Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 DEFB131E-202ENST00000602581 683 ntBASIC0.54□□□□□ -2.32
KIAA1549Q9HCM3 AC090578.1-201ENST00000604955 591 ntBASIC0.54□□□□□ -2.32
KIAA1549Q9HCM3 AC018889.1-201ENST00000605372 397 ntBASIC0.54□□□□□ -2.32
KIAA1549Q9HCM3 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
KIAA1549Q9HCM3 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.54□□□□□ -2.32
KIAA1549Q9HCM3 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
KIAA1549Q9HCM3 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
KIAA1549Q9HCM3 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.53□□□□□ -2.32
KIAA1549Q9HCM3 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.53□□□□□ -2.32
KIAA1549Q9HCM3 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.53□□□□□ -2.32
KIAA1549Q9HCM3 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.53□□□□□ -2.32
KIAA1549Q9HCM3 HSPE1P9-201ENST00000440046 311 ntBASIC0.53□□□□□ -2.32
KIAA1549Q9HCM3 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.53□□□□□ -2.32
KIAA1549Q9HCM3 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.53□□□□□ -2.32
KIAA1549Q9HCM3 AC097473.1-201ENST00000508142 408 ntBASIC0.53□□□□□ -2.32
KIAA1549Q9HCM3 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.53□□□□□ -2.32
KIAA1549Q9HCM3 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.53□□□□□ -2.32
KIAA1549Q9HCM3 AC025678.1-201ENST00000567861 338 ntBASIC0.53□□□□□ -2.32
KIAA1549Q9HCM3 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.53□□□□□ -2.32
KIAA1549Q9HCM3 AC121334.2-201ENST00000605387 271 ntBASIC0.53□□□□□ -2.32
KIAA1549Q9HCM3 MIR3976-201ENST00000606807 139 ntBASIC0.53□□□□□ -2.32
KIAA1549Q9HCM3 RNU6-87P-201ENST00000607561 108 ntBASIC0.53□□□□□ -2.32
KIAA1549Q9HCM3 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.53□□□□□ -2.32
KIAA1549Q9HCM3 AC103706.2-201ENST00000638080 240 ntBASIC0.53□□□□□ -2.32
KIAA1549Q9HCM3 OR4G2P-201ENST00000328113 903 ntBASIC0.52□□□□□ -2.33
KIAA1549Q9HCM3 RNU6-527P-201ENST00000363425 104 ntBASIC0.52□□□□□ -2.33
KIAA1549Q9HCM3 SNORA4.1-201ENST00000364263 144 ntBASIC0.52□□□□□ -2.33
KIAA1549Q9HCM3 Y_RNA.393-201ENST00000383936 102 ntBASIC0.52□□□□□ -2.33
KIAA1549Q9HCM3 MIR10A-201ENST00000385043 110 ntBASIC0.52□□□□□ -2.33
KIAA1549Q9HCM3 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC0.52□□□□□ -2.33
KIAA1549Q9HCM3 AC069282.1-201ENST00000411911 526 ntBASIC0.52□□□□□ -2.33
KIAA1549Q9HCM3 MTCO1P21-201ENST00000416634 589 ntBASIC0.52□□□□□ -2.33
KIAA1549Q9HCM3 COX6CP10-201ENST00000416832 224 ntBASIC0.52□□□□□ -2.33
KIAA1549Q9HCM3 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.52□□□□□ -2.33
KIAA1549Q9HCM3 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.52□□□□□ -2.33
KIAA1549Q9HCM3 RPS26P45-201ENST00000471748 340 ntBASIC0.52□□□□□ -2.33
KIAA1549Q9HCM3 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.52□□□□□ -2.33
KIAA1549Q9HCM3 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.52□□□□□ -2.33
KIAA1549Q9HCM3 AC105313.1-201ENST00000509121 353 ntBASIC0.52□□□□□ -2.33
KIAA1549Q9HCM3 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.52□□□□□ -2.33
KIAA1549Q9HCM3 AC116353.3-201ENST00000511215 249 ntBASIC0.52□□□□□ -2.33
KIAA1549Q9HCM3 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC0.52□□□□□ -2.33
KIAA1549Q9HCM3 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.52□□□□□ -2.33
KIAA1549Q9HCM3 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.52□□□□□ -2.33
KIAA1549Q9HCM3 MIR3136-201ENST00000583498 78 ntBASIC0.52□□□□□ -2.33
KIAA1549Q9HCM3 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.52□□□□□ -2.33
KIAA1549Q9HCM3 AL592221.1-201ENST00000605266 382 ntBASIC0.52□□□□□ -2.33
KIAA1549Q9HCM3 AC024060.1-201ENST00000607052 494 ntBASIC0.52□□□□□ -2.33
KIAA1549Q9HCM3 AC009229.3-201ENST00000608056 282 ntBASIC0.52□□□□□ -2.33
KIAA1549Q9HCM3 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.52□□□□□ -2.33
KIAA1549Q9HCM3 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.52□□□□□ -2.33
KIAA1549Q9HCM3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
KIAA1549Q9HCM3 RNU6-142P-201ENST00000384019 107 ntBASIC0.52□□□□□ -2.33
KIAA1549Q9HCM3 RNU6-43P-201ENST00000384302 107 ntBASIC0.52□□□□□ -2.33
KIAA1549Q9HCM3 MIR100-201ENST00000385259 80 ntBASIC0.52□□□□□ -2.33
KIAA1549Q9HCM3 RNU2-3P-201ENST00000410144 191 ntBASIC0.52□□□□□ -2.33
KIAA1549Q9HCM3 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.52□□□□□ -2.33
KIAA1549Q9HCM3 AC137499.1-201ENST00000427602 88 ntBASIC0.52□□□□□ -2.33
KIAA1549Q9HCM3 C8orf59P1-201ENST00000429930 303 ntBASIC0.52□□□□□ -2.33
KIAA1549Q9HCM3 AL591043.1-201ENST00000432461 424 ntBASIC0.52□□□□□ -2.33
KIAA1549Q9HCM3 AL358794.1-201ENST00000445689 381 ntBASIC0.52□□□□□ -2.33
KIAA1549Q9HCM3 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.52□□□□□ -2.33
KIAA1549Q9HCM3 AL133373.1-201ENST00000497098 94 ntBASIC0.52□□□□□ -2.33
KIAA1549Q9HCM3 AC010587.2-201ENST00000511727 448 ntBASIC0.52□□□□□ -2.33
KIAA1549Q9HCM3 SNORA3.4-201ENST00000515969 96 ntBASIC0.52□□□□□ -2.33
KIAA1549Q9HCM3 RNU7-51P-201ENST00000516560 62 ntBASIC0.52□□□□□ -2.33
KIAA1549Q9HCM3 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.52□□□□□ -2.33
KIAA1549Q9HCM3 AL442163.3-201ENST00000554110 156 ntBASIC0.52□□□□□ -2.33
KIAA1549Q9HCM3 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.51□□□□□ -2.33
KIAA1549Q9HCM3 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.51□□□□□ -2.33
KIAA1549Q9HCM3 AL159152.1-201ENST00000635019 2587 ntBASIC0.51□□□□□ -2.33
KIAA1549Q9HCM3 RNU2-72P-201ENST00000411175 163 ntBASIC0.51□□□□□ -2.33
KIAA1549Q9HCM3 PIGPP2-201ENST00000411569 458 ntBASIC0.51□□□□□ -2.33
KIAA1549Q9HCM3 MTND4P20-201ENST00000424125 869 ntBASIC0.51□□□□□ -2.33
KIAA1549Q9HCM3 SNX2P2-201ENST00000424553 323 ntBASIC0.51□□□□□ -2.33
KIAA1549Q9HCM3 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.51□□□□□ -2.33
KIAA1549Q9HCM3 MTND1P30-201ENST00000441241 901 ntBASIC0.51□□□□□ -2.33
KIAA1549Q9HCM3 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.51□□□□□ -2.33
KIAA1549Q9HCM3 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.51□□□□□ -2.33
KIAA1549Q9HCM3 AC091135.1-201ENST00000585943 307 ntBASIC0.51□□□□□ -2.33
KIAA1549Q9HCM3 AC004492.1-201ENST00000607036 742 ntBASIC0.51□□□□□ -2.33
KIAA1549Q9HCM3 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
KIAA1549Q9HCM3 RNY4P24-201ENST00000362735 96 ntBASIC0.5□□□□□ -2.33
KIAA1549Q9HCM3 RNA5SP257-201ENST00000363023 116 ntBASIC0.5□□□□□ -2.33
KIAA1549Q9HCM3 RNU6-1285P-201ENST00000363480 105 ntBASIC0.5□□□□□ -2.33
KIAA1549Q9HCM3 MIR200A-201ENST00000384875 90 ntBASIC0.5□□□□□ -2.33
KIAA1549Q9HCM3 MIR1284-201ENST00000408337 120 ntBASIC0.5□□□□□ -2.33
KIAA1549Q9HCM3 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.5□□□□□ -2.33
KIAA1549Q9HCM3 ARL5AP1-201ENST00000418991 388 ntBASIC0.5□□□□□ -2.33
KIAA1549Q9HCM3 RPS3AP37-201ENST00000419176 745 ntBASIC0.5□□□□□ -2.33
KIAA1549Q9HCM3 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.5□□□□□ -2.33
KIAA1549Q9HCM3 AC006026.2-201ENST00000457376 180 ntBASIC0.5□□□□□ -2.33
KIAA1549Q9HCM3 RNU5F-4P-201ENST00000516581 114 ntBASIC0.5□□□□□ -2.33
KIAA1549Q9HCM3 SNORA43.2-201ENST00000516652 128 ntBASIC0.5□□□□□ -2.33
KIAA1549Q9HCM3 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.5□□□□□ -2.33
KIAA1549Q9HCM3 AC092451.2-201ENST00000538746 658 ntBASIC0.5□□□□□ -2.33
KIAA1549Q9HCM3 MIR5692A1-201ENST00000580523 69 ntBASIC0.5□□□□□ -2.33
KIAA1549Q9HCM3 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.5□□□□□ -2.33
KIAA1549Q9HCM3 AC012409.4-201ENST00000612923 249 ntBASIC0.5□□□□□ -2.33
KIAA1549Q9HCM3 AL121895.2-201ENST00000619558 447 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms