Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.17□□□□□ -1.9
MKS1Q9NXB0 AC096644.2-201ENST00000429278 159 ntBASIC3.17□□□□□ -1.9
MKS1Q9NXB0 AC244505.4-201ENST00000434905 287 ntBASIC3.17□□□□□ -1.9
MKS1Q9NXB0 SSXP5-201ENST00000443473 287 ntBASIC3.17□□□□□ -1.9
MKS1Q9NXB0 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.17□□□□□ -1.9
MKS1Q9NXB0 RNU7-169P-201ENST00000459456 61 ntBASIC3.17□□□□□ -1.9
MKS1Q9NXB0 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.17□□□□□ -1.9
MKS1Q9NXB0 AC140059.1-201ENST00000489238 361 ntBASIC3.17□□□□□ -1.9
MKS1Q9NXB0 RNU6-475P-201ENST00000516073 104 ntBASIC3.17□□□□□ -1.9
MKS1Q9NXB0 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.17□□□□□ -1.9
MKS1Q9NXB0 GNAI2P1-201ENST00000541815 315 ntBASIC3.17□□□□□ -1.9
MKS1Q9NXB0 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.17□□□□□ -1.9
MKS1Q9NXB0 MIR2682-201ENST00000580305 110 ntBASIC3.17□□□□□ -1.9
MKS1Q9NXB0 MIR3199-1-201ENST00000582434 88 ntBASIC3.17□□□□□ -1.9
MKS1Q9NXB0 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.17□□□□□ -1.9
MKS1Q9NXB0 SNORD58B-201ENST00000607313 66 ntBASIC3.17□□□□□ -1.9
MKS1Q9NXB0 uc_338.25-201ENST00000613756 156 ntBASIC3.17□□□□□ -1.9
MKS1Q9NXB0 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.17□□□□□ -1.9
MKS1Q9NXB0 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
MKS1Q9NXB0 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.17□□□□□ -1.9
MKS1Q9NXB0 AC026241.1-201ENST00000517873 2142 ntBASIC3.17□□□□□ -1.9
MKS1Q9NXB0 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.17□□□□□ -1.9
MKS1Q9NXB0 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
MKS1Q9NXB0 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.16□□□□□ -1.9
MKS1Q9NXB0 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.16□□□□□ -1.9
MKS1Q9NXB0 snoU2_19.1-201ENST00000362361 80 ntBASIC3.16□□□□□ -1.9
MKS1Q9NXB0 RNU1-72P-201ENST00000362976 153 ntBASIC3.16□□□□□ -1.9
MKS1Q9NXB0 SNORA51.4-201ENST00000364993 124 ntBASIC3.16□□□□□ -1.9
MKS1Q9NXB0 RNU6-639P-201ENST00000384074 107 ntBASIC3.16□□□□□ -1.9
MKS1Q9NXB0 SNORA5A-201ENST00000384111 134 ntBASIC3.16□□□□□ -1.9
MKS1Q9NXB0 MIR208B-201ENST00000401172 77 ntBASIC3.16□□□□□ -1.9
MKS1Q9NXB0 Y_RNA.592-201ENST00000410274 109 ntBASIC3.16□□□□□ -1.9
MKS1Q9NXB0 RNA5SP201-201ENST00000410316 124 ntBASIC3.16□□□□□ -1.9
MKS1Q9NXB0 RPL19P1-201ENST00000411635 428 ntBASIC3.16□□□□□ -1.9
MKS1Q9NXB0 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.16□□□□□ -1.9
MKS1Q9NXB0 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.16□□□□□ -1.9
MKS1Q9NXB0 RPS15AP7-201ENST00000439294 405 ntBASIC3.16□□□□□ -1.9
MKS1Q9NXB0 RNU7-87P-201ENST00000459343 62 ntBASIC3.16□□□□□ -1.9
MKS1Q9NXB0 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.16□□□□□ -1.9
MKS1Q9NXB0 RN7SL499P-201ENST00000481141 276 ntBASIC3.16□□□□□ -1.9
MKS1Q9NXB0 AC106707.2-201ENST00000484182 374 ntBASIC3.16□□□□□ -1.9
MKS1Q9NXB0 ANXA2P1-201ENST00000505539 926 ntBASIC3.16□□□□□ -1.9
MKS1Q9NXB0 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.16□□□□□ -1.9
MKS1Q9NXB0 RNU1-95P-201ENST00000516357 160 ntBASIC3.16□□□□□ -1.9
MKS1Q9NXB0 RNU1-128P-201ENST00000516704 160 ntBASIC3.16□□□□□ -1.9
MKS1Q9NXB0 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.16□□□□□ -1.9
MKS1Q9NXB0 COX6CP5-201ENST00000527162 228 ntBASIC3.16□□□□□ -1.9
MKS1Q9NXB0 AC007458.1-201ENST00000542812 373 ntBASIC3.16□□□□□ -1.9
MKS1Q9NXB0 AC027288.2-201ENST00000553028 243 ntBASIC3.16□□□□□ -1.9
MKS1Q9NXB0 AC006130.2-201ENST00000586202 326 ntBASIC3.16□□□□□ -1.9
MKS1Q9NXB0 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.16□□□□□ -1.9
MKS1Q9NXB0 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
MKS1Q9NXB0 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
MKS1Q9NXB0 AC005592.1-201ENST00000566527 1640 ntBASIC3.15□□□□□ -1.9
MKS1Q9NXB0 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.15□□□□□ -1.9
MKS1Q9NXB0 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
MKS1Q9NXB0 Y_RNA.80-201ENST00000362996 102 ntBASIC3.15□□□□□ -1.91
MKS1Q9NXB0 Y_RNA.162-201ENST00000363683 102 ntBASIC3.15□□□□□ -1.91
MKS1Q9NXB0 Y_RNA.319-201ENST00000365138 92 ntBASIC3.15□□□□□ -1.91
MKS1Q9NXB0 Y_RNA.358-201ENST00000365491 99 ntBASIC3.15□□□□□ -1.91
MKS1Q9NXB0 Y_RNA.485-201ENST00000384395 102 ntBASIC3.15□□□□□ -1.91
MKS1Q9NXB0 MIR606-201ENST00000384851 96 ntBASIC3.15□□□□□ -1.91
MKS1Q9NXB0 MIR487A-201ENST00000385009 80 ntBASIC3.15□□□□□ -1.91
MKS1Q9NXB0 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.15□□□□□ -1.91
MKS1Q9NXB0 AL513477.1-202ENST00000417061 214 ntBASIC3.15□□□□□ -1.91
MKS1Q9NXB0 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.15□□□□□ -1.91
MKS1Q9NXB0 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.15□□□□□ -1.91
MKS1Q9NXB0 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.15□□□□□ -1.91
MKS1Q9NXB0 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.15□□□□□ -1.91
MKS1Q9NXB0 AC105245.1-201ENST00000581934 244 ntBASIC3.15□□□□□ -1.91
MKS1Q9NXB0 MIR4276-201ENST00000584832 70 ntBASIC3.15□□□□□ -1.91
MKS1Q9NXB0 VN1R91P-201ENST00000594377 169 ntBASIC3.15□□□□□ -1.91
MKS1Q9NXB0 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.15□□□□□ -1.91
MKS1Q9NXB0 AL670379.2-201ENST00000604983 252 ntBASIC3.15□□□□□ -1.91
MKS1Q9NXB0 AL138963.2-201ENST00000605137 226 ntBASIC3.15□□□□□ -1.91
MKS1Q9NXB0 AC069294.1-201ENST00000608397 350 ntBASIC3.15□□□□□ -1.91
MKS1Q9NXB0 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.15□□□□□ -1.91
MKS1Q9NXB0 AL138825.1-201ENST00000618587 192 ntBASIC3.15□□□□□ -1.91
MKS1Q9NXB0 U2.1-201ENST00000618978 145 ntBASIC3.15□□□□□ -1.91
MKS1Q9NXB0 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.15□□□□□ -1.91
MKS1Q9NXB0 AC243829.7-201ENST00000633081 225 ntBASIC3.15□□□□□ -1.91
MKS1Q9NXB0 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.15□□□□□ -1.91
MKS1Q9NXB0 AL049781.1-201ENST00000623195 3585 ntBASIC3.15□□□□□ -1.91
MKS1Q9NXB0 MTND5P16-201ENST00000460269 1703 ntBASIC3.15□□□□□ -1.91
MKS1Q9NXB0 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
MKS1Q9NXB0 AC069528.2-201ENST00000624849 1991 ntBASIC3.14□□□□□ -1.91
MKS1Q9NXB0 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
MKS1Q9NXB0 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
MKS1Q9NXB0 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.14□□□□□ -1.91
MKS1Q9NXB0 Y_RNA.158-201ENST00000363651 101 ntBASIC3.14□□□□□ -1.91
MKS1Q9NXB0 SNORD115-8-201ENST00000363856 82 ntBASIC3.14□□□□□ -1.91
MKS1Q9NXB0 SNORD115-38-201ENST00000365037 82 ntBASIC3.14□□□□□ -1.91
MKS1Q9NXB0 RNU6-378P-201ENST00000384324 107 ntBASIC3.14□□□□□ -1.91
MKS1Q9NXB0 RNU6-1160P-201ENST00000384546 104 ntBASIC3.14□□□□□ -1.91
MKS1Q9NXB0 RNU6-541P-201ENST00000384709 110 ntBASIC3.14□□□□□ -1.91
MKS1Q9NXB0 RNU6-1093P-201ENST00000391194 107 ntBASIC3.14□□□□□ -1.91
MKS1Q9NXB0 HMGN2P35-201ENST00000412164 270 ntBASIC3.14□□□□□ -1.91
MKS1Q9NXB0 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.14□□□□□ -1.91
MKS1Q9NXB0 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.14□□□□□ -1.91
MKS1Q9NXB0 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms