Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC015911.1-201ENST00000495111 156 ntBASIC1.28□□□□□ -2.2
TREX1Q9NSU2 MTCO3P7-201ENST00000510008 774 ntBASIC1.28□□□□□ -2.2
TREX1Q9NSU2 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.28□□□□□ -2.2
TREX1Q9NSU2 RNU6-1129P-201ENST00000515964 104 ntBASIC1.28□□□□□ -2.2
TREX1Q9NSU2 RNU6-232P-201ENST00000517144 64 ntBASIC1.28□□□□□ -2.2
TREX1Q9NSU2 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.28□□□□□ -2.2
TREX1Q9NSU2 AC106038.2-201ENST00000520706 568 ntBASIC1.28□□□□□ -2.2
TREX1Q9NSU2 AC109446.1-201ENST00000566172 220 ntBASIC1.28□□□□□ -2.2
TREX1Q9NSU2 MIR4421-201ENST00000578133 69 ntBASIC1.28□□□□□ -2.2
TREX1Q9NSU2 AC110760.3-201ENST00000598794 467 ntBASIC1.28□□□□□ -2.2
TREX1Q9NSU2 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.28□□□□□ -2.2
TREX1Q9NSU2 Z99289.3-201ENST00000605586 594 ntBASIC1.28□□□□□ -2.2
TREX1Q9NSU2 LINC02555-201ENST00000563933 1951 ntBASIC1.27□□□□□ -2.21
TREX1Q9NSU2 RNU6-428P-201ENST00000362942 107 ntBASIC1.27□□□□□ -2.21
TREX1Q9NSU2 SNORD32B-201ENST00000364460 84 ntBASIC1.27□□□□□ -2.21
TREX1Q9NSU2 RNU6-692P-201ENST00000384496 107 ntBASIC1.27□□□□□ -2.21
TREX1Q9NSU2 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.27□□□□□ -2.21
TREX1Q9NSU2 SNORA40.3-201ENST00000390964 122 ntBASIC1.27□□□□□ -2.21
TREX1Q9NSU2 AL031577.2-201ENST00000404133 280 ntBASIC1.27□□□□□ -2.21
TREX1Q9NSU2 Y_RNA.595-201ENST00000410403 105 ntBASIC1.27□□□□□ -2.21
TREX1Q9NSU2 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.27□□□□□ -2.21
TREX1Q9NSU2 AC010975.2-201ENST00000427781 588 ntBASIC1.27□□□□□ -2.21
TREX1Q9NSU2 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.27□□□□□ -2.21
TREX1Q9NSU2 RPL31P35-201ENST00000431058 377 ntBASIC1.27□□□□□ -2.21
TREX1Q9NSU2 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.27□□□□□ -2.21
TREX1Q9NSU2 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
TREX1Q9NSU2 RPS29P15-201ENST00000458329 171 ntBASIC1.27□□□□□ -2.21
TREX1Q9NSU2 AC130509.1-201ENST00000464158 433 ntBASIC1.27□□□□□ -2.21
TREX1Q9NSU2 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC1.27□□□□□ -2.21
TREX1Q9NSU2 AC022447.4-201ENST00000504053 364 ntBASIC1.27□□□□□ -2.21
TREX1Q9NSU2 AC098862.1-201ENST00000504991 413 ntBASIC1.27□□□□□ -2.21
TREX1Q9NSU2 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.27□□□□□ -2.21
TREX1Q9NSU2 AC025465.3-201ENST00000510570 311 ntBASIC1.27□□□□□ -2.21
TREX1Q9NSU2 AC005741.1-201ENST00000511094 432 ntBASIC1.27□□□□□ -2.21
TREX1Q9NSU2 RNU6-415P-201ENST00000516252 97 ntBASIC1.27□□□□□ -2.21
TREX1Q9NSU2 RNU6-759P-201ENST00000516740 103 ntBASIC1.27□□□□□ -2.21
TREX1Q9NSU2 SNORA31.17-201ENST00000516953 127 ntBASIC1.27□□□□□ -2.21
TREX1Q9NSU2 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
TREX1Q9NSU2 COPS8P3-201ENST00000526024 482 ntBASIC1.27□□□□□ -2.21
TREX1Q9NSU2 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
TREX1Q9NSU2 AC008015.1-201ENST00000555505 465 ntBASIC1.27□□□□□ -2.21
TREX1Q9NSU2 AL512598.1-201ENST00000610158 273 ntBASIC1.27□□□□□ -2.21
TREX1Q9NSU2 SEPT14P19-203ENST00000633205 211 ntBASIC1.27□□□□□ -2.21
TREX1Q9NSU2 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.27□□□□□ -2.21
TREX1Q9NSU2 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.26□□□□□ -2.21
TREX1Q9NSU2 Y_RNA.4-201ENST00000362333 112 ntBASIC1.26□□□□□ -2.21
TREX1Q9NSU2 RNU4-56P-201ENST00000364700 142 ntBASIC1.26□□□□□ -2.21
TREX1Q9NSU2 RNU6-142P-201ENST00000384019 107 ntBASIC1.26□□□□□ -2.21
TREX1Q9NSU2 RNU6-43P-201ENST00000384302 107 ntBASIC1.26□□□□□ -2.21
TREX1Q9NSU2 MIR1-2-201ENST00000384961 85 ntBASIC1.26□□□□□ -2.21
TREX1Q9NSU2 MIR454-201ENST00000390180 115 ntBASIC1.26□□□□□ -2.21
TREX1Q9NSU2 AC015922.2-201ENST00000435593 184 ntBASIC1.26□□□□□ -2.21
TREX1Q9NSU2 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.26□□□□□ -2.21
TREX1Q9NSU2 AC244670.1-201ENST00000436879 112 ntBASIC1.26□□□□□ -2.21
TREX1Q9NSU2 AL121601.2-201ENST00000438019 707 ntBASIC1.26□□□□□ -2.21
TREX1Q9NSU2 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.26□□□□□ -2.21
TREX1Q9NSU2 RNU7-182P-201ENST00000459009 62 ntBASIC1.26□□□□□ -2.21
TREX1Q9NSU2 RN7SKP210-201ENST00000459176 261 ntBASIC1.26□□□□□ -2.21
TREX1Q9NSU2 RNU7-95P-201ENST00000459222 64 ntBASIC1.26□□□□□ -2.21
TREX1Q9NSU2 AC005908.1-201ENST00000468701 347 ntBASIC1.26□□□□□ -2.21
TREX1Q9NSU2 AC010409.1-201ENST00000487382 476 ntBASIC1.26□□□□□ -2.21
TREX1Q9NSU2 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.26□□□□□ -2.21
TREX1Q9NSU2 RNU1-92P-201ENST00000517017 135 ntBASIC1.26□□□□□ -2.21
TREX1Q9NSU2 RNA5SP503-201ENST00000517047 117 ntBASIC1.26□□□□□ -2.21
TREX1Q9NSU2 AC023050.3-201ENST00000541142 333 ntBASIC1.26□□□□□ -2.21
TREX1Q9NSU2 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.26□□□□□ -2.21
TREX1Q9NSU2 RRN3P3-201ENST00000549207 578 ntBASIC1.26□□□□□ -2.21
TREX1Q9NSU2 ZNF321P-202ENST00000550843 495 ntBASIC1.26□□□□□ -2.21
TREX1Q9NSU2 DNAJC19P9-201ENST00000555084 351 ntBASIC1.26□□□□□ -2.21
TREX1Q9NSU2 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.26□□□□□ -2.21
TREX1Q9NSU2 AC009094.1-201ENST00000564443 426 ntBASIC1.26□□□□□ -2.21
TREX1Q9NSU2 MIR4775-201ENST00000581168 75 ntBASIC1.26□□□□□ -2.21
TREX1Q9NSU2 MIR3136-201ENST00000583498 78 ntBASIC1.26□□□□□ -2.21
TREX1Q9NSU2 AC005786.1-201ENST00000588553 154 ntBASIC1.26□□□□□ -2.21
TREX1Q9NSU2 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC1.26□□□□□ -2.21
TREX1Q9NSU2 AC024933.1-201ENST00000608472 348 ntBASIC1.26□□□□□ -2.21
TREX1Q9NSU2 AC122133.1-201ENST00000613964 233 ntBASIC1.26□□□□□ -2.21
TREX1Q9NSU2 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
TREX1Q9NSU2 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
TREX1Q9NSU2 Y_RNA.238-201ENST00000364441 102 ntBASIC1.25□□□□□ -2.21
TREX1Q9NSU2 RNU6-1141P-201ENST00000364520 107 ntBASIC1.25□□□□□ -2.21
TREX1Q9NSU2 RNU6-336P-201ENST00000364891 107 ntBASIC1.25□□□□□ -2.21
TREX1Q9NSU2 RNU6-438P-201ENST00000365561 103 ntBASIC1.25□□□□□ -2.21
TREX1Q9NSU2 RNU6-1029P-201ENST00000384109 107 ntBASIC1.25□□□□□ -2.21
TREX1Q9NSU2 SNORD26-201ENST00000384147 75 ntBASIC1.25□□□□□ -2.21
TREX1Q9NSU2 RNU6-74P-201ENST00000384235 107 ntBASIC1.25□□□□□ -2.21
TREX1Q9NSU2 RNA5SP247-201ENST00000411181 105 ntBASIC1.25□□□□□ -2.21
TREX1Q9NSU2 MTCO3P41-201ENST00000414801 328 ntBASIC1.25□□□□□ -2.21
TREX1Q9NSU2 AL669831.1-202ENST00000428504 417 ntBASIC1.25□□□□□ -2.21
TREX1Q9NSU2 AL596276.1-201ENST00000434465 418 ntBASIC1.25□□□□□ -2.21
TREX1Q9NSU2 GTF2IP13-201ENST00000438487 386 ntBASIC1.25□□□□□ -2.21
TREX1Q9NSU2 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.25□□□□□ -2.21
TREX1Q9NSU2 SNRPEP8-201ENST00000442866 260 ntBASIC1.25□□□□□ -2.21
TREX1Q9NSU2 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.25□□□□□ -2.21
TREX1Q9NSU2 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
TREX1Q9NSU2 AL033528.1-201ENST00000453780 140 ntBASIC1.25□□□□□ -2.21
TREX1Q9NSU2 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.25□□□□□ -2.21
TREX1Q9NSU2 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.25□□□□□ -2.21
TREX1Q9NSU2 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.25□□□□□ -2.21
TREX1Q9NSU2 SNORA31.16-201ENST00000516773 139 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms