Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 RNU6-567P-201ENST00000516746 107 ntBASIC3.8□□□□□ -1.8
USP35Q9P2H5 SNORD53-201ENST00000579969 78 ntBASIC3.8□□□□□ -1.8
USP35Q9P2H5 FGF7P1-201ENST00000582820 288 ntBASIC3.8□□□□□ -1.8
USP35Q9P2H5 AL034555.1-201ENST00000604816 211 ntBASIC3.8□□□□□ -1.8
USP35Q9P2H5 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.8□□□□□ -1.8
USP35Q9P2H5 AL359198.2-201ENST00000611836 194 ntBASIC3.8□□□□□ -1.8
USP35Q9P2H5 MIR6817-201ENST00000615588 66 ntBASIC3.8□□□□□ -1.8
USP35Q9P2H5 AC064859.1-201ENST00000624741 174 ntBASIC3.8□□□□□ -1.8
USP35Q9P2H5 TPTEP1-208ENST00000636884 213 ntBASIC3.8□□□□□ -1.8
USP35Q9P2H5 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.8□□□□□ -1.8
USP35Q9P2H5 Y_RNA.184-201ENST00000363884 108 ntBASIC3.79□□□□□ -1.8
USP35Q9P2H5 RNA5SP68-201ENST00000363885 119 ntBASIC3.79□□□□□ -1.8
USP35Q9P2H5 MIR504-201ENST00000385065 83 ntBASIC3.79□□□□□ -1.8
USP35Q9P2H5 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
USP35Q9P2H5 MIR548F5-201ENST00000408421 86 ntBASIC3.79□□□□□ -1.8
USP35Q9P2H5 MTND4LP11-201ENST00000422184 280 ntBASIC3.79□□□□□ -1.8
USP35Q9P2H5 AL590135.1-201ENST00000422215 156 ntBASIC3.79□□□□□ -1.8
USP35Q9P2H5 AC019205.3-201ENST00000424573 156 ntBASIC3.79□□□□□ -1.8
USP35Q9P2H5 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.79□□□□□ -1.8
USP35Q9P2H5 RPS29P6-201ENST00000438196 145 ntBASIC3.79□□□□□ -1.8
USP35Q9P2H5 MTATP6P23-201ENST00000440153 476 ntBASIC3.79□□□□□ -1.8
USP35Q9P2H5 AC016700.2-201ENST00000446011 156 ntBASIC3.79□□□□□ -1.8
USP35Q9P2H5 MTND5P20-201ENST00000448677 143 ntBASIC3.79□□□□□ -1.8
USP35Q9P2H5 AC090515.1-201ENST00000465295 476 ntBASIC3.79□□□□□ -1.8
USP35Q9P2H5 AC090525.1-201ENST00000479116 478 ntBASIC3.79□□□□□ -1.8
USP35Q9P2H5 AC015911.1-201ENST00000495111 156 ntBASIC3.79□□□□□ -1.8
USP35Q9P2H5 AC091874.1-201ENST00000511402 339 ntBASIC3.79□□□□□ -1.8
USP35Q9P2H5 RNA5SP148-201ENST00000516527 94 ntBASIC3.79□□□□□ -1.8
USP35Q9P2H5 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
USP35Q9P2H5 MIR3976-201ENST00000606807 139 ntBASIC3.79□□□□□ -1.8
USP35Q9P2H5 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.79□□□□□ -1.8
USP35Q9P2H5 AC092794.2-201ENST00000620933 563 ntBASIC3.79□□□□□ -1.8
USP35Q9P2H5 U8.2-201ENST00000363156 134 ntBASIC3.78□□□□□ -1.8
USP35Q9P2H5 Y_RNA.504-201ENST00000384481 104 ntBASIC3.78□□□□□ -1.8
USP35Q9P2H5 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.78□□□□□ -1.8
USP35Q9P2H5 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.78□□□□□ -1.8
USP35Q9P2H5 GPM6BP3-201ENST00000442797 145 ntBASIC3.78□□□□□ -1.8
USP35Q9P2H5 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.78□□□□□ -1.8
USP35Q9P2H5 AL353752.1-201ENST00000454946 260 ntBASIC3.78□□□□□ -1.8
USP35Q9P2H5 CKS1BP2-201ENST00000497342 240 ntBASIC3.78□□□□□ -1.8
USP35Q9P2H5 RNA5SP24-201ENST00000516478 95 ntBASIC3.78□□□□□ -1.8
USP35Q9P2H5 SNORA48.11-201ENST00000517015 89 ntBASIC3.78□□□□□ -1.8
USP35Q9P2H5 RNU6-586P-201ENST00000517265 104 ntBASIC3.78□□□□□ -1.8
USP35Q9P2H5 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.78□□□□□ -1.8
USP35Q9P2H5 AC025253.1-201ENST00000613623 543 ntBASIC3.78□□□□□ -1.8
USP35Q9P2H5 U4atac.1-201ENST00000618345 95 ntBASIC3.78□□□□□ -1.8
USP35Q9P2H5 AL450472.1-202ENST00000637286 180 ntBASIC3.78□□□□□ -1.8
USP35Q9P2H5 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
USP35Q9P2H5 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.78□□□□□ -1.8
USP35Q9P2H5 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.78□□□□□ -1.8
USP35Q9P2H5 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
USP35Q9P2H5 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
USP35Q9P2H5 RNA5SP125-201ENST00000364843 120 ntBASIC3.77□□□□□ -1.81
USP35Q9P2H5 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
USP35Q9P2H5 AL138827.1-201ENST00000402666 306 ntBASIC3.77□□□□□ -1.81
USP35Q9P2H5 AL591034.2-201ENST00000402839 359 ntBASIC3.77□□□□□ -1.81
USP35Q9P2H5 AL451074.5-201ENST00000415894 435 ntBASIC3.77□□□□□ -1.81
USP35Q9P2H5 EIF4EP2-201ENST00000422816 654 ntBASIC3.77□□□□□ -1.81
USP35Q9P2H5 MRPL50P4-201ENST00000446432 475 ntBASIC3.77□□□□□ -1.81
USP35Q9P2H5 SNORD5.1-201ENST00000458800 75 ntBASIC3.77□□□□□ -1.81
USP35Q9P2H5 AC008549.1-201ENST00000512900 643 ntBASIC3.77□□□□□ -1.81
USP35Q9P2H5 RNU6-826P-201ENST00000516827 104 ntBASIC3.77□□□□□ -1.81
USP35Q9P2H5 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.77□□□□□ -1.81
USP35Q9P2H5 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.77□□□□□ -1.81
USP35Q9P2H5 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.77□□□□□ -1.81
USP35Q9P2H5 MIR6128-201ENST00000615528 109 ntBASIC3.77□□□□□ -1.81
USP35Q9P2H5 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.77□□□□□ -1.81
USP35Q9P2H5 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
USP35Q9P2H5 AC096644.4-201ENST00000563417 2912 ntBASIC3.76□□□□□ -1.81
USP35Q9P2H5 Y_RNA.123-201ENST00000363338 102 ntBASIC3.76□□□□□ -1.81
USP35Q9P2H5 RNU6-1286P-201ENST00000383871 107 ntBASIC3.76□□□□□ -1.81
USP35Q9P2H5 RNU1-109P-201ENST00000383960 147 ntBASIC3.76□□□□□ -1.81
USP35Q9P2H5 AL356432.1-201ENST00000405809 419 ntBASIC3.76□□□□□ -1.81
USP35Q9P2H5 RPL37P10-201ENST00000412884 288 ntBASIC3.76□□□□□ -1.81
USP35Q9P2H5 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.76□□□□□ -1.81
USP35Q9P2H5 RPS3AP52-201ENST00000435639 297 ntBASIC3.76□□□□□ -1.81
USP35Q9P2H5 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.76□□□□□ -1.81
USP35Q9P2H5 RPS27AP9-201ENST00000477681 438 ntBASIC3.76□□□□□ -1.81
USP35Q9P2H5 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.76□□□□□ -1.81
USP35Q9P2H5 RN7SKP24-201ENST00000515888 284 ntBASIC3.76□□□□□ -1.81
USP35Q9P2H5 RNU6-1016P-201ENST00000516689 94 ntBASIC3.76□□□□□ -1.81
USP35Q9P2H5 Y_RNA.702-201ENST00000516843 96 ntBASIC3.76□□□□□ -1.81
USP35Q9P2H5 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.76□□□□□ -1.81
USP35Q9P2H5 AC099654.5-201ENST00000636479 350 ntBASIC3.76□□□□□ -1.81
USP35Q9P2H5 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
USP35Q9P2H5 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
USP35Q9P2H5 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.76□□□□□ -1.81
USP35Q9P2H5 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
USP35Q9P2H5 MTND4P12-201ENST00000498999 1377 ntBASIC3.76□□□□□ -1.81
USP35Q9P2H5 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
USP35Q9P2H5 AC069528.2-201ENST00000624849 1991 ntBASIC3.75□□□□□ -1.81
USP35Q9P2H5 Y_RNA.142-201ENST00000363491 102 ntBASIC3.75□□□□□ -1.81
USP35Q9P2H5 Y_RNA.482-201ENST00000384377 111 ntBASIC3.75□□□□□ -1.81
USP35Q9P2H5 RNA5SP274-201ENST00000410484 108 ntBASIC3.75□□□□□ -1.81
USP35Q9P2H5 AL590556.1-201ENST00000423231 483 ntBASIC3.75□□□□□ -1.81
USP35Q9P2H5 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.75□□□□□ -1.81
USP35Q9P2H5 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.75□□□□□ -1.81
USP35Q9P2H5 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.75□□□□□ -1.81
USP35Q9P2H5 SNORA31.16-201ENST00000516773 139 ntBASIC3.75□□□□□ -1.81
USP35Q9P2H5 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms