Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.26□□□□□ -2.05
CDCA3Q99618 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.26□□□□□ -2.05
CDCA3Q99618 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.26□□□□□ -2.05
CDCA3Q99618 AF235103.2-201ENST00000525753 346 ntBASIC2.26□□□□□ -2.05
CDCA3Q99618 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.26□□□□□ -2.05
CDCA3Q99618 PSMA3P-201ENST00000555485 635 ntBASIC2.26□□□□□ -2.05
CDCA3Q99618 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.26□□□□□ -2.05
CDCA3Q99618 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.26□□□□□ -2.05
CDCA3Q99618 MIR5694-201ENST00000581190 76 ntBASIC2.26□□□□□ -2.05
CDCA3Q99618 AC105245.1-201ENST00000581934 244 ntBASIC2.26□□□□□ -2.05
CDCA3Q99618 AC073410.2-201ENST00000603240 332 ntBASIC2.26□□□□□ -2.05
CDCA3Q99618 ELOCP5-201ENST00000604924 333 ntBASIC2.26□□□□□ -2.05
CDCA3Q99618 FAM157A-202ENST00000615155 405 ntBASIC2.26□□□□□ -2.05
CDCA3Q99618 MIR203B-201ENST00000636080 86 ntBASIC2.26□□□□□ -2.05
CDCA3Q99618 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.26□□□□□ -2.05
CDCA3Q99618 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
CDCA3Q99618 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CDCA3Q99618 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.25□□□□□ -2.05
CDCA3Q99618 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CDCA3Q99618 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CDCA3Q99618 RNU6-212P-201ENST00000362642 104 ntBASIC2.25□□□□□ -2.05
CDCA3Q99618 Y_RNA.86-201ENST00000363020 111 ntBASIC2.25□□□□□ -2.05
CDCA3Q99618 Y_RNA.100-201ENST00000363141 102 ntBASIC2.25□□□□□ -2.05
CDCA3Q99618 Y_RNA.157-201ENST00000363638 102 ntBASIC2.25□□□□□ -2.05
CDCA3Q99618 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
CDCA3Q99618 MIR583-201ENST00000384846 75 ntBASIC2.25□□□□□ -2.05
CDCA3Q99618 MIR186-201ENST00000384988 86 ntBASIC2.25□□□□□ -2.05
CDCA3Q99618 RPS29P13-201ENST00000402041 169 ntBASIC2.25□□□□□ -2.05
CDCA3Q99618 RNU2-23P-201ENST00000410545 195 ntBASIC2.25□□□□□ -2.05
CDCA3Q99618 VN1R36P-201ENST00000414936 291 ntBASIC2.25□□□□□ -2.05
CDCA3Q99618 AC009161.1-201ENST00000417306 376 ntBASIC2.25□□□□□ -2.05
CDCA3Q99618 AL513185.2-201ENST00000425543 193 ntBASIC2.25□□□□□ -2.05
CDCA3Q99618 MTCO2P3-201ENST00000442543 421 ntBASIC2.25□□□□□ -2.05
CDCA3Q99618 AC124916.1-201ENST00000444020 547 ntBASIC2.25□□□□□ -2.05
CDCA3Q99618 RNU6-1037P-201ENST00000459571 107 ntBASIC2.25□□□□□ -2.05
CDCA3Q99618 RPL39P5-202ENST00000512505 151 ntBASIC2.25□□□□□ -2.05
CDCA3Q99618 RNA5SP182-201ENST00000516064 82 ntBASIC2.25□□□□□ -2.05
CDCA3Q99618 RNU6-1314P-201ENST00000517139 104 ntBASIC2.25□□□□□ -2.05
CDCA3Q99618 AC109329.1-201ENST00000518744 317 ntBASIC2.25□□□□□ -2.05
CDCA3Q99618 MIR5571-201ENST00000577998 113 ntBASIC2.25□□□□□ -2.05
CDCA3Q99618 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.25□□□□□ -2.05
CDCA3Q99618 BNIP3P16-201ENST00000589779 534 ntBASIC2.25□□□□□ -2.05
CDCA3Q99618 AC006504.8-201ENST00000621046 635 ntBASIC2.25□□□□□ -2.05
CDCA3Q99618 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.25□□□□□ -2.05
CDCA3Q99618 AC131280.1-202ENST00000624067 4211 ntBASIC2.25□□□□□ -2.05
CDCA3Q99618 Y_RNA.40-201ENST00000362645 93 ntBASIC2.24□□□□□ -2.05
CDCA3Q99618 U3.13-201ENST00000364804 214 ntBASIC2.24□□□□□ -2.05
CDCA3Q99618 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CDCA3Q99618 MIR524-201ENST00000385242 87 ntBASIC2.24□□□□□ -2.05
CDCA3Q99618 RNU6-1148P-201ENST00000410992 104 ntBASIC2.24□□□□□ -2.05
CDCA3Q99618 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.24□□□□□ -2.05
CDCA3Q99618 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.24□□□□□ -2.05
CDCA3Q99618 AC008267.5-201ENST00000424928 265 ntBASIC2.24□□□□□ -2.05
CDCA3Q99618 RPS15AP10-201ENST00000432472 382 ntBASIC2.24□□□□□ -2.05
CDCA3Q99618 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.24□□□□□ -2.05
CDCA3Q99618 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.24□□□□□ -2.05
CDCA3Q99618 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.24□□□□□ -2.05
CDCA3Q99618 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.24□□□□□ -2.05
CDCA3Q99618 AMD1P1-201ENST00000457220 922 ntBASIC2.24□□□□□ -2.05
CDCA3Q99618 RNU7-66P-201ENST00000459469 62 ntBASIC2.24□□□□□ -2.05
CDCA3Q99618 AC080013.2-201ENST00000460866 323 ntBASIC2.24□□□□□ -2.05
CDCA3Q99618 AC090096.1-201ENST00000489168 390 ntBASIC2.24□□□□□ -2.05
CDCA3Q99618 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.24□□□□□ -2.05
CDCA3Q99618 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.24□□□□□ -2.05
CDCA3Q99618 RNU2-53P-201ENST00000516257 147 ntBASIC2.24□□□□□ -2.05
CDCA3Q99618 Y_RNA.673-201ENST00000516306 88 ntBASIC2.24□□□□□ -2.05
CDCA3Q99618 RNU6-358P-201ENST00000516564 75 ntBASIC2.24□□□□□ -2.05
CDCA3Q99618 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.24□□□□□ -2.05
CDCA3Q99618 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.24□□□□□ -2.05
CDCA3Q99618 AC026371.1-201ENST00000551867 419 ntBASIC2.24□□□□□ -2.05
CDCA3Q99618 RPL30P11-203ENST00000598995 310 ntBASIC2.24□□□□□ -2.05
CDCA3Q99618 AC068944.2-201ENST00000610373 403 ntBASIC2.24□□□□□ -2.05
CDCA3Q99618 AC093913.1-201ENST00000614178 329 ntBASIC2.24□□□□□ -2.05
CDCA3Q99618 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CDCA3Q99618 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.24□□□□□ -2.05
CDCA3Q99618 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.24□□□□□ -2.05
CDCA3Q99618 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CDCA3Q99618 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.23□□□□□ -2.05
CDCA3Q99618 Y_RNA.414-201ENST00000384011 101 ntBASIC2.23□□□□□ -2.05
CDCA3Q99618 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.23□□□□□ -2.05
CDCA3Q99618 RPL30P16-201ENST00000419341 429 ntBASIC2.23□□□□□ -2.05
CDCA3Q99618 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.23□□□□□ -2.05
CDCA3Q99618 MTND1P2-201ENST00000430604 821 ntBASIC2.23□□□□□ -2.05
CDCA3Q99618 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.23□□□□□ -2.05
CDCA3Q99618 USP9YP8-201ENST00000441913 500 ntBASIC2.23□□□□□ -2.05
CDCA3Q99618 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.23□□□□□ -2.05
CDCA3Q99618 HMGB3P3-201ENST00000510526 400 ntBASIC2.23□□□□□ -2.05
CDCA3Q99618 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.23□□□□□ -2.05
CDCA3Q99618 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.23□□□□□ -2.05
CDCA3Q99618 AC023824.2-201ENST00000566185 400 ntBASIC2.23□□□□□ -2.05
CDCA3Q99618 MIR3672-201ENST00000584290 82 ntBASIC2.23□□□□□ -2.05
CDCA3Q99618 AC018638.8-201ENST00000588755 281 ntBASIC2.23□□□□□ -2.05
CDCA3Q99618 VN1R107P-201ENST00000601784 209 ntBASIC2.23□□□□□ -2.05
CDCA3Q99618 AC009314.1-201ENST00000603871 304 ntBASIC2.23□□□□□ -2.05
CDCA3Q99618 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CDCA3Q99618 MIR6845-201ENST00000613182 61 ntBASIC2.23□□□□□ -2.05
CDCA3Q99618 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CDCA3Q99618 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.23□□□□□ -2.05
CDCA3Q99618 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
CDCA3Q99618 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 166.6 ms