Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.56□□□□□ -2.16
FOXC2Q99958 MTND5P26-201ENST00000426018 1752 ntBASIC1.56□□□□□ -2.16
FOXC2Q99958 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
FOXC2Q99958 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
FOXC2Q99958 Y_RNA.194-201ENST00000363985 102 ntBASIC1.55□□□□□ -2.16
FOXC2Q99958 RNU6-392P-201ENST00000364926 101 ntBASIC1.55□□□□□ -2.16
FOXC2Q99958 RNU6-715P-201ENST00000365204 103 ntBASIC1.55□□□□□ -2.16
FOXC2Q99958 RNU6-116P-201ENST00000384042 109 ntBASIC1.55□□□□□ -2.16
FOXC2Q99958 RNU6-45P-201ENST00000384471 107 ntBASIC1.55□□□□□ -2.16
FOXC2Q99958 RNU6-1127P-201ENST00000384580 107 ntBASIC1.55□□□□□ -2.16
FOXC2Q99958 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
FOXC2Q99958 RNU6-903P-201ENST00000391270 109 ntBASIC1.55□□□□□ -2.16
FOXC2Q99958 AC068050.1-201ENST00000394891 380 ntBASIC1.55□□□□□ -2.16
FOXC2Q99958 RAP1BP3-201ENST00000407180 549 ntBASIC1.55□□□□□ -2.16
FOXC2Q99958 RNU4-46P-201ENST00000410818 138 ntBASIC1.55□□□□□ -2.16
FOXC2Q99958 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.55□□□□□ -2.16
FOXC2Q99958 EIF1AXP1-201ENST00000419267 435 ntBASIC1.55□□□□□ -2.16
FOXC2Q99958 VN1R108P-201ENST00000431580 830 ntBASIC1.55□□□□□ -2.16
FOXC2Q99958 PRELID3BP1-201ENST00000457142 540 ntBASIC1.55□□□□□ -2.16
FOXC2Q99958 PPP1R2P5-201ENST00000457256 603 ntBASIC1.55□□□□□ -2.16
FOXC2Q99958 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.55□□□□□ -2.16
FOXC2Q99958 RPS29P15-201ENST00000458329 171 ntBASIC1.55□□□□□ -2.16
FOXC2Q99958 RNU7-95P-201ENST00000459222 64 ntBASIC1.55□□□□□ -2.16
FOXC2Q99958 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.55□□□□□ -2.16
FOXC2Q99958 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.55□□□□□ -2.16
FOXC2Q99958 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.55□□□□□ -2.16
FOXC2Q99958 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
FOXC2Q99958 MTCO3P7-201ENST00000510008 774 ntBASIC1.55□□□□□ -2.16
FOXC2Q99958 PTP4A1P4-201ENST00000512479 322 ntBASIC1.55□□□□□ -2.16
FOXC2Q99958 MTND3P5-201ENST00000512798 333 ntBASIC1.55□□□□□ -2.16
FOXC2Q99958 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.55□□□□□ -2.16
FOXC2Q99958 LRRC34P2-201ENST00000514850 553 ntBASIC1.55□□□□□ -2.16
FOXC2Q99958 RNA5SP503-201ENST00000517047 117 ntBASIC1.55□□□□□ -2.16
FOXC2Q99958 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.55□□□□□ -2.16
FOXC2Q99958 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.55□□□□□ -2.16
FOXC2Q99958 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.55□□□□□ -2.16
FOXC2Q99958 MIR5692A1-201ENST00000580523 69 ntBASIC1.55□□□□□ -2.16
FOXC2Q99958 MIR4303-201ENST00000581299 66 ntBASIC1.55□□□□□ -2.16
FOXC2Q99958 AC103987.3-201ENST00000582071 292 ntBASIC1.55□□□□□ -2.16
FOXC2Q99958 MIR3935-201ENST00000583472 104 ntBASIC1.55□□□□□ -2.16
FOXC2Q99958 MIR4424-201ENST00000585257 86 ntBASIC1.55□□□□□ -2.16
FOXC2Q99958 AC009314.1-201ENST00000603871 304 ntBASIC1.55□□□□□ -2.16
FOXC2Q99958 AC008945.2-201ENST00000606056 604 ntBASIC1.55□□□□□ -2.16
FOXC2Q99958 AP001330.5-201ENST00000607176 411 ntBASIC1.55□□□□□ -2.16
FOXC2Q99958 Z82243.1-201ENST00000609432 473 ntBASIC1.55□□□□□ -2.16
FOXC2Q99958 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.55□□□□□ -2.16
FOXC2Q99958 U6.114-201ENST00000636407 96 ntBASIC1.55□□□□□ -2.16
FOXC2Q99958 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.55□□□□□ -2.16
FOXC2Q99958 AL391987.6-201ENST00000305671 199 ntBASIC1.54□□□□□ -2.16
FOXC2Q99958 RNU6-1287P-201ENST00000362914 107 ntBASIC1.54□□□□□ -2.16
FOXC2Q99958 SNORD115-3-201ENST00000363100 82 ntBASIC1.54□□□□□ -2.16
FOXC2Q99958 Y_RNA.327-201ENST00000365201 102 ntBASIC1.54□□□□□ -2.16
FOXC2Q99958 Y_RNA.399-201ENST00000383955 105 ntBASIC1.54□□□□□ -2.16
FOXC2Q99958 RNU6-259P-201ENST00000383999 107 ntBASIC1.54□□□□□ -2.16
FOXC2Q99958 RNU6-1060P-201ENST00000384664 107 ntBASIC1.54□□□□□ -2.16
FOXC2Q99958 MIR29B2-201ENST00000385055 81 ntBASIC1.54□□□□□ -2.16
FOXC2Q99958 SNORA16.2-201ENST00000390991 127 ntBASIC1.54□□□□□ -2.16
FOXC2Q99958 MIR1294-201ENST00000408503 142 ntBASIC1.54□□□□□ -2.16
FOXC2Q99958 RNU2-9P-201ENST00000410194 145 ntBASIC1.54□□□□□ -2.16
FOXC2Q99958 RNU2-29P-201ENST00000410423 189 ntBASIC1.54□□□□□ -2.16
FOXC2Q99958 RNU2-16P-201ENST00000410712 136 ntBASIC1.54□□□□□ -2.16
FOXC2Q99958 RNA5SP111-201ENST00000411386 101 ntBASIC1.54□□□□□ -2.16
FOXC2Q99958 SRIP3-201ENST00000413200 219 ntBASIC1.54□□□□□ -2.16
FOXC2Q99958 PGBD4P6-201ENST00000421501 610 ntBASIC1.54□□□□□ -2.16
FOXC2Q99958 EIF4EP2-201ENST00000422816 654 ntBASIC1.54□□□□□ -2.16
FOXC2Q99958 AC073464.1-201ENST00000429823 534 ntBASIC1.54□□□□□ -2.16
FOXC2Q99958 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.54□□□□□ -2.16
FOXC2Q99958 AL353752.1-201ENST00000454946 260 ntBASIC1.54□□□□□ -2.16
FOXC2Q99958 RPL30P1-201ENST00000488676 339 ntBASIC1.54□□□□□ -2.16
FOXC2Q99958 MTCYBP40-201ENST00000509390 1135 ntBASIC1.54□□□□□ -2.16
FOXC2Q99958 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.54□□□□□ -2.16
FOXC2Q99958 RNU2-69P-201ENST00000516061 100 ntBASIC1.54□□□□□ -2.16
FOXC2Q99958 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.54□□□□□ -2.16
FOXC2Q99958 AP003034.1-201ENST00000534621 422 ntBASIC1.54□□□□□ -2.16
FOXC2Q99958 MTATP6P3-201ENST00000581686 676 ntBASIC1.54□□□□□ -2.16
FOXC2Q99958 MIR5002-201ENST00000584713 97 ntBASIC1.54□□□□□ -2.16
FOXC2Q99958 BNIP3P25-201ENST00000596023 559 ntBASIC1.54□□□□□ -2.16
FOXC2Q99958 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.54□□□□□ -2.16
FOXC2Q99958 Z69720.2-201ENST00000624755 279 ntBASIC1.54□□□□□ -2.16
FOXC2Q99958 Y_RNA.1-201ENST00000352915 104 ntBASIC1.53□□□□□ -2.16
FOXC2Q99958 RNU6-212P-201ENST00000362642 104 ntBASIC1.53□□□□□ -2.16
FOXC2Q99958 SNORD56.1-201ENST00000362913 68 ntBASIC1.53□□□□□ -2.16
FOXC2Q99958 RNU6-944P-201ENST00000364023 107 ntBASIC1.53□□□□□ -2.16
FOXC2Q99958 SNORD14D-201ENST00000384390 87 ntBASIC1.53□□□□□ -2.16
FOXC2Q99958 RNY1P14-201ENST00000384426 108 ntBASIC1.53□□□□□ -2.16
FOXC2Q99958 RNU11-3P-201ENST00000391111 133 ntBASIC1.53□□□□□ -2.16
FOXC2Q99958 AC004965.1-201ENST00000413033 213 ntBASIC1.53□□□□□ -2.16
FOXC2Q99958 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
FOXC2Q99958 BX510359.4-201ENST00000423750 193 ntBASIC1.53□□□□□ -2.16
FOXC2Q99958 AL451074.3-201ENST00000437709 472 ntBASIC1.53□□□□□ -2.16
FOXC2Q99958 AC073415.1-201ENST00000449240 153 ntBASIC1.53□□□□□ -2.16
FOXC2Q99958 RNU7-180P-201ENST00000459240 63 ntBASIC1.53□□□□□ -2.16
FOXC2Q99958 RPS3AP17-201ENST00000472594 777 ntBASIC1.53□□□□□ -2.16
FOXC2Q99958 RN7SL274P-201ENST00000492268 272 ntBASIC1.53□□□□□ -2.16
FOXC2Q99958 HMGB3P17-201ENST00000504195 649 ntBASIC1.53□□□□□ -2.16
FOXC2Q99958 AC074344.1-201ENST00000512823 224 ntBASIC1.53□□□□□ -2.16
FOXC2Q99958 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.53□□□□□ -2.16
FOXC2Q99958 SNORA40.12-201ENST00000516329 111 ntBASIC1.53□□□□□ -2.16
FOXC2Q99958 SNORA25.17-201ENST00000517184 124 ntBASIC1.53□□□□□ -2.16
FOXC2Q99958 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms