU6-1120P-201ENST00000362988 108 ntBASIC2.28□□□□□ -2.04
CLIP2Q9UDT6 Y_RNA.216-201ENST00000364205 93 ntBASIC2.28□□□□□ -2.04
CLIP2Q9UDT6 Y_RNA.474-201ENST00000384341 102 ntBASIC2.28□□□□□ -2.04
CLIP2Q9UDT6 MT-TD-201ENST00000387419 68 ntBASIC2.28□□□□□ -2.04
CLIP2Q9UDT6 CISD1P1-201ENST00000393907 327 ntBASIC2.28□□□□□ -2.04
CLIP2Q9UDT6 RNU6-1304P-201ENST00000411374 106 ntBASIC2.28□□□□□ -2.04
CLIP2Q9UDT6 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.28□□□□□ -2.04
CLIP2Q9UDT6 AL365400.1-201ENST00000431854 640 ntBASIC2.28□□□□□ -2.04
CLIP2Q9UDT6 GPR143P-201ENST00000434155 205 ntBASIC2.28□□□□□ -2.04
CLIP2Q9UDT6 MTATP6P16-201ENST00000434543 526 ntBASIC2.28□□□□□ -2.04
CLIP2Q9UDT6 AC073415.1-201ENST00000449240 153 ntBASIC2.28□□□□□ -2.04
CLIP2Q9UDT6 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.28□□□□□ -2.04
CLIP2Q9UDT6 RPS29P15-201ENST00000458329 171 ntBASIC2.28□□□□□ -2.04
CLIP2Q9UDT6 AC068781.1-201ENST00000488231 618 ntBASIC2.28□□□□□ -2.04
CLIP2Q9UDT6 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.28□□□□□ -2.04
CLIP2Q9UDT6 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.28□□□□□ -2.04
CLIP2Q9UDT6 RNU4-49P-201ENST00000516080 140 ntBASIC2.28□□□□□ -2.04
CLIP2Q9UDT6 RNU6-1038P-201ENST00000516516 104 ntBASIC2.28□□□□□ -2.04
CLIP2Q9UDT6 AP005435.4-201ENST00000529514 284 ntBASIC2.28□□□□□ -2.04
CLIP2Q9UDT6 AP003072.1-201ENST00000531740 145 ntBASIC2.28□□□□□ -2.04
CLIP2Q9UDT6 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.28□□□□□ -2.04
CLIP2Q9UDT6 OR11H5P-201ENST00000554039 926 ntBASIC2.28□□□□□ -2.04
CLIP2Q9UDT6 DEFB122-202ENST00000569013 197 ntBASIC2.28□□□□□ -2.04
CLIP2Q9UDT6 AC008521.1-201ENST00000587471 187 ntBASIC2.28□□□□□ -2.04
CLIP2Q9UDT6 AC098848.2-201ENST00000588023 330 ntBASIC2.28□□□□□ -2.04
CLIP2Q9UDT6 CTHRC1P1-201ENST00000605383 469 ntBASIC2.28□□□□□ -2.04
CLIP2Q9UDT6 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.28□□□□□ -2.04
CLIP2Q9UDT6 AP006437.1-201ENST00000641440 3685 ntBASIC2.28□□□□□ -2.04
CLIP2Q9UDT6 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
CLIP2Q9UDT6 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.27□□□□□ -2.05
CLIP2Q9UDT6 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CLIP2Q9UDT6 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CLIP2Q9UDT6 Y_RNA.72-201ENST00000362894 103 ntBASIC2.27□□□□□ -2.05
CLIP2Q9UDT6 SNORD14B-201ENST00000364533 90 ntBASIC2.27□□□□□ -2.05
CLIP2Q9UDT6 RNU6-108P-201ENST00000365558 107 ntBASIC2.27□□□□□ -2.05
CLIP2Q9UDT6 RNU6-72P-201ENST00000384285 79 ntBASIC2.27□□□□□ -2.05
CLIP2Q9UDT6 RNU1-148P-201ENST00000384472 162 ntBASIC2.27□□□□□ -2.05
CLIP2Q9UDT6 RNU6-831P-201ENST00000384548 107 ntBASIC2.27□□□□□ -2.05
CLIP2Q9UDT6 MIR583-201ENST00000384846 75 ntBASIC2.27□□□□□ -2.05
CLIP2Q9UDT6 RNU6-1140P-201ENST00000410517 106 ntBASIC2.27□□□□□ -2.05
CLIP2Q9UDT6 RNU4-14P-201ENST00000410858 122 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms