Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3□□□□□ -1.93
RLIMQ9NVW2 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3□□□□□ -1.93
RLIMQ9NVW2 WARS2P1-201ENST00000429678 537 ntBASIC3□□□□□ -1.93
RLIMQ9NVW2 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3□□□□□ -1.93
RLIMQ9NVW2 RPS29P12-201ENST00000460178 152 ntBASIC3□□□□□ -1.93
RLIMQ9NVW2 AC146507.2-201ENST00000460608 476 ntBASIC3□□□□□ -1.93
RLIMQ9NVW2 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3□□□□□ -1.93
RLIMQ9NVW2 HMGB1P35-201ENST00000503360 598 ntBASIC3□□□□□ -1.93
RLIMQ9NVW2 AC093852.1-201ENST00000503587 266 ntBASIC3□□□□□ -1.93
RLIMQ9NVW2 PHBP14-201ENST00000512887 367 ntBASIC3□□□□□ -1.93
RLIMQ9NVW2 RNU6-567P-201ENST00000516746 107 ntBASIC3□□□□□ -1.93
RLIMQ9NVW2 COX6CP5-201ENST00000527162 228 ntBASIC3□□□□□ -1.93
RLIMQ9NVW2 MIR3136-201ENST00000583498 78 ntBASIC3□□□□□ -1.93
RLIMQ9NVW2 7SK.10-201ENST00000621414 298 ntBASIC3□□□□□ -1.93
RLIMQ9NVW2 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3□□□□□ -1.93
RLIMQ9NVW2 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
RLIMQ9NVW2 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
RLIMQ9NVW2 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.99□□□□□ -1.93
RLIMQ9NVW2 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
RLIMQ9NVW2 Y_RNA.512-201ENST00000384518 102 ntBASIC2.99□□□□□ -1.93
RLIMQ9NVW2 RNU6-1093P-201ENST00000391194 107 ntBASIC2.99□□□□□ -1.93
RLIMQ9NVW2 U3.26-201ENST00000391236 204 ntBASIC2.99□□□□□ -1.93
RLIMQ9NVW2 AC097463.2-201ENST00000421074 142 ntBASIC2.99□□□□□ -1.93
RLIMQ9NVW2 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
RLIMQ9NVW2 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.99□□□□□ -1.93
RLIMQ9NVW2 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.99□□□□□ -1.93
RLIMQ9NVW2 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.99□□□□□ -1.93
RLIMQ9NVW2 RN7SL75P-201ENST00000461926 281 ntBASIC2.99□□□□□ -1.93
RLIMQ9NVW2 AC008155.2-201ENST00000464337 397 ntBASIC2.99□□□□□ -1.93
RLIMQ9NVW2 RNU2-53P-201ENST00000516257 147 ntBASIC2.99□□□□□ -1.93
RLIMQ9NVW2 AP002404.1-201ENST00000532005 451 ntBASIC2.99□□□□□ -1.93
RLIMQ9NVW2 AC027288.2-201ENST00000553028 243 ntBASIC2.99□□□□□ -1.93
RLIMQ9NVW2 AL442163.3-201ENST00000554110 156 ntBASIC2.99□□□□□ -1.93
RLIMQ9NVW2 AC090517.1-201ENST00000569307 266 ntBASIC2.99□□□□□ -1.93
RLIMQ9NVW2 RAC1P9-201ENST00000604990 392 ntBASIC2.99□□□□□ -1.93
RLIMQ9NVW2 AL138963.2-201ENST00000605137 226 ntBASIC2.99□□□□□ -1.93
RLIMQ9NVW2 SNORA51-201ENST00000606420 132 ntBASIC2.99□□□□□ -1.93
RLIMQ9NVW2 AC107294.3-201ENST00000609211 526 ntBASIC2.99□□□□□ -1.93
RLIMQ9NVW2 AC099778.2-201ENST00000610904 211 ntBASIC2.99□□□□□ -1.93
RLIMQ9NVW2 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.99□□□□□ -1.93
RLIMQ9NVW2 AC093831.2-201ENST00000624393 3427 ntBASIC2.99□□□□□ -1.93
RLIMQ9NVW2 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.99□□□□□ -1.93
RLIMQ9NVW2 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
RLIMQ9NVW2 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
RLIMQ9NVW2 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
RLIMQ9NVW2 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
RLIMQ9NVW2 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.98□□□□□ -1.93
RLIMQ9NVW2 snoU2_19.1-201ENST00000362361 80 ntBASIC2.98□□□□□ -1.93
RLIMQ9NVW2 Y_RNA.27-201ENST00000362540 103 ntBASIC2.98□□□□□ -1.93
RLIMQ9NVW2 RNU1-76P-201ENST00000362903 159 ntBASIC2.98□□□□□ -1.93
RLIMQ9NVW2 RNU6-1083P-201ENST00000384022 107 ntBASIC2.98□□□□□ -1.93
RLIMQ9NVW2 RNU6-926P-201ENST00000384075 107 ntBASIC2.98□□□□□ -1.93
RLIMQ9NVW2 MIR200C-201ENST00000384980 68 ntBASIC2.98□□□□□ -1.93
RLIMQ9NVW2 MIR568-201ENST00000385036 95 ntBASIC2.98□□□□□ -1.93
RLIMQ9NVW2 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
RLIMQ9NVW2 SNORA48.7-201ENST00000391302 135 ntBASIC2.98□□□□□ -1.93
RLIMQ9NVW2 RPL32P35-201ENST00000415214 394 ntBASIC2.98□□□□□ -1.93
RLIMQ9NVW2 CYCSP48-201ENST00000417124 323 ntBASIC2.98□□□□□ -1.93
RLIMQ9NVW2 MTCYBP9-201ENST00000431021 303 ntBASIC2.98□□□□□ -1.93
RLIMQ9NVW2 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.98□□□□□ -1.93
RLIMQ9NVW2 RPL21P10-201ENST00000463521 490 ntBASIC2.98□□□□□ -1.93
RLIMQ9NVW2 RPL27AP5-201ENST00000469428 449 ntBASIC2.98□□□□□ -1.93
RLIMQ9NVW2 AL121594.1-201ENST00000475906 575 ntBASIC2.98□□□□□ -1.93
RLIMQ9NVW2 RPL31P41-201ENST00000477967 372 ntBASIC2.98□□□□□ -1.93
RLIMQ9NVW2 RN7SL293P-201ENST00000481765 281 ntBASIC2.98□□□□□ -1.93
RLIMQ9NVW2 RNU6-1114P-201ENST00000516022 107 ntBASIC2.98□□□□□ -1.93
RLIMQ9NVW2 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.98□□□□□ -1.93
RLIMQ9NVW2 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.98□□□□□ -1.93
RLIMQ9NVW2 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.98□□□□□ -1.93
RLIMQ9NVW2 AC079598.5-201ENST00000547460 117 ntBASIC2.98□□□□□ -1.93
RLIMQ9NVW2 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.98□□□□□ -1.93
RLIMQ9NVW2 CYP4A27P-201ENST00000567218 190 ntBASIC2.98□□□□□ -1.93
RLIMQ9NVW2 MIR3923-201ENST00000579521 83 ntBASIC2.98□□□□□ -1.93
RLIMQ9NVW2 AL670379.2-201ENST00000604983 252 ntBASIC2.98□□□□□ -1.93
RLIMQ9NVW2 AL021879.1-201ENST00000611756 288 ntBASIC2.98□□□□□ -1.93
RLIMQ9NVW2 AC005296.1-201ENST00000616145 209 ntBASIC2.98□□□□□ -1.93
RLIMQ9NVW2 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.98□□□□□ -1.93
RLIMQ9NVW2 U6.92-201ENST00000636464 89 ntBASIC2.98□□□□□ -1.93
RLIMQ9NVW2 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.98□□□□□ -1.93
RLIMQ9NVW2 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.98□□□□□ -1.93
RLIMQ9NVW2 AC091564.4-201ENST00000533934 2194 ntBASIC2.98□□□□□ -1.93
RLIMQ9NVW2 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.98□□□□□ -1.93
RLIMQ9NVW2 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
RLIMQ9NVW2 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
RLIMQ9NVW2 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
RLIMQ9NVW2 RNA5SP361-201ENST00000362686 118 ntBASIC2.97□□□□□ -1.93
RLIMQ9NVW2 RNU6-1210P-201ENST00000363775 107 ntBASIC2.97□□□□□ -1.93
RLIMQ9NVW2 RNU6-463P-201ENST00000384340 107 ntBASIC2.97□□□□□ -1.93
RLIMQ9NVW2 Y_RNA.574-201ENST00000384766 95 ntBASIC2.97□□□□□ -1.93
RLIMQ9NVW2 MIR1302-3-201ENST00000408128 138 ntBASIC2.97□□□□□ -1.93
RLIMQ9NVW2 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.97□□□□□ -1.93
RLIMQ9NVW2 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.97□□□□□ -1.93
RLIMQ9NVW2 RPS15AP7-201ENST00000439294 405 ntBASIC2.97□□□□□ -1.93
RLIMQ9NVW2 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.97□□□□□ -1.93
RLIMQ9NVW2 AC140059.1-201ENST00000489238 361 ntBASIC2.97□□□□□ -1.93
RLIMQ9NVW2 AC010469.2-201ENST00000496412 480 ntBASIC2.97□□□□□ -1.93
RLIMQ9NVW2 MTCO2P24-201ENST00000515611 426 ntBASIC2.97□□□□□ -1.93
RLIMQ9NVW2 RNY3P15-201ENST00000516297 97 ntBASIC2.97□□□□□ -1.93
RLIMQ9NVW2 SNORA67.7-201ENST00000516664 135 ntBASIC2.97□□□□□ -1.93
RLIMQ9NVW2 SNORA40.15-201ENST00000516884 107 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 180.5 ms