Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC0.12□□□□□ -2.39
VPS25Q9BRG1 MTCO1P27-201ENST00000448269 226 ntBASIC0.12□□□□□ -2.39
VPS25Q9BRG1 PAXBP1P1-201ENST00000449315 447 ntBASIC0.12□□□□□ -2.39
VPS25Q9BRG1 SNRPGP7-201ENST00000469016 106 ntBASIC0.12□□□□□ -2.39
VPS25Q9BRG1 AC108740.1-201ENST00000498629 225 ntBASIC0.12□□□□□ -2.39
VPS25Q9BRG1 AC011406.1-201ENST00000512440 370 ntBASIC0.12□□□□□ -2.39
VPS25Q9BRG1 SNORA26.10-201ENST00000516427 141 ntBASIC0.12□□□□□ -2.39
VPS25Q9BRG1 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.12□□□□□ -2.39
VPS25Q9BRG1 HMGN1P30-201ENST00000589286 268 ntBASIC0.12□□□□□ -2.39
VPS25Q9BRG1 AL022154.1-201ENST00000604698 785 ntBASIC0.12□□□□□ -2.39
VPS25Q9BRG1 AC068787.1-201ENST00000623908 691 ntBASIC0.12□□□□□ -2.39
VPS25Q9BRG1 SNORD98-201ENST00000636377 67 ntBASIC0.12□□□□□ -2.39
VPS25Q9BRG1 MTND5P16-201ENST00000460269 1703 ntBASIC0.12□□□□□ -2.39
VPS25Q9BRG1 RNU6-1285P-201ENST00000363480 105 ntBASIC0.11□□□□□ -2.39
VPS25Q9BRG1 snoZ40.1-201ENST00000364540 72 ntBASIC0.11□□□□□ -2.39
VPS25Q9BRG1 RNU6-418P-201ENST00000384035 107 ntBASIC0.11□□□□□ -2.39
VPS25Q9BRG1 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.11□□□□□ -2.39
VPS25Q9BRG1 RNA5SP299-201ENST00000391203 116 ntBASIC0.11□□□□□ -2.39
VPS25Q9BRG1 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
VPS25Q9BRG1 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.11□□□□□ -2.39
VPS25Q9BRG1 AC092628.1-201ENST00000436250 252 ntBASIC0.11□□□□□ -2.39
VPS25Q9BRG1 AL117351.1-201ENST00000438864 766 ntBASIC0.11□□□□□ -2.39
VPS25Q9BRG1 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.11□□□□□ -2.39
VPS25Q9BRG1 MTND5P2-201ENST00000442927 1142 ntBASIC0.11□□□□□ -2.39
VPS25Q9BRG1 AC016925.1-201ENST00000458303 298 ntBASIC0.11□□□□□ -2.39
VPS25Q9BRG1 AC104982.1-201ENST00000478775 574 ntBASIC0.11□□□□□ -2.39
VPS25Q9BRG1 AP000797.1-201ENST00000478870 387 ntBASIC0.11□□□□□ -2.39
VPS25Q9BRG1 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.11□□□□□ -2.39
VPS25Q9BRG1 AC008015.1-201ENST00000555505 465 ntBASIC0.11□□□□□ -2.39
VPS25Q9BRG1 AL138889.2-201ENST00000603883 242 ntBASIC0.11□□□□□ -2.39
VPS25Q9BRG1 AC016727.1-205ENST00000605437 569 ntBASIC0.11□□□□□ -2.39
VPS25Q9BRG1 AC012557.2-201ENST00000605919 418 ntBASIC0.11□□□□□ -2.39
VPS25Q9BRG1 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.11□□□□□ -2.39
VPS25Q9BRG1 MIR338-201ENST00000636369 67 ntBASIC0.11□□□□□ -2.39
VPS25Q9BRG1 MIR6767-201ENST00000637302 66 ntBASIC0.11□□□□□ -2.39
VPS25Q9BRG1 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
VPS25Q9BRG1 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
VPS25Q9BRG1 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
VPS25Q9BRG1 RNU6-349P-201ENST00000362402 107 ntBASIC0.1□□□□□ -2.39
VPS25Q9BRG1 RNU6-78P-201ENST00000362897 107 ntBASIC0.1□□□□□ -2.39
VPS25Q9BRG1 RNA5SP99-201ENST00000364020 114 ntBASIC0.1□□□□□ -2.39
VPS25Q9BRG1 SNORD31B-201ENST00000364977 69 ntBASIC0.1□□□□□ -2.39
VPS25Q9BRG1 RNU6-946P-201ENST00000383878 107 ntBASIC0.1□□□□□ -2.39
VPS25Q9BRG1 SNORA36.2-201ENST00000384004 127 ntBASIC0.1□□□□□ -2.39
VPS25Q9BRG1 TIMM9P3-201ENST00000428659 274 ntBASIC0.1□□□□□ -2.39
VPS25Q9BRG1 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC0.1□□□□□ -2.39
VPS25Q9BRG1 MTCYBP42-201ENST00000444653 1130 ntBASIC0.1□□□□□ -2.39
VPS25Q9BRG1 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.1□□□□□ -2.39
VPS25Q9BRG1 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
VPS25Q9BRG1 AL049830.1-201ENST00000468034 425 ntBASIC0.1□□□□□ -2.39
VPS25Q9BRG1 AC022493.2-201ENST00000506122 481 ntBASIC0.1□□□□□ -2.39
VPS25Q9BRG1 SNORA31.10-201ENST00000516482 106 ntBASIC0.1□□□□□ -2.39
VPS25Q9BRG1 AC092354.1-201ENST00000606057 376 ntBASIC0.1□□□□□ -2.39
VPS25Q9BRG1 AL360219.1-201ENST00000610230 366 ntBASIC0.1□□□□□ -2.39
VPS25Q9BRG1 GHRLOS.1-201ENST00000610995 70 ntBASIC0.1□□□□□ -2.39
VPS25Q9BRG1 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.1□□□□□ -2.39
VPS25Q9BRG1 AC243829.6-201ENST00000612652 106 ntBASIC0.1□□□□□ -2.39
VPS25Q9BRG1 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.1□□□□□ -2.39
VPS25Q9BRG1 7SK.10-201ENST00000621414 298 ntBASIC0.1□□□□□ -2.39
VPS25Q9BRG1 AC243829.3-201ENST00000622177 108 ntBASIC0.1□□□□□ -2.39
VPS25Q9BRG1 AP002782.1-201ENST00000623107 614 ntBASIC0.1□□□□□ -2.39
VPS25Q9BRG1 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC0.09□□□□□ -2.4
VPS25Q9BRG1 RNU6-468P-201ENST00000384003 109 ntBASIC0.09□□□□□ -2.4
VPS25Q9BRG1 RNU6-1179P-201ENST00000384667 107 ntBASIC0.09□□□□□ -2.4
VPS25Q9BRG1 MIR578-201ENST00000384828 96 ntBASIC0.09□□□□□ -2.4
VPS25Q9BRG1 SNORD89-201ENST00000390981 114 ntBASIC0.09□□□□□ -2.4
VPS25Q9BRG1 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.09□□□□□ -2.4
VPS25Q9BRG1 UBE2D3P3-201ENST00000426992 425 ntBASIC0.09□□□□□ -2.4
VPS25Q9BRG1 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.09□□□□□ -2.4
VPS25Q9BRG1 FABP5P4-201ENST00000437203 171 ntBASIC0.09□□□□□ -2.4
VPS25Q9BRG1 AL606662.1-201ENST00000445763 553 ntBASIC0.09□□□□□ -2.4
VPS25Q9BRG1 NDUFB1P2-201ENST00000449477 176 ntBASIC0.09□□□□□ -2.4
VPS25Q9BRG1 RNU6-856P-201ENST00000516959 98 ntBASIC0.09□□□□□ -2.4
VPS25Q9BRG1 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC0.09□□□□□ -2.4
VPS25Q9BRG1 AL606834.3-201ENST00000602615 496 ntBASIC0.09□□□□□ -2.4
VPS25Q9BRG1 AP002802.2-201ENST00000605877 235 ntBASIC0.09□□□□□ -2.4
VPS25Q9BRG1 AC078880.5-201ENST00000617845 421 ntBASIC0.09□□□□□ -2.4
VPS25Q9BRG1 RMST_7.1-201ENST00000621935 268 ntBASIC0.09□□□□□ -2.4
VPS25Q9BRG1 RNU6-1327P-201ENST00000365302 105 ntBASIC0.08□□□□□ -2.4
VPS25Q9BRG1 SNORD116-13-201ENST00000384408 92 ntBASIC0.08□□□□□ -2.4
VPS25Q9BRG1 RNU6-950P-201ENST00000384651 107 ntBASIC0.08□□□□□ -2.4
VPS25Q9BRG1 RNU6-1031P-201ENST00000384773 107 ntBASIC0.08□□□□□ -2.4
VPS25Q9BRG1 MIR216A-201ENST00000385063 110 ntBASIC0.08□□□□□ -2.4
VPS25Q9BRG1 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.08□□□□□ -2.4
VPS25Q9BRG1 SNORA12.1-201ENST00000390873 148 ntBASIC0.08□□□□□ -2.4
VPS25Q9BRG1 MIR320C1-201ENST00000408566 88 ntBASIC0.08□□□□□ -2.4
VPS25Q9BRG1 RNA5SP222-201ENST00000411039 105 ntBASIC0.08□□□□□ -2.4
VPS25Q9BRG1 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.08□□□□□ -2.4
VPS25Q9BRG1 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC0.08□□□□□ -2.4
VPS25Q9BRG1 AL162395.1-201ENST00000457882 422 ntBASIC0.08□□□□□ -2.4
VPS25Q9BRG1 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.08□□□□□ -2.4
VPS25Q9BRG1 AC104806.1-201ENST00000508720 308 ntBASIC0.08□□□□□ -2.4
VPS25Q9BRG1 RPL23AP94-201ENST00000512518 302 ntBASIC0.08□□□□□ -2.4
VPS25Q9BRG1 AC027338.1-201ENST00000514840 825 ntBASIC0.08□□□□□ -2.4
VPS25Q9BRG1 RNU5F-4P-201ENST00000516581 114 ntBASIC0.08□□□□□ -2.4
VPS25Q9BRG1 AP002453.2-201ENST00000533503 320 ntBASIC0.08□□□□□ -2.4
VPS25Q9BRG1 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.08□□□□□ -2.4
VPS25Q9BRG1 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.08□□□□□ -2.4
VPS25Q9BRG1 AC011195.1-201ENST00000578177 177 ntBASIC0.08□□□□□ -2.4
VPS25Q9BRG1 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms