Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC080013.2-201ENST00000460866 323 ntBASIC4.39□□□□□ -1.71
USB1Q9BQ65 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.39□□□□□ -1.71
USB1Q9BQ65 AL110118.1-201ENST00000553543 400 ntBASIC4.39□□□□□ -1.71
USB1Q9BQ65 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.39□□□□□ -1.71
USB1Q9BQ65 AC022655.2-201ENST00000577280 318 ntBASIC4.39□□□□□ -1.71
USB1Q9BQ65 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.39□□□□□ -1.71
USB1Q9BQ65 AP005432.2-201ENST00000608162 586 ntBASIC4.39□□□□□ -1.71
USB1Q9BQ65 AL591926.8-201ENST00000616876 211 ntBASIC4.39□□□□□ -1.71
USB1Q9BQ65 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
USB1Q9BQ65 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
USB1Q9BQ65 AC103988.1-201ENST00000566382 2177 ntBASIC4.38□□□□□ -1.71
USB1Q9BQ65 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.38□□□□□ -1.71
USB1Q9BQ65 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
USB1Q9BQ65 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC4.38□□□□□ -1.71
USB1Q9BQ65 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
USB1Q9BQ65 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
USB1Q9BQ65 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.38□□□□□ -1.71
USB1Q9BQ65 RNU6-640P-201ENST00000363693 105 ntBASIC4.38□□□□□ -1.71
USB1Q9BQ65 AL133412.1-201ENST00000380194 2992 ntBASIC4.38□□□□□ -1.71
USB1Q9BQ65 RNA5SP87-201ENST00000384155 118 ntBASIC4.38□□□□□ -1.71
USB1Q9BQ65 MIR1283-1-201ENST00000408494 87 ntBASIC4.38□□□□□ -1.71
USB1Q9BQ65 RNY4P29-201ENST00000410801 97 ntBASIC4.38□□□□□ -1.71
USB1Q9BQ65 RPL37P18-201ENST00000411602 243 ntBASIC4.38□□□□□ -1.71
USB1Q9BQ65 MTATP6P21-201ENST00000440681 189 ntBASIC4.38□□□□□ -1.71
USB1Q9BQ65 AL021397.1-201ENST00000451806 248 ntBASIC4.38□□□□□ -1.71
USB1Q9BQ65 ENPP7P9-201ENST00000514456 627 ntBASIC4.38□□□□□ -1.71
USB1Q9BQ65 RPL23AP91-201ENST00000569211 455 ntBASIC4.38□□□□□ -1.71
USB1Q9BQ65 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.38□□□□□ -1.71
USB1Q9BQ65 AL672296.1-201ENST00000427780 2158 ntBASIC4.38□□□□□ -1.71
USB1Q9BQ65 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
USB1Q9BQ65 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.38□□□□□ -1.71
USB1Q9BQ65 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
USB1Q9BQ65 AC011266.1-201ENST00000624119 3569 ntBASIC4.38□□□□□ -1.71
USB1Q9BQ65 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
USB1Q9BQ65 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
USB1Q9BQ65 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
USB1Q9BQ65 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
USB1Q9BQ65 RNU6-766P-201ENST00000362478 107 ntBASIC4.37□□□□□ -1.71
USB1Q9BQ65 SNORD32B-201ENST00000364460 84 ntBASIC4.37□□□□□ -1.71
USB1Q9BQ65 MIR624-201ENST00000385217 97 ntBASIC4.37□□□□□ -1.71
USB1Q9BQ65 MIR300-201ENST00000401138 83 ntBASIC4.37□□□□□ -1.71
USB1Q9BQ65 MIR891A-201ENST00000401237 79 ntBASIC4.37□□□□□ -1.71
USB1Q9BQ65 SNORA77-201ENST00000408716 125 ntBASIC4.37□□□□□ -1.71
USB1Q9BQ65 RNA5SP127-201ENST00000411051 133 ntBASIC4.37□□□□□ -1.71
USB1Q9BQ65 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.37□□□□□ -1.71
USB1Q9BQ65 AC010531.2-201ENST00000465012 153 ntBASIC4.37□□□□□ -1.71
USB1Q9BQ65 RPS29P22-201ENST00000472363 168 ntBASIC4.37□□□□□ -1.71
USB1Q9BQ65 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC4.37□□□□□ -1.71
USB1Q9BQ65 RNU1-104P-201ENST00000517280 175 ntBASIC4.37□□□□□ -1.71
USB1Q9BQ65 AC015720.1-201ENST00000565251 277 ntBASIC4.37□□□□□ -1.71
USB1Q9BQ65 MIR4436B2-201ENST00000581415 91 ntBASIC4.37□□□□□ -1.71
USB1Q9BQ65 MIR2681-201ENST00000581814 105 ntBASIC4.37□□□□□ -1.71
USB1Q9BQ65 MIR4436B1-201ENST00000583272 91 ntBASIC4.37□□□□□ -1.71
USB1Q9BQ65 MIR4737-201ENST00000583979 81 ntBASIC4.37□□□□□ -1.71
USB1Q9BQ65 MIR4753-201ENST00000585119 83 ntBASIC4.37□□□□□ -1.71
USB1Q9BQ65 AL929325.1-201ENST00000603096 117 ntBASIC4.37□□□□□ -1.71
USB1Q9BQ65 Mico1.1-201ENST00000611698 204 ntBASIC4.37□□□□□ -1.71
USB1Q9BQ65 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
USB1Q9BQ65 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
USB1Q9BQ65 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
USB1Q9BQ65 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.37□□□□□ -1.71
USB1Q9BQ65 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.36□□□□□ -1.71
USB1Q9BQ65 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.36□□□□□ -1.71
USB1Q9BQ65 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.36□□□□□ -1.71
USB1Q9BQ65 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.36□□□□□ -1.71
USB1Q9BQ65 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
USB1Q9BQ65 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.36□□□□□ -1.71
USB1Q9BQ65 RNA5SP513-201ENST00000364648 118 ntBASIC4.36□□□□□ -1.71
USB1Q9BQ65 RNA5SP125-201ENST00000364843 120 ntBASIC4.36□□□□□ -1.71
USB1Q9BQ65 AC114755.2-201ENST00000413520 361 ntBASIC4.36□□□□□ -1.71
USB1Q9BQ65 AC007738.1-201ENST00000413892 348 ntBASIC4.36□□□□□ -1.71
USB1Q9BQ65 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.36□□□□□ -1.71
USB1Q9BQ65 AC069285.2-201ENST00000440210 275 ntBASIC4.36□□□□□ -1.71
USB1Q9BQ65 RPL34P20-201ENST00000442771 351 ntBASIC4.36□□□□□ -1.71
USB1Q9BQ65 AC010618.1-201ENST00000469924 477 ntBASIC4.36□□□□□ -1.71
USB1Q9BQ65 IGKV1-22-201ENST00000524313 326 ntBASIC4.36□□□□□ -1.71
USB1Q9BQ65 PRELID2P1-201ENST00000552837 301 ntBASIC4.36□□□□□ -1.71
USB1Q9BQ65 MIR4700-201ENST00000578311 74 ntBASIC4.36□□□□□ -1.71
USB1Q9BQ65 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.36□□□□□ -1.71
USB1Q9BQ65 MIR8069-1-201ENST00000616627 86 ntBASIC4.36□□□□□ -1.71
USB1Q9BQ65 AP001318.4-201ENST00000616637 121 ntBASIC4.36□□□□□ -1.71
USB1Q9BQ65 MIR8069-2-201ENST00000621412 86 ntBASIC4.36□□□□□ -1.71
USB1Q9BQ65 AC019206.1-201ENST00000621938 425 ntBASIC4.36□□□□□ -1.71
USB1Q9BQ65 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
USB1Q9BQ65 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.36□□□□□ -1.71
USB1Q9BQ65 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.36□□□□□ -1.71
USB1Q9BQ65 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.36□□□□□ -1.71
USB1Q9BQ65 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
USB1Q9BQ65 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
USB1Q9BQ65 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
USB1Q9BQ65 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
USB1Q9BQ65 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
USB1Q9BQ65 Y_RNA.203-201ENST00000364106 102 ntBASIC4.35□□□□□ -1.71
USB1Q9BQ65 Y_RNA.388-201ENST00000383919 113 ntBASIC4.35□□□□□ -1.71
USB1Q9BQ65 RNU6-756P-201ENST00000383997 107 ntBASIC4.35□□□□□ -1.71
USB1Q9BQ65 Y_RNA.528-201ENST00000384575 108 ntBASIC4.35□□□□□ -1.71
USB1Q9BQ65 Z98745.1-201ENST00000402553 494 ntBASIC4.35□□□□□ -1.71
USB1Q9BQ65 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.35□□□□□ -1.71
USB1Q9BQ65 HMGN2P32-201ENST00000444648 269 ntBASIC4.35□□□□□ -1.71
USB1Q9BQ65 snoU13.20-201ENST00000459180 104 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms