Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.85□□□□□ -2.27
CCDC88CQ9P219 AC006026.2-201ENST00000457376 180 ntBASIC0.85□□□□□ -2.27
CCDC88CQ9P219 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.85□□□□□ -2.27
CCDC88CQ9P219 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.85□□□□□ -2.27
CCDC88CQ9P219 AC093259.1-201ENST00000509755 300 ntBASIC0.85□□□□□ -2.27
CCDC88CQ9P219 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.85□□□□□ -2.27
CCDC88CQ9P219 SNORA31.16-201ENST00000516773 139 ntBASIC0.85□□□□□ -2.27
CCDC88CQ9P219 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.85□□□□□ -2.27
CCDC88CQ9P219 RRN3P3-201ENST00000549207 578 ntBASIC0.85□□□□□ -2.27
CCDC88CQ9P219 AP002360.4-201ENST00000606980 481 ntBASIC0.85□□□□□ -2.27
CCDC88CQ9P219 RMST_4.1-201ENST00000616886 107 ntBASIC0.85□□□□□ -2.27
CCDC88CQ9P219 AF246928.1-201ENST00000623768 87 ntBASIC0.85□□□□□ -2.27
CCDC88CQ9P219 AC068787.1-201ENST00000623908 691 ntBASIC0.85□□□□□ -2.27
CCDC88CQ9P219 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.85□□□□□ -2.27
CCDC88CQ9P219 Y_RNA.36-201ENST00000362602 112 ntBASIC0.84□□□□□ -2.27
CCDC88CQ9P219 SNORA72.2-201ENST00000365028 127 ntBASIC0.84□□□□□ -2.27
CCDC88CQ9P219 RNU6-641P-201ENST00000384006 107 ntBASIC0.84□□□□□ -2.27
CCDC88CQ9P219 MIR513B-201ENST00000385136 84 ntBASIC0.84□□□□□ -2.27
CCDC88CQ9P219 AL031779.1-201ENST00000415663 330 ntBASIC0.84□□□□□ -2.27
CCDC88CQ9P219 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.84□□□□□ -2.27
CCDC88CQ9P219 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC0.84□□□□□ -2.27
CCDC88CQ9P219 AL035666.1-201ENST00000446195 348 ntBASIC0.84□□□□□ -2.27
CCDC88CQ9P219 AL583843.1-201ENST00000456070 346 ntBASIC0.84□□□□□ -2.27
CCDC88CQ9P219 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.84□□□□□ -2.27
CCDC88CQ9P219 AC010587.1-201ENST00000505809 469 ntBASIC0.84□□□□□ -2.27
CCDC88CQ9P219 AC005741.1-201ENST00000511094 432 ntBASIC0.84□□□□□ -2.27
CCDC88CQ9P219 RNU6-759P-201ENST00000516740 103 ntBASIC0.84□□□□□ -2.27
CCDC88CQ9P219 BCRP9-201ENST00000605312 388 ntBASIC0.84□□□□□ -2.27
CCDC88CQ9P219 MIR8065-201ENST00000620577 100 ntBASIC0.84□□□□□ -2.27
CCDC88CQ9P219 AC138649.3-201ENST00000622154 254 ntBASIC0.84□□□□□ -2.27
CCDC88CQ9P219 AC011155.2-201ENST00000623202 216 ntBASIC0.84□□□□□ -2.27
CCDC88CQ9P219 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.84□□□□□ -2.27
CCDC88CQ9P219 AC068700.1-201ENST00000565862 3754 ntBASIC0.84□□□□□ -2.28
CCDC88CQ9P219 Y_RNA.332-201ENST00000365271 113 ntBASIC0.84□□□□□ -2.28
CCDC88CQ9P219 RPL23AP32-201ENST00000395315 459 ntBASIC0.84□□□□□ -2.28
CCDC88CQ9P219 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.84□□□□□ -2.28
CCDC88CQ9P219 RPL21P90-201ENST00000415692 466 ntBASIC0.84□□□□□ -2.28
CCDC88CQ9P219 RPS27P16-201ENST00000425758 201 ntBASIC0.84□□□□□ -2.28
CCDC88CQ9P219 TOMM22P2-201ENST00000430735 237 ntBASIC0.84□□□□□ -2.28
CCDC88CQ9P219 AL365184.2-201ENST00000431139 435 ntBASIC0.84□□□□□ -2.28
CCDC88CQ9P219 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.84□□□□□ -2.28
CCDC88CQ9P219 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.84□□□□□ -2.28
CCDC88CQ9P219 AC007395.1-201ENST00000451333 677 ntBASIC0.84□□□□□ -2.28
CCDC88CQ9P219 ZNF736P8Y-201ENST00000451913 669 ntBASIC0.84□□□□□ -2.28
CCDC88CQ9P219 AL139824.2-201ENST00000458731 1095 ntBASIC0.84□□□□□ -2.28
CCDC88CQ9P219 HMGN1P13-201ENST00000505795 138 ntBASIC0.84□□□□□ -2.28
CCDC88CQ9P219 AC103851.1-201ENST00000506833 274 ntBASIC0.84□□□□□ -2.28
CCDC88CQ9P219 AC104806.1-201ENST00000508720 308 ntBASIC0.84□□□□□ -2.28
CCDC88CQ9P219 MTATP6P9-201ENST00000515039 680 ntBASIC0.84□□□□□ -2.28
CCDC88CQ9P219 AP003072.2-201ENST00000527756 676 ntBASIC0.84□□□□□ -2.28
CCDC88CQ9P219 BNIP3P16-201ENST00000589779 534 ntBASIC0.84□□□□□ -2.28
CCDC88CQ9P219 MTND4P9-201ENST00000507819 1346 ntBASIC0.84□□□□□ -2.28
CCDC88CQ9P219 MTND4P4-201ENST00000439033 1366 ntBASIC0.83□□□□□ -2.28
CCDC88CQ9P219 SNORD56.2-201ENST00000363242 71 ntBASIC0.83□□□□□ -2.28
CCDC88CQ9P219 RNU6-931P-201ENST00000363850 107 ntBASIC0.83□□□□□ -2.28
CCDC88CQ9P219 SNORD114-2-201ENST00000363953 78 ntBASIC0.83□□□□□ -2.28
CCDC88CQ9P219 RNU6-501P-201ENST00000364072 100 ntBASIC0.83□□□□□ -2.28
CCDC88CQ9P219 RNU6-157P-201ENST00000383957 107 ntBASIC0.83□□□□□ -2.28
CCDC88CQ9P219 RNU6-142P-201ENST00000384019 107 ntBASIC0.83□□□□□ -2.28
CCDC88CQ9P219 RNU5A-2P-201ENST00000384337 116 ntBASIC0.83□□□□□ -2.28
CCDC88CQ9P219 RNU6-342P-201ENST00000384521 104 ntBASIC0.83□□□□□ -2.28
CCDC88CQ9P219 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.83□□□□□ -2.28
CCDC88CQ9P219 MTND1P26-201ENST00000440488 538 ntBASIC0.83□□□□□ -2.28
CCDC88CQ9P219 AC074344.1-201ENST00000512823 224 ntBASIC0.83□□□□□ -2.28
CCDC88CQ9P219 RNU6-410P-201ENST00000517006 107 ntBASIC0.83□□□□□ -2.28
CCDC88CQ9P219 MTND4LP18-201ENST00000526864 291 ntBASIC0.83□□□□□ -2.28
CCDC88CQ9P219 AC009094.1-201ENST00000564443 426 ntBASIC0.83□□□□□ -2.28
CCDC88CQ9P219 MIR3136-201ENST00000583498 78 ntBASIC0.83□□□□□ -2.28
CCDC88CQ9P219 AL031281.1-201ENST00000604049 488 ntBASIC0.83□□□□□ -2.28
CCDC88CQ9P219 AP000654.2-201ENST00000605633 586 ntBASIC0.83□□□□□ -2.28
CCDC88CQ9P219 MIR7844-201ENST00000616161 122 ntBASIC0.83□□□□□ -2.28
CCDC88CQ9P219 AC104010.1-201ENST00000616889 150 ntBASIC0.83□□□□□ -2.28
CCDC88CQ9P219 AC026585.1-201ENST00000619582 524 ntBASIC0.83□□□□□ -2.28
CCDC88CQ9P219 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
CCDC88CQ9P219 MIR424-201ENST00000362227 98 ntBASIC0.82□□□□□ -2.28
CCDC88CQ9P219 RNU6-338P-201ENST00000383888 105 ntBASIC0.82□□□□□ -2.28
CCDC88CQ9P219 RNU6-1029P-201ENST00000384109 107 ntBASIC0.82□□□□□ -2.28
CCDC88CQ9P219 GPR143P-201ENST00000434155 205 ntBASIC0.82□□□□□ -2.28
CCDC88CQ9P219 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.82□□□□□ -2.28
CCDC88CQ9P219 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.82□□□□□ -2.28
CCDC88CQ9P219 AL360271.2-201ENST00000447710 161 ntBASIC0.82□□□□□ -2.28
CCDC88CQ9P219 RPS27P1-201ENST00000450552 247 ntBASIC0.82□□□□□ -2.28
CCDC88CQ9P219 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.82□□□□□ -2.28
CCDC88CQ9P219 AC022616.6-201ENST00000520479 119 ntBASIC0.82□□□□□ -2.28
CCDC88CQ9P219 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.82□□□□□ -2.28
CCDC88CQ9P219 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.82□□□□□ -2.28
CCDC88CQ9P219 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.82□□□□□ -2.28
CCDC88CQ9P219 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC0.82□□□□□ -2.28
CCDC88CQ9P219 MIR3937-201ENST00000580135 106 ntBASIC0.82□□□□□ -2.28
CCDC88CQ9P219 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
CCDC88CQ9P219 MIR6835-201ENST00000621552 64 ntBASIC0.82□□□□□ -2.28
CCDC88CQ9P219 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.82□□□□□ -2.28
CCDC88CQ9P219 AC024940.5-201ENST00000622889 474 ntBASIC0.82□□□□□ -2.28
CCDC88CQ9P219 AC007671.2-201ENST00000637344 619 ntBASIC0.82□□□□□ -2.28
CCDC88CQ9P219 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.82□□□□□ -2.28
CCDC88CQ9P219 RNU6-37P-201ENST00000362692 107 ntBASIC0.82□□□□□ -2.28
CCDC88CQ9P219 SNORD114-26-201ENST00000363543 72 ntBASIC0.82□□□□□ -2.28
CCDC88CQ9P219 RNU6-11P-201ENST00000364234 107 ntBASIC0.82□□□□□ -2.28
CCDC88CQ9P219 RNY1P12-201ENST00000364251 105 ntBASIC0.82□□□□□ -2.28
CCDC88CQ9P219 RNU6-25P-201ENST00000383873 107 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 175.5 ms