Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
CHCHD3Q9NX63 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
CHCHD3Q9NX63 AL360182.1-201ENST00000397433 468 ntBASIC2.13□□□□□ -2.07
CHCHD3Q9NX63 AL590002.1-201ENST00000406554 418 ntBASIC2.13□□□□□ -2.07
CHCHD3Q9NX63 RNA5SP201-201ENST00000410316 124 ntBASIC2.13□□□□□ -2.07
CHCHD3Q9NX63 AC016907.1-201ENST00000419483 435 ntBASIC2.13□□□□□ -2.07
CHCHD3Q9NX63 SNRPGP7-201ENST00000469016 106 ntBASIC2.13□□□□□ -2.07
CHCHD3Q9NX63 RN7SKP24-201ENST00000515888 284 ntBASIC2.13□□□□□ -2.07
CHCHD3Q9NX63 RNU6-720P-201ENST00000516363 108 ntBASIC2.13□□□□□ -2.07
CHCHD3Q9NX63 RNA5SP24-201ENST00000516478 95 ntBASIC2.13□□□□□ -2.07
CHCHD3Q9NX63 RNU1-40P-201ENST00000516816 164 ntBASIC2.13□□□□□ -2.07
CHCHD3Q9NX63 RNU1-97P-201ENST00000516872 164 ntBASIC2.13□□□□□ -2.07
CHCHD3Q9NX63 RNU6-612P-201ENST00000516909 102 ntBASIC2.13□□□□□ -2.07
CHCHD3Q9NX63 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CHCHD3Q9NX63 AC079600.2-201ENST00000550076 130 ntBASIC2.13□□□□□ -2.07
CHCHD3Q9NX63 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.13□□□□□ -2.07
CHCHD3Q9NX63 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.13□□□□□ -2.07
CHCHD3Q9NX63 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.13□□□□□ -2.07
CHCHD3Q9NX63 MIR3162-201ENST00000581818 82 ntBASIC2.13□□□□□ -2.07
CHCHD3Q9NX63 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.13□□□□□ -2.07
CHCHD3Q9NX63 AC064807.4-201ENST00000607201 407 ntBASIC2.13□□□□□ -2.07
CHCHD3Q9NX63 AC093783.1-201ENST00000612976 329 ntBASIC2.13□□□□□ -2.07
CHCHD3Q9NX63 AL359314.1-201ENST00000616913 261 ntBASIC2.13□□□□□ -2.07
CHCHD3Q9NX63 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.13□□□□□ -2.07
CHCHD3Q9NX63 Y_RNA.100-201ENST00000363141 102 ntBASIC2.12□□□□□ -2.07
CHCHD3Q9NX63 RNU6-522P-201ENST00000364497 107 ntBASIC2.12□□□□□ -2.07
CHCHD3Q9NX63 RNU6-483P-201ENST00000384088 108 ntBASIC2.12□□□□□ -2.07
CHCHD3Q9NX63 RNU6-373P-201ENST00000411247 98 ntBASIC2.12□□□□□ -2.07
CHCHD3Q9NX63 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.12□□□□□ -2.07
CHCHD3Q9NX63 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.12□□□□□ -2.07
CHCHD3Q9NX63 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.12□□□□□ -2.07
CHCHD3Q9NX63 MTCO1P20-201ENST00000425366 358 ntBASIC2.12□□□□□ -2.07
CHCHD3Q9NX63 NDUFA5P4-201ENST00000436704 385 ntBASIC2.12□□□□□ -2.07
CHCHD3Q9NX63 MTND1P34-201ENST00000438556 671 ntBASIC2.12□□□□□ -2.07
CHCHD3Q9NX63 AL353689.1-201ENST00000438895 199 ntBASIC2.12□□□□□ -2.07
CHCHD3Q9NX63 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CHCHD3Q9NX63 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.12□□□□□ -2.07
CHCHD3Q9NX63 AC104564.1-201ENST00000493028 407 ntBASIC2.12□□□□□ -2.07
CHCHD3Q9NX63 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.12□□□□□ -2.07
CHCHD3Q9NX63 RNU6-314P-201ENST00000516574 104 ntBASIC2.12□□□□□ -2.07
CHCHD3Q9NX63 MTND1P5-201ENST00000517906 940 ntBASIC2.12□□□□□ -2.07
CHCHD3Q9NX63 AP000889.1-201ENST00000530968 660 ntBASIC2.12□□□□□ -2.07
CHCHD3Q9NX63 AC025423.5-201ENST00000550230 219 ntBASIC2.12□□□□□ -2.07
CHCHD3Q9NX63 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.12□□□□□ -2.07
CHCHD3Q9NX63 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.12□□□□□ -2.07
CHCHD3Q9NX63 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.12□□□□□ -2.07
CHCHD3Q9NX63 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
CHCHD3Q9NX63 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.11□□□□□ -2.07
CHCHD3Q9NX63 Y_RNA.167-201ENST00000363735 109 ntBASIC2.11□□□□□ -2.07
CHCHD3Q9NX63 U3.9-201ENST00000363823 204 ntBASIC2.11□□□□□ -2.07
CHCHD3Q9NX63 Y_RNA.402-201ENST00000383972 102 ntBASIC2.11□□□□□ -2.07
CHCHD3Q9NX63 RNU6-26P-201ENST00000383985 107 ntBASIC2.11□□□□□ -2.07
CHCHD3Q9NX63 Y_RNA.510-201ENST00000384511 114 ntBASIC2.11□□□□□ -2.07
CHCHD3Q9NX63 SNORD73A-201ENST00000386062 65 ntBASIC2.11□□□□□ -2.07
CHCHD3Q9NX63 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CHCHD3Q9NX63 AL033519.2-201ENST00000403958 392 ntBASIC2.11□□□□□ -2.07
CHCHD3Q9NX63 RNU6-1068P-201ENST00000410958 103 ntBASIC2.11□□□□□ -2.07
CHCHD3Q9NX63 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.11□□□□□ -2.07
CHCHD3Q9NX63 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.11□□□□□ -2.07
CHCHD3Q9NX63 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.11□□□□□ -2.07
CHCHD3Q9NX63 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.11□□□□□ -2.07
CHCHD3Q9NX63 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.11□□□□□ -2.07
CHCHD3Q9NX63 RNA5SP356-201ENST00000515972 94 ntBASIC2.11□□□□□ -2.07
CHCHD3Q9NX63 RNU6-1038P-201ENST00000516516 104 ntBASIC2.11□□□□□ -2.07
CHCHD3Q9NX63 SNORA31.16-201ENST00000516773 139 ntBASIC2.11□□□□□ -2.07
CHCHD3Q9NX63 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.11□□□□□ -2.07
CHCHD3Q9NX63 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.11□□□□□ -2.07
CHCHD3Q9NX63 BNIP3P25-201ENST00000596023 559 ntBASIC2.11□□□□□ -2.07
CHCHD3Q9NX63 AC006023.1-201ENST00000603944 259 ntBASIC2.11□□□□□ -2.07
CHCHD3Q9NX63 Z98751.3-201ENST00000604447 521 ntBASIC2.11□□□□□ -2.07
CHCHD3Q9NX63 AC063943.3-201ENST00000615562 356 ntBASIC2.11□□□□□ -2.07
CHCHD3Q9NX63 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.11□□□□□ -2.07
CHCHD3Q9NX63 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
CHCHD3Q9NX63 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CHCHD3Q9NX63 AC009541.1-201ENST00000438279 2662 ntBASIC2.1□□□□□ -2.07
CHCHD3Q9NX63 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.1□□□□□ -2.07
CHCHD3Q9NX63 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
CHCHD3Q9NX63 SNORD113-7-201ENST00000363762 77 ntBASIC2.1□□□□□ -2.07
CHCHD3Q9NX63 RNU4-75P-201ENST00000364621 146 ntBASIC2.1□□□□□ -2.07
CHCHD3Q9NX63 Y_RNA.500-201ENST00000384466 111 ntBASIC2.1□□□□□ -2.07
CHCHD3Q9NX63 Y_RNA.504-201ENST00000384481 104 ntBASIC2.1□□□□□ -2.07
CHCHD3Q9NX63 Y_RNA.530-201ENST00000384587 101 ntBASIC2.1□□□□□ -2.07
CHCHD3Q9NX63 SNORD116-4-201ENST00000384733 96 ntBASIC2.1□□□□□ -2.07
CHCHD3Q9NX63 Y_RNA.573-201ENST00000384763 105 ntBASIC2.1□□□□□ -2.07
CHCHD3Q9NX63 AL356432.1-201ENST00000405809 419 ntBASIC2.1□□□□□ -2.07
CHCHD3Q9NX63 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CHCHD3Q9NX63 DLGAP5P1-201ENST00000430307 464 ntBASIC2.1□□□□□ -2.07
CHCHD3Q9NX63 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.1□□□□□ -2.07
CHCHD3Q9NX63 MTCO1P29-201ENST00000496868 288 ntBASIC2.1□□□□□ -2.07
CHCHD3Q9NX63 AC005741.1-201ENST00000511094 432 ntBASIC2.1□□□□□ -2.07
CHCHD3Q9NX63 AC025465.4-201ENST00000513422 638 ntBASIC2.1□□□□□ -2.07
CHCHD3Q9NX63 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.1□□□□□ -2.07
CHCHD3Q9NX63 AL121757.2-201ENST00000611223 313 ntBASIC2.1□□□□□ -2.07
CHCHD3Q9NX63 MIR1291-201ENST00000627649 87 ntBASIC2.1□□□□□ -2.07
CHCHD3Q9NX63 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CHCHD3Q9NX63 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.1□□□□□ -2.07
CHCHD3Q9NX63 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CHCHD3Q9NX63 RNU6-451P-201ENST00000362921 107 ntBASIC2.09□□□□□ -2.07
CHCHD3Q9NX63 RNU6-234P-201ENST00000365229 104 ntBASIC2.09□□□□□ -2.07
CHCHD3Q9NX63 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms