Protein–RNA interactions for Protein: Q9NV64

TMEM39A, Transmembrane protein 39A, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39AQ9NV64 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.05□□□□□ -1.76
TMEM39AQ9NV64 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
TMEM39AQ9NV64 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
TMEM39AQ9NV64 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.04□□□□□ -1.76
TMEM39AQ9NV64 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC4.04□□□□□ -1.76
TMEM39AQ9NV64 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.04□□□□□ -1.76
TMEM39AQ9NV64 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TMEM39AQ9NV64 AC008725.1-201ENST00000605123 2263 ntBASIC4.04□□□□□ -1.76
TMEM39AQ9NV64 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
TMEM39AQ9NV64 AC073073.2-201ENST00000609827 2578 ntBASIC4.04□□□□□ -1.76
TMEM39AQ9NV64 UBE2WP1-201ENST00000362030 340 ntBASIC4.04□□□□□ -1.76
TMEM39AQ9NV64 RNU5F-3P-201ENST00000363767 117 ntBASIC4.04□□□□□ -1.76
TMEM39AQ9NV64 Y_RNA.383-201ENST00000383855 97 ntBASIC4.04□□□□□ -1.76
TMEM39AQ9NV64 RNA5SP424-201ENST00000390988 115 ntBASIC4.04□□□□□ -1.76
TMEM39AQ9NV64 SNORA48.5-201ENST00000391143 135 ntBASIC4.04□□□□□ -1.76
TMEM39AQ9NV64 RPS26P42-201ENST00000413485 326 ntBASIC4.04□□□□□ -1.76
TMEM39AQ9NV64 AC017083.1-201ENST00000428093 483 ntBASIC4.04□□□□□ -1.76
TMEM39AQ9NV64 MTCO1P5-201ENST00000433573 344 ntBASIC4.04□□□□□ -1.76
TMEM39AQ9NV64 AC112220.1-201ENST00000434628 355 ntBASIC4.04□□□□□ -1.76
TMEM39AQ9NV64 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC4.04□□□□□ -1.76
TMEM39AQ9NV64 HLA-N-201ENST00000437516 135 ntBASIC4.04□□□□□ -1.76
TMEM39AQ9NV64 RPS4XP13-201ENST00000483219 789 ntBASIC4.04□□□□□ -1.76
TMEM39AQ9NV64 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.04□□□□□ -1.76
TMEM39AQ9NV64 Y_RNA.683-201ENST00000516508 93 ntBASIC4.04□□□□□ -1.76
TMEM39AQ9NV64 SNORA27.4-201ENST00000516650 95 ntBASIC4.04□□□□□ -1.76
TMEM39AQ9NV64 AC022559.1-201ENST00000520905 205 ntBASIC4.04□□□□□ -1.76
TMEM39AQ9NV64 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.04□□□□□ -1.76
TMEM39AQ9NV64 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC4.04□□□□□ -1.76
TMEM39AQ9NV64 MIR3910-1-201ENST00000580936 111 ntBASIC4.04□□□□□ -1.76
TMEM39AQ9NV64 MIR3609-201ENST00000582661 80 ntBASIC4.04□□□□□ -1.76
TMEM39AQ9NV64 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.04□□□□□ -1.76
TMEM39AQ9NV64 AL078605.1-201ENST00000603529 500 ntBASIC4.04□□□□□ -1.76
TMEM39AQ9NV64 AL137849.1-201ENST00000604767 169 ntBASIC4.04□□□□□ -1.76
TMEM39AQ9NV64 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TMEM39AQ9NV64 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
TMEM39AQ9NV64 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
TMEM39AQ9NV64 AC093908.1-201ENST00000623125 8092 ntBASIC4.03□□□□□ -1.76
TMEM39AQ9NV64 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.03□□□□□ -1.76
TMEM39AQ9NV64 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
TMEM39AQ9NV64 ZNF204P-201ENST00000416749 2397 ntBASIC4.03□□□□□ -1.76
TMEM39AQ9NV64 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TMEM39AQ9NV64 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
TMEM39AQ9NV64 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TMEM39AQ9NV64 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TMEM39AQ9NV64 Y_RNA.82-201ENST00000363000 102 ntBASIC4.03□□□□□ -1.76
TMEM39AQ9NV64 Y_RNA.92-201ENST00000363043 102 ntBASIC4.03□□□□□ -1.76
TMEM39AQ9NV64 Y_RNA.235-201ENST00000364412 102 ntBASIC4.03□□□□□ -1.76
TMEM39AQ9NV64 Y_RNA.306-201ENST00000365015 102 ntBASIC4.03□□□□□ -1.76
TMEM39AQ9NV64 Y_RNA.312-201ENST00000365089 102 ntBASIC4.03□□□□□ -1.76
TMEM39AQ9NV64 Y_RNA.322-201ENST00000365151 102 ntBASIC4.03□□□□□ -1.76
TMEM39AQ9NV64 RNU6-487P-201ENST00000365430 104 ntBASIC4.03□□□□□ -1.76
TMEM39AQ9NV64 RNU6-1289P-201ENST00000384431 106 ntBASIC4.03□□□□□ -1.76
TMEM39AQ9NV64 SNORA46.1-201ENST00000391069 153 ntBASIC4.03□□□□□ -1.76
TMEM39AQ9NV64 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.03□□□□□ -1.76
TMEM39AQ9NV64 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.03□□□□□ -1.76
TMEM39AQ9NV64 Y_RNA.650-201ENST00000459002 102 ntBASIC4.03□□□□□ -1.76
TMEM39AQ9NV64 Y_RNA.638-201ENST00000459374 113 ntBASIC4.03□□□□□ -1.76
TMEM39AQ9NV64 AC109925.1-201ENST00000478069 331 ntBASIC4.03□□□□□ -1.76
TMEM39AQ9NV64 AC074198.2-201ENST00000508153 258 ntBASIC4.03□□□□□ -1.76
TMEM39AQ9NV64 RNU1-61P-201ENST00000516107 151 ntBASIC4.03□□□□□ -1.76
TMEM39AQ9NV64 SNORA31.16-201ENST00000516773 139 ntBASIC4.03□□□□□ -1.76
TMEM39AQ9NV64 Y_RNA.703-201ENST00000516846 111 ntBASIC4.03□□□□□ -1.76
TMEM39AQ9NV64 Y_RNA.777-201ENST00000516982 102 ntBASIC4.03□□□□□ -1.76
TMEM39AQ9NV64 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC4.03□□□□□ -1.76
TMEM39AQ9NV64 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TMEM39AQ9NV64 HMGN2P15-201ENST00000585707 270 ntBASIC4.03□□□□□ -1.76
TMEM39AQ9NV64 AC012493.2-201ENST00000595083 291 ntBASIC4.03□□□□□ -1.76
TMEM39AQ9NV64 Y_RNA.771-201ENST00000598668 102 ntBASIC4.03□□□□□ -1.76
TMEM39AQ9NV64 AC072026.1-201ENST00000605023 201 ntBASIC4.03□□□□□ -1.76
TMEM39AQ9NV64 AC011921.3-201ENST00000605540 361 ntBASIC4.03□□□□□ -1.76
TMEM39AQ9NV64 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC4.03□□□□□ -1.76
TMEM39AQ9NV64 Y_RNA.789-201ENST00000622480 102 ntBASIC4.03□□□□□ -1.76
TMEM39AQ9NV64 AL353746.1-201ENST00000566293 6881 ntBASIC4.03□□□□□ -1.76
TMEM39AQ9NV64 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
TMEM39AQ9NV64 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
TMEM39AQ9NV64 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.77
TMEM39AQ9NV64 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TMEM39AQ9NV64 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TMEM39AQ9NV64 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
TMEM39AQ9NV64 Y_RNA.136-201ENST00000363444 102 ntBASIC4.02□□□□□ -1.77
TMEM39AQ9NV64 RPL19P1-201ENST00000411635 428 ntBASIC4.02□□□□□ -1.77
TMEM39AQ9NV64 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.02□□□□□ -1.77
TMEM39AQ9NV64 HMGN2P16-201ENST00000456802 261 ntBASIC4.02□□□□□ -1.77
TMEM39AQ9NV64 AC090525.1-201ENST00000479116 478 ntBASIC4.02□□□□□ -1.77
TMEM39AQ9NV64 AC025518.1-201ENST00000479856 347 ntBASIC4.02□□□□□ -1.77
TMEM39AQ9NV64 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.02□□□□□ -1.77
TMEM39AQ9NV64 RPS26P15-201ENST00000488067 348 ntBASIC4.02□□□□□ -1.77
TMEM39AQ9NV64 SNORA70.18-201ENST00000516696 98 ntBASIC4.02□□□□□ -1.77
TMEM39AQ9NV64 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.02□□□□□ -1.77
TMEM39AQ9NV64 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.02□□□□□ -1.77
TMEM39AQ9NV64 AC233702.2-202ENST00000562547 291 ntBASIC4.02□□□□□ -1.77
TMEM39AQ9NV64 AL590240.4-201ENST00000616908 390 ntBASIC4.02□□□□□ -1.77
TMEM39AQ9NV64 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.02□□□□□ -1.77
TMEM39AQ9NV64 AC048347.1-201ENST00000624621 427 ntBASIC4.02□□□□□ -1.77
TMEM39AQ9NV64 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC4.02□□□□□ -1.77
TMEM39AQ9NV64 AP000553.6-201ENST00000641242 118 ntBASIC4.02□□□□□ -1.77
TMEM39AQ9NV64 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.02□□□□□ -1.77
TMEM39AQ9NV64 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.02□□□□□ -1.77
TMEM39AQ9NV64 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.02□□□□□ -1.77
TMEM39AQ9NV64 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms