Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RNF39Q9H2S5 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.88□□□□□ -1.47
RNF39Q9H2S5 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RNF39Q9H2S5 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
RNF39Q9H2S5 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
RNF39Q9H2S5 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RNF39Q9H2S5 U8.4-201ENST00000363626 134 ntBASIC5.88□□□□□ -1.47
RNF39Q9H2S5 SNORA25.6-201ENST00000364121 118 ntBASIC5.88□□□□□ -1.47
RNF39Q9H2S5 U3.10-201ENST00000364459 214 ntBASIC5.88□□□□□ -1.47
RNF39Q9H2S5 RNU6-291P-201ENST00000384720 107 ntBASIC5.88□□□□□ -1.47
RNF39Q9H2S5 ZFRP1-201ENST00000457579 2970 ntBASIC5.88□□□□□ -1.47
RNF39Q9H2S5 RNU7-35P-201ENST00000517174 62 ntBASIC5.88□□□□□ -1.47
RNF39Q9H2S5 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC5.88□□□□□ -1.47
RNF39Q9H2S5 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.88□□□□□ -1.47
RNF39Q9H2S5 FAM27D1-201ENST00000612308 341 ntBASIC5.88□□□□□ -1.47
RNF39Q9H2S5 AC105081.1-201ENST00000617727 106 ntBASIC5.88□□□□□ -1.47
RNF39Q9H2S5 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RNF39Q9H2S5 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RNF39Q9H2S5 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
RNF39Q9H2S5 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RNF39Q9H2S5 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RNF39Q9H2S5 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
RNF39Q9H2S5 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RNF39Q9H2S5 AL591135.1-201ENST00000401578 5914 ntBASIC5.87□□□□□ -1.47
RNF39Q9H2S5 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
RNF39Q9H2S5 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RNF39Q9H2S5 SNORD115-3-201ENST00000363100 82 ntBASIC5.87□□□□□ -1.47
RNF39Q9H2S5 SNORD115-22-201ENST00000364456 82 ntBASIC5.87□□□□□ -1.47
RNF39Q9H2S5 Y_RNA.491-201ENST00000384417 107 ntBASIC5.87□□□□□ -1.47
RNF39Q9H2S5 SNORA67-201ENST00000384423 137 ntBASIC5.87□□□□□ -1.47
RNF39Q9H2S5 U3.30-201ENST00000391308 210 ntBASIC5.87□□□□□ -1.47
RNF39Q9H2S5 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.87□□□□□ -1.47
RNF39Q9H2S5 MIR3064-201ENST00000581130 66 ntBASIC5.87□□□□□ -1.47
RNF39Q9H2S5 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.87□□□□□ -1.47
RNF39Q9H2S5 AP001362.1-201ENST00000625165 124 ntBASIC5.87□□□□□ -1.47
RNF39Q9H2S5 AC090517.3-201ENST00000625170 141 ntBASIC5.87□□□□□ -1.47
RNF39Q9H2S5 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC5.87□□□□□ -1.47
RNF39Q9H2S5 AL034549.2-201ENST00000618285 3373 ntBASIC5.87□□□□□ -1.47
RNF39Q9H2S5 AL137141.1-201ENST00000624622 4836 ntBASIC5.87□□□□□ -1.47
RNF39Q9H2S5 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RNF39Q9H2S5 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
RNF39Q9H2S5 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.86□□□□□ -1.47
RNF39Q9H2S5 AL022323.4-201ENST00000623980 13120 ntBASIC5.86□□□□□ -1.47
RNF39Q9H2S5 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RNF39Q9H2S5 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RNF39Q9H2S5 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RNF39Q9H2S5 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
RNF39Q9H2S5 SNORA70.9-201ENST00000384370 135 ntBASIC5.86□□□□□ -1.47
RNF39Q9H2S5 RPL23AP27-201ENST00000415161 451 ntBASIC5.86□□□□□ -1.47
RNF39Q9H2S5 SNORD125-201ENST00000459538 96 ntBASIC5.86□□□□□ -1.47
RNF39Q9H2S5 PPIAP15-201ENST00000479662 484 ntBASIC5.86□□□□□ -1.47
RNF39Q9H2S5 AC023790.1-201ENST00000482174 347 ntBASIC5.86□□□□□ -1.47
RNF39Q9H2S5 AC093249.4-201ENST00000564755 259 ntBASIC5.86□□□□□ -1.47
RNF39Q9H2S5 RPSAP73-201ENST00000614820 330 ntBASIC5.86□□□□□ -1.47
RNF39Q9H2S5 AC006065.5-201ENST00000623427 349 ntBASIC5.86□□□□□ -1.47
RNF39Q9H2S5 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
RNF39Q9H2S5 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RNF39Q9H2S5 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RNF39Q9H2S5 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
RNF39Q9H2S5 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.85□□□□□ -1.47
RNF39Q9H2S5 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RNF39Q9H2S5 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
RNF39Q9H2S5 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.85□□□□□ -1.47
RNF39Q9H2S5 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
RNF39Q9H2S5 AC021146.4-201ENST00000309229 279 ntBASIC5.85□□□□□ -1.47
RNF39Q9H2S5 SNORD45.1-201ENST00000363181 77 ntBASIC5.85□□□□□ -1.47
RNF39Q9H2S5 RNU1-106P-201ENST00000384382 164 ntBASIC5.85□□□□□ -1.47
RNF39Q9H2S5 RNU6-342P-201ENST00000384521 104 ntBASIC5.85□□□□□ -1.47
RNF39Q9H2S5 MIR765-201ENST00000390226 114 ntBASIC5.85□□□□□ -1.47
RNF39Q9H2S5 MIR1267-201ENST00000408723 78 ntBASIC5.85□□□□□ -1.47
RNF39Q9H2S5 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
RNF39Q9H2S5 RNU7-53P-201ENST00000516705 60 ntBASIC5.85□□□□□ -1.47
RNF39Q9H2S5 HMGN2P15-201ENST00000585707 270 ntBASIC5.85□□□□□ -1.47
RNF39Q9H2S5 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RNF39Q9H2S5 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
RNF39Q9H2S5 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
RNF39Q9H2S5 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
RNF39Q9H2S5 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.85□□□□□ -1.47
RNF39Q9H2S5 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RNF39Q9H2S5 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC5.85□□□□□ -1.47
RNF39Q9H2S5 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RNF39Q9H2S5 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RNF39Q9H2S5 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RNF39Q9H2S5 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
RNF39Q9H2S5 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
RNF39Q9H2S5 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
RNF39Q9H2S5 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RNF39Q9H2S5 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RNF39Q9H2S5 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
RNF39Q9H2S5 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RNF39Q9H2S5 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
RNF39Q9H2S5 SNORD113.1-201ENST00000363280 73 ntBASIC5.84□□□□□ -1.47
RNF39Q9H2S5 AL645927.1-201ENST00000396783 406 ntBASIC5.84□□□□□ -1.47
RNF39Q9H2S5 PSMD10P3-201ENST00000437000 448 ntBASIC5.84□□□□□ -1.47
RNF39Q9H2S5 AC009220.1-201ENST00000451614 275 ntBASIC5.84□□□□□ -1.47
RNF39Q9H2S5 RN7SL826P-201ENST00000479724 288 ntBASIC5.84□□□□□ -1.47
RNF39Q9H2S5 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC5.84□□□□□ -1.47
RNF39Q9H2S5 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.84□□□□□ -1.47
RNF39Q9H2S5 AL109933.3-201ENST00000619095 188 ntBASIC5.84□□□□□ -1.47
RNF39Q9H2S5 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 192.3 ms