Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AL033519.2-201ENST00000403958 392 ntBASIC1.98□□□□□ -2.09
CCSER1Q9C0I3 RNA5SP450-201ENST00000411206 102 ntBASIC1.98□□□□□ -2.09
CCSER1Q9C0I3 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CCSER1Q9C0I3 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.98□□□□□ -2.09
CCSER1Q9C0I3 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.98□□□□□ -2.09
CCSER1Q9C0I3 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.98□□□□□ -2.09
CCSER1Q9C0I3 CBX3P6-201ENST00000430257 527 ntBASIC1.98□□□□□ -2.09
CCSER1Q9C0I3 RPL23AP6-201ENST00000446637 472 ntBASIC1.98□□□□□ -2.09
CCSER1Q9C0I3 SCARNA18-201ENST00000459004 134 ntBASIC1.98□□□□□ -2.09
CCSER1Q9C0I3 RNU7-180P-201ENST00000459240 63 ntBASIC1.98□□□□□ -2.09
CCSER1Q9C0I3 RNU6-261P-201ENST00000459506 102 ntBASIC1.98□□□□□ -2.09
CCSER1Q9C0I3 AC019235.1-201ENST00000503847 207 ntBASIC1.98□□□□□ -2.09
CCSER1Q9C0I3 MTCYBP40-201ENST00000509390 1135 ntBASIC1.98□□□□□ -2.09
CCSER1Q9C0I3 AC009646.1-201ENST00000510455 318 ntBASIC1.98□□□□□ -2.09
CCSER1Q9C0I3 RNU2-69P-201ENST00000516061 100 ntBASIC1.98□□□□□ -2.09
CCSER1Q9C0I3 RNU6-506P-201ENST00000516553 94 ntBASIC1.98□□□□□ -2.09
CCSER1Q9C0I3 Y_RNA.693-201ENST00000516641 110 ntBASIC1.98□□□□□ -2.09
CCSER1Q9C0I3 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.98□□□□□ -2.09
CCSER1Q9C0I3 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.98□□□□□ -2.09
CCSER1Q9C0I3 AC011494.1-201ENST00000596454 237 ntBASIC1.98□□□□□ -2.09
CCSER1Q9C0I3 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.98□□□□□ -2.09
CCSER1Q9C0I3 AC005296.1-201ENST00000616145 209 ntBASIC1.98□□□□□ -2.09
CCSER1Q9C0I3 AC022418.1-201ENST00000624118 445 ntBASIC1.98□□□□□ -2.09
CCSER1Q9C0I3 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CCSER1Q9C0I3 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
CCSER1Q9C0I3 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
CCSER1Q9C0I3 Y_RNA.399-201ENST00000383955 105 ntBASIC1.97□□□□□ -2.09
CCSER1Q9C0I3 RNU6-1222P-201ENST00000384615 107 ntBASIC1.97□□□□□ -2.09
CCSER1Q9C0I3 SRIP3-201ENST00000413200 219 ntBASIC1.97□□□□□ -2.09
CCSER1Q9C0I3 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CCSER1Q9C0I3 RPL39P29-201ENST00000447779 157 ntBASIC1.97□□□□□ -2.09
CCSER1Q9C0I3 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.97□□□□□ -2.09
CCSER1Q9C0I3 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.97□□□□□ -2.09
CCSER1Q9C0I3 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.97□□□□□ -2.09
CCSER1Q9C0I3 AC109479.2-201ENST00000517842 174 ntBASIC1.97□□□□□ -2.09
CCSER1Q9C0I3 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.97□□□□□ -2.09
CCSER1Q9C0I3 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.97□□□□□ -2.09
CCSER1Q9C0I3 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.97□□□□□ -2.09
CCSER1Q9C0I3 AC015712.3-201ENST00000559380 164 ntBASIC1.97□□□□□ -2.09
CCSER1Q9C0I3 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.97□□□□□ -2.09
CCSER1Q9C0I3 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.97□□□□□ -2.09
CCSER1Q9C0I3 AC092954.2-201ENST00000609103 430 ntBASIC1.97□□□□□ -2.09
CCSER1Q9C0I3 AL159153.1-201ENST00000619688 317 ntBASIC1.97□□□□□ -2.09
CCSER1Q9C0I3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.97□□□□□ -2.09
CCSER1Q9C0I3 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.97□□□□□ -2.09
CCSER1Q9C0I3 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
CCSER1Q9C0I3 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.96□□□□□ -2.1
CCSER1Q9C0I3 Y_RNA.3-201ENST00000362331 103 ntBASIC1.96□□□□□ -2.1
CCSER1Q9C0I3 SNORA69-201ENST00000383895 132 ntBASIC1.96□□□□□ -2.1
CCSER1Q9C0I3 Y_RNA.480-201ENST00000384364 102 ntBASIC1.96□□□□□ -2.1
CCSER1Q9C0I3 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
CCSER1Q9C0I3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
CCSER1Q9C0I3 SNORA40.18-201ENST00000391200 128 ntBASIC1.96□□□□□ -2.1
CCSER1Q9C0I3 AL356432.1-201ENST00000405809 419 ntBASIC1.96□□□□□ -2.1
CCSER1Q9C0I3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.96□□□□□ -2.1
CCSER1Q9C0I3 AL645568.3-201ENST00000433683 316 ntBASIC1.96□□□□□ -2.1
CCSER1Q9C0I3 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.96□□□□□ -2.1
CCSER1Q9C0I3 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.96□□□□□ -2.1
CCSER1Q9C0I3 PRPS1P1-201ENST00000445305 876 ntBASIC1.96□□□□□ -2.1
CCSER1Q9C0I3 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.96□□□□□ -2.1
CCSER1Q9C0I3 RPL23AP3-201ENST00000453844 468 ntBASIC1.96□□□□□ -2.1
CCSER1Q9C0I3 HMGN2P23-201ENST00000456759 269 ntBASIC1.96□□□□□ -2.1
CCSER1Q9C0I3 RPL30P12-201ENST00000474666 353 ntBASIC1.96□□□□□ -2.1
CCSER1Q9C0I3 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.96□□□□□ -2.1
CCSER1Q9C0I3 HMGB3P17-201ENST00000504195 649 ntBASIC1.96□□□□□ -2.1
CCSER1Q9C0I3 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.96□□□□□ -2.1
CCSER1Q9C0I3 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.96□□□□□ -2.1
CCSER1Q9C0I3 RNU6-835P-201ENST00000516974 104 ntBASIC1.96□□□□□ -2.1
CCSER1Q9C0I3 CYCSP27-201ENST00000527643 293 ntBASIC1.96□□□□□ -2.1
CCSER1Q9C0I3 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.96□□□□□ -2.1
CCSER1Q9C0I3 AL512360.1-201ENST00000555346 234 ntBASIC1.96□□□□□ -2.1
CCSER1Q9C0I3 HMGB1P33-201ENST00000563485 527 ntBASIC1.96□□□□□ -2.1
CCSER1Q9C0I3 MIR3618-201ENST00000580330 88 ntBASIC1.96□□□□□ -2.1
CCSER1Q9C0I3 MIR4524B-201ENST00000581569 115 ntBASIC1.96□□□□□ -2.1
CCSER1Q9C0I3 MIR4424-201ENST00000585257 86 ntBASIC1.96□□□□□ -2.1
CCSER1Q9C0I3 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.96□□□□□ -2.1
CCSER1Q9C0I3 uc_338.34-201ENST00000617467 174 ntBASIC1.96□□□□□ -2.1
CCSER1Q9C0I3 U1.36-201ENST00000620684 176 ntBASIC1.96□□□□□ -2.1
CCSER1Q9C0I3 Y_RNA.40-201ENST00000362645 93 ntBASIC1.95□□□□□ -2.1
CCSER1Q9C0I3 RNU6-1303P-201ENST00000364841 107 ntBASIC1.95□□□□□ -2.1
CCSER1Q9C0I3 Y_RNA.324-201ENST00000365165 102 ntBASIC1.95□□□□□ -2.1
CCSER1Q9C0I3 SNORD14D-201ENST00000384390 87 ntBASIC1.95□□□□□ -2.1
CCSER1Q9C0I3 AL606923.1-201ENST00000406616 190 ntBASIC1.95□□□□□ -2.1
CCSER1Q9C0I3 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.95□□□□□ -2.1
CCSER1Q9C0I3 CYCSP49-201ENST00000420810 319 ntBASIC1.95□□□□□ -2.1
CCSER1Q9C0I3 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.95□□□□□ -2.1
CCSER1Q9C0I3 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.95□□□□□ -2.1
CCSER1Q9C0I3 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.95□□□□□ -2.1
CCSER1Q9C0I3 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.95□□□□□ -2.1
CCSER1Q9C0I3 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.95□□□□□ -2.1
CCSER1Q9C0I3 MTND4P7-201ENST00000523876 130 ntBASIC1.95□□□□□ -2.1
CCSER1Q9C0I3 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.95□□□□□ -2.1
CCSER1Q9C0I3 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.95□□□□□ -2.1
CCSER1Q9C0I3 AC104581.2-201ENST00000572227 430 ntBASIC1.95□□□□□ -2.1
CCSER1Q9C0I3 AC024614.2-201ENST00000577584 372 ntBASIC1.95□□□□□ -2.1
CCSER1Q9C0I3 MIR5583-1-201ENST00000580941 59 ntBASIC1.95□□□□□ -2.1
CCSER1Q9C0I3 MIR3941-201ENST00000582572 103 ntBASIC1.95□□□□□ -2.1
CCSER1Q9C0I3 AF250324.2-201ENST00000608299 610 ntBASIC1.95□□□□□ -2.1
CCSER1Q9C0I3 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.95□□□□□ -2.1
CCSER1Q9C0I3 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms