Protein–RNA interactions for Protein: Q9H9J4

USP42, Ubiquitin carboxyl-terminal hydrolase 42, humanhuman

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP42Q9H9J4 AC097372.5-201ENST00000623665 376 ntBASIC1.13□□□□□ -2.23
USP42Q9H9J4 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.13□□□□□ -2.23
USP42Q9H9J4 MTND4P9-201ENST00000507819 1346 ntBASIC1.12□□□□□ -2.23
USP42Q9H9J4 AL391994.1-201ENST00000254724 282 ntBASIC1.12□□□□□ -2.23
USP42Q9H9J4 RNU4-1-201ENST00000363925 141 ntBASIC1.12□□□□□ -2.23
USP42Q9H9J4 RNU6-384P-201ENST00000364900 104 ntBASIC1.12□□□□□ -2.23
USP42Q9H9J4 AC114491.1-201ENST00000416095 246 ntBASIC1.12□□□□□ -2.23
USP42Q9H9J4 EBAG9P1-201ENST00000418955 543 ntBASIC1.12□□□□□ -2.23
USP42Q9H9J4 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC1.12□□□□□ -2.23
USP42Q9H9J4 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.12□□□□□ -2.23
USP42Q9H9J4 RNU6-333P-201ENST00000459117 107 ntBASIC1.12□□□□□ -2.23
USP42Q9H9J4 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.12□□□□□ -2.23
USP42Q9H9J4 AC090115.3-201ENST00000553218 849 ntBASIC1.12□□□□□ -2.23
USP42Q9H9J4 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.12□□□□□ -2.23
USP42Q9H9J4 AC005668.1-201ENST00000571142 476 ntBASIC1.12□□□□□ -2.23
USP42Q9H9J4 AL136363.2-201ENST00000604173 851 ntBASIC1.12□□□□□ -2.23
USP42Q9H9J4 AC112191.3-201ENST00000604371 277 ntBASIC1.12□□□□□ -2.23
USP42Q9H9J4 FAM71BP1-201ENST00000604431 523 ntBASIC1.12□□□□□ -2.23
USP42Q9H9J4 AP002360.4-201ENST00000606980 481 ntBASIC1.12□□□□□ -2.23
USP42Q9H9J4 AL078604.3-201ENST00000615580 211 ntBASIC1.12□□□□□ -2.23
USP42Q9H9J4 AC073343.1-201ENST00000328239 651 ntBASIC1.11□□□□□ -2.23
USP42Q9H9J4 RNU6-37P-201ENST00000362692 107 ntBASIC1.11□□□□□ -2.23
USP42Q9H9J4 RNU6-11P-201ENST00000364234 107 ntBASIC1.11□□□□□ -2.23
USP42Q9H9J4 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.11□□□□□ -2.23
USP42Q9H9J4 RNU6-1200P-201ENST00000384162 107 ntBASIC1.11□□□□□ -2.23
USP42Q9H9J4 MIR620-201ENST00000385232 95 ntBASIC1.11□□□□□ -2.23
USP42Q9H9J4 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.11□□□□□ -2.23
USP42Q9H9J4 AC004941.2-201ENST00000427009 228 ntBASIC1.11□□□□□ -2.23
USP42Q9H9J4 AL596276.1-201ENST00000434465 418 ntBASIC1.11□□□□□ -2.23
USP42Q9H9J4 HSPE1P9-201ENST00000440046 311 ntBASIC1.11□□□□□ -2.23
USP42Q9H9J4 JTBP1-201ENST00000441314 247 ntBASIC1.11□□□□□ -2.23
USP42Q9H9J4 SNRPEP8-201ENST00000442866 260 ntBASIC1.11□□□□□ -2.23
USP42Q9H9J4 AC079448.1-201ENST00000449377 373 ntBASIC1.11□□□□□ -2.23
USP42Q9H9J4 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.11□□□□□ -2.23
USP42Q9H9J4 RNU7-40P-201ENST00000516397 64 ntBASIC1.11□□□□□ -2.23
USP42Q9H9J4 RNA5SP337-201ENST00000517007 109 ntBASIC1.11□□□□□ -2.23
USP42Q9H9J4 DEFB108E-201ENST00000524692 240 ntBASIC1.11□□□□□ -2.23
USP42Q9H9J4 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC1.11□□□□□ -2.23
USP42Q9H9J4 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC1.11□□□□□ -2.23
USP42Q9H9J4 AC104010.1-201ENST00000616889 150 ntBASIC1.11□□□□□ -2.23
USP42Q9H9J4 AL031667.3-201ENST00000620124 655 ntBASIC1.11□□□□□ -2.23
USP42Q9H9J4 AC068205.3-201ENST00000636385 468 ntBASIC1.11□□□□□ -2.23
USP42Q9H9J4 AC006927.4-201ENST00000639187 543 ntBASIC1.11□□□□□ -2.23
USP42Q9H9J4 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.1□□□□□ -2.23
USP42Q9H9J4 SNORD56.2-201ENST00000363242 71 ntBASIC1.1□□□□□ -2.23
USP42Q9H9J4 RNU5E-7P-201ENST00000365290 117 ntBASIC1.1□□□□□ -2.23
USP42Q9H9J4 RNU6-438P-201ENST00000365561 103 ntBASIC1.1□□□□□ -2.23
USP42Q9H9J4 RNU6-39P-201ENST00000384344 107 ntBASIC1.1□□□□□ -2.23
USP42Q9H9J4 RPL23AP32-201ENST00000395315 459 ntBASIC1.1□□□□□ -2.23
USP42Q9H9J4 RAP1BP3-201ENST00000407180 549 ntBASIC1.1□□□□□ -2.23
USP42Q9H9J4 RPS27P16-201ENST00000425758 201 ntBASIC1.1□□□□□ -2.23
USP42Q9H9J4 CALM2P2-201ENST00000428512 440 ntBASIC1.1□□□□□ -2.23
USP42Q9H9J4 TOMM22P2-201ENST00000430735 237 ntBASIC1.1□□□□□ -2.23
USP42Q9H9J4 AC004854.1-201ENST00000440356 349 ntBASIC1.1□□□□□ -2.23
USP42Q9H9J4 RPS27AP8-201ENST00000452665 445 ntBASIC1.1□□□□□ -2.23
USP42Q9H9J4 ART2BP-201ENST00000453501 499 ntBASIC1.1□□□□□ -2.23
USP42Q9H9J4 MTND1P12-201ENST00000455231 147 ntBASIC1.1□□□□□ -2.23
USP42Q9H9J4 RPL9P9-202ENST00000466501 579 ntBASIC1.1□□□□□ -2.23
USP42Q9H9J4 MTCO3P9-201ENST00000506989 781 ntBASIC1.1□□□□□ -2.23
USP42Q9H9J4 AC005741.1-201ENST00000511094 432 ntBASIC1.1□□□□□ -2.23
USP42Q9H9J4 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC1.1□□□□□ -2.23
USP42Q9H9J4 AC018714.1-201ENST00000605028 208 ntBASIC1.1□□□□□ -2.23
USP42Q9H9J4 AC012409.4-201ENST00000612923 249 ntBASIC1.1□□□□□ -2.23
USP42Q9H9J4 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.1□□□□□ -2.23
USP42Q9H9J4 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.09□□□□□ -2.23
USP42Q9H9J4 MTCO3P41-201ENST00000414801 328 ntBASIC1.09□□□□□ -2.24
USP42Q9H9J4 AC139712.2-201ENST00000424302 339 ntBASIC1.09□□□□□ -2.24
USP42Q9H9J4 AC007283.2-201ENST00000424739 197 ntBASIC1.09□□□□□ -2.24
USP42Q9H9J4 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.09□□□□□ -2.24
USP42Q9H9J4 RPL37P21-201ENST00000435890 276 ntBASIC1.09□□□□□ -2.24
USP42Q9H9J4 UBE2V1P8-201ENST00000437166 265 ntBASIC1.09□□□□□ -2.24
USP42Q9H9J4 RPL26P26-201ENST00000480251 434 ntBASIC1.09□□□□□ -2.24
USP42Q9H9J4 AC145146.1-201ENST00000496370 254 ntBASIC1.09□□□□□ -2.24
USP42Q9H9J4 SUMO2P18-201ENST00000518873 252 ntBASIC1.09□□□□□ -2.24
USP42Q9H9J4 AP003181.2-201ENST00000528941 181 ntBASIC1.09□□□□□ -2.24
USP42Q9H9J4 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.09□□□□□ -2.24
USP42Q9H9J4 MTND4P33-201ENST00000556706 766 ntBASIC1.09□□□□□ -2.24
USP42Q9H9J4 MIR4999-201ENST00000585029 91 ntBASIC1.09□□□□□ -2.24
USP42Q9H9J4 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.09□□□□□ -2.24
USP42Q9H9J4 AC105148.1-201ENST00000604961 409 ntBASIC1.09□□□□□ -2.24
USP42Q9H9J4 AC022513.1-201ENST00000624512 117 ntBASIC1.09□□□□□ -2.24
USP42Q9H9J4 RNU6-78P-201ENST00000362897 107 ntBASIC1.08□□□□□ -2.24
USP42Q9H9J4 RNU6-26P-201ENST00000383985 107 ntBASIC1.08□□□□□ -2.24
USP42Q9H9J4 RNU6-17P-201ENST00000384245 107 ntBASIC1.08□□□□□ -2.24
USP42Q9H9J4 RNU6-18P-201ENST00000384527 107 ntBASIC1.08□□□□□ -2.24
USP42Q9H9J4 RNU6-296P-201ENST00000384608 107 ntBASIC1.08□□□□□ -2.24
USP42Q9H9J4 MRPL35P1-201ENST00000404272 572 ntBASIC1.08□□□□□ -2.24
USP42Q9H9J4 RNU6-1245P-201ENST00000411130 106 ntBASIC1.08□□□□□ -2.24
USP42Q9H9J4 MTCO2P8-201ENST00000412213 658 ntBASIC1.08□□□□□ -2.24
USP42Q9H9J4 AL008987.1-201ENST00000415528 237 ntBASIC1.08□□□□□ -2.24
USP42Q9H9J4 RPS27AP14-201ENST00000422868 454 ntBASIC1.08□□□□□ -2.24
USP42Q9H9J4 AL606662.1-201ENST00000445763 553 ntBASIC1.08□□□□□ -2.24
USP42Q9H9J4 AL360271.2-201ENST00000447710 161 ntBASIC1.08□□□□□ -2.24
USP42Q9H9J4 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.08□□□□□ -2.24
USP42Q9H9J4 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.08□□□□□ -2.24
USP42Q9H9J4 MTND3P5-201ENST00000512798 333 ntBASIC1.08□□□□□ -2.24
USP42Q9H9J4 RNU1-86P-201ENST00000516108 154 ntBASIC1.08□□□□□ -2.24
USP42Q9H9J4 RNU1-107P-201ENST00000516617 154 ntBASIC1.08□□□□□ -2.24
USP42Q9H9J4 AP001893.2-201ENST00000526949 202 ntBASIC1.08□□□□□ -2.24
USP42Q9H9J4 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms