Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.47□□□□□ -1.85
CDK5RAP1Q96SZ6 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.47□□□□□ -1.85
CDK5RAP1Q96SZ6 MTCO1P5-201ENST00000433573 344 ntBASIC3.47□□□□□ -1.85
CDK5RAP1Q96SZ6 AC005002.2-201ENST00000438228 269 ntBASIC3.47□□□□□ -1.85
CDK5RAP1Q96SZ6 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.47□□□□□ -1.85
CDK5RAP1Q96SZ6 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.47□□□□□ -1.85
CDK5RAP1Q96SZ6 PHBP14-201ENST00000512887 367 ntBASIC3.47□□□□□ -1.85
CDK5RAP1Q96SZ6 RNU7-175P-201ENST00000515915 61 ntBASIC3.47□□□□□ -1.85
CDK5RAP1Q96SZ6 RNU6-143P-201ENST00000516942 93 ntBASIC3.47□□□□□ -1.85
CDK5RAP1Q96SZ6 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.47□□□□□ -1.85
CDK5RAP1Q96SZ6 ATP5F1P5-201ENST00000526403 760 ntBASIC3.47□□□□□ -1.85
CDK5RAP1Q96SZ6 AC005476.1-201ENST00000554427 397 ntBASIC3.47□□□□□ -1.85
CDK5RAP1Q96SZ6 AC090617.3-201ENST00000573670 475 ntBASIC3.47□□□□□ -1.85
CDK5RAP1Q96SZ6 MIR4308-201ENST00000580634 81 ntBASIC3.47□□□□□ -1.85
CDK5RAP1Q96SZ6 AC005046.1-201ENST00000608515 625 ntBASIC3.47□□□□□ -1.85
CDK5RAP1Q96SZ6 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.47□□□□□ -1.85
CDK5RAP1Q96SZ6 AL079305.1-201ENST00000623159 3008 ntBASIC3.47□□□□□ -1.85
CDK5RAP1Q96SZ6 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.47□□□□□ -1.85
CDK5RAP1Q96SZ6 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.47□□□□□ -1.85
CDK5RAP1Q96SZ6 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
CDK5RAP1Q96SZ6 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.85
CDK5RAP1Q96SZ6 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.46□□□□□ -1.86
CDK5RAP1Q96SZ6 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CDK5RAP1Q96SZ6 AC058791.1-201ENST00000608412 3198 ntBASIC3.46□□□□□ -1.86
CDK5RAP1Q96SZ6 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CDK5RAP1Q96SZ6 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.46□□□□□ -1.86
CDK5RAP1Q96SZ6 Y_RNA.82-201ENST00000363000 102 ntBASIC3.46□□□□□ -1.86
CDK5RAP1Q96SZ6 Y_RNA.92-201ENST00000363043 102 ntBASIC3.46□□□□□ -1.86
CDK5RAP1Q96SZ6 Y_RNA.235-201ENST00000364412 102 ntBASIC3.46□□□□□ -1.86
CDK5RAP1Q96SZ6 Y_RNA.306-201ENST00000365015 102 ntBASIC3.46□□□□□ -1.86
CDK5RAP1Q96SZ6 Y_RNA.308-201ENST00000365043 101 ntBASIC3.46□□□□□ -1.86
CDK5RAP1Q96SZ6 Y_RNA.312-201ENST00000365089 102 ntBASIC3.46□□□□□ -1.86
CDK5RAP1Q96SZ6 Y_RNA.322-201ENST00000365151 102 ntBASIC3.46□□□□□ -1.86
CDK5RAP1Q96SZ6 MIR487A-201ENST00000385009 80 ntBASIC3.46□□□□□ -1.86
CDK5RAP1Q96SZ6 MIR301A-201ENST00000385261 86 ntBASIC3.46□□□□□ -1.86
CDK5RAP1Q96SZ6 SNORA11.1-201ENST00000408133 129 ntBASIC3.46□□□□□ -1.86
CDK5RAP1Q96SZ6 RNU4-47P-201ENST00000410876 114 ntBASIC3.46□□□□□ -1.86
CDK5RAP1Q96SZ6 Y_RNA.623-201ENST00000411128 95 ntBASIC3.46□□□□□ -1.86
CDK5RAP1Q96SZ6 RNU5E-9P-201ENST00000411164 104 ntBASIC3.46□□□□□ -1.86
CDK5RAP1Q96SZ6 AC005300.1-201ENST00000428401 373 ntBASIC3.46□□□□□ -1.86
CDK5RAP1Q96SZ6 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.46□□□□□ -1.86
CDK5RAP1Q96SZ6 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.46□□□□□ -1.86
CDK5RAP1Q96SZ6 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.46□□□□□ -1.86
CDK5RAP1Q96SZ6 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.46□□□□□ -1.86
CDK5RAP1Q96SZ6 Y_RNA.650-201ENST00000459002 102 ntBASIC3.46□□□□□ -1.86
CDK5RAP1Q96SZ6 AC010285.1-201ENST00000470580 392 ntBASIC3.46□□□□□ -1.86
CDK5RAP1Q96SZ6 AP001025.1-201ENST00000486139 332 ntBASIC3.46□□□□□ -1.86
CDK5RAP1Q96SZ6 MRPL42P6-201ENST00000486397 371 ntBASIC3.46□□□□□ -1.86
CDK5RAP1Q96SZ6 Y_RNA.679-201ENST00000516416 91 ntBASIC3.46□□□□□ -1.86
CDK5RAP1Q96SZ6 Y_RNA.777-201ENST00000516982 102 ntBASIC3.46□□□□□ -1.86
CDK5RAP1Q96SZ6 AC091144.1-201ENST00000519573 138 ntBASIC3.46□□□□□ -1.86
CDK5RAP1Q96SZ6 NDUFB9P3-201ENST00000521269 501 ntBASIC3.46□□□□□ -1.86
CDK5RAP1Q96SZ6 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.46□□□□□ -1.86
CDK5RAP1Q96SZ6 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.46□□□□□ -1.86
CDK5RAP1Q96SZ6 HIGD1AP1-201ENST00000550979 275 ntBASIC3.46□□□□□ -1.86
CDK5RAP1Q96SZ6 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.46□□□□□ -1.86
CDK5RAP1Q96SZ6 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.46□□□□□ -1.86
CDK5RAP1Q96SZ6 AC002545.1-201ENST00000592511 181 ntBASIC3.46□□□□□ -1.86
CDK5RAP1Q96SZ6 Y_RNA.771-201ENST00000598668 102 ntBASIC3.46□□□□□ -1.86
CDK5RAP1Q96SZ6 AP001485.1-201ENST00000604799 199 ntBASIC3.46□□□□□ -1.86
CDK5RAP1Q96SZ6 AC012468.1-201ENST00000604888 430 ntBASIC3.46□□□□□ -1.86
CDK5RAP1Q96SZ6 Y_RNA.789-201ENST00000622480 102 ntBASIC3.46□□□□□ -1.86
CDK5RAP1Q96SZ6 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.46□□□□□ -1.86
CDK5RAP1Q96SZ6 U6.106-201ENST00000636360 105 ntBASIC3.46□□□□□ -1.86
CDK5RAP1Q96SZ6 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CDK5RAP1Q96SZ6 AF117829.1-206ENST00000621883 3802 ntBASIC3.46□□□□□ -1.86
CDK5RAP1Q96SZ6 AC110774.1-201ENST00000623567 2018 ntBASIC3.46□□□□□ -1.86
CDK5RAP1Q96SZ6 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.46□□□□□ -1.86
CDK5RAP1Q96SZ6 RNU6-227P-201ENST00000362865 103 ntBASIC3.45□□□□□ -1.86
CDK5RAP1Q96SZ6 Y_RNA.240-201ENST00000364469 95 ntBASIC3.45□□□□□ -1.86
CDK5RAP1Q96SZ6 RNU6-818P-201ENST00000364837 108 ntBASIC3.45□□□□□ -1.86
CDK5RAP1Q96SZ6 Y_RNA.333-201ENST00000365274 102 ntBASIC3.45□□□□□ -1.86
CDK5RAP1Q96SZ6 RNU6-1074P-201ENST00000383995 104 ntBASIC3.45□□□□□ -1.86
CDK5RAP1Q96SZ6 Y_RNA.446-201ENST00000384178 104 ntBASIC3.45□□□□□ -1.86
CDK5RAP1Q96SZ6 Y_RNA.590-201ENST00000410140 107 ntBASIC3.45□□□□□ -1.86
CDK5RAP1Q96SZ6 RNU2-51P-201ENST00000410708 197 ntBASIC3.45□□□□□ -1.86
CDK5RAP1Q96SZ6 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.45□□□□□ -1.86
CDK5RAP1Q96SZ6 IFNA11P-201ENST00000446352 526 ntBASIC3.45□□□□□ -1.86
CDK5RAP1Q96SZ6 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.45□□□□□ -1.86
CDK5RAP1Q96SZ6 RNA5SP272-201ENST00000516095 111 ntBASIC3.45□□□□□ -1.86
CDK5RAP1Q96SZ6 RNU2-31P-201ENST00000516954 155 ntBASIC3.45□□□□□ -1.86
CDK5RAP1Q96SZ6 SNORA31.20-201ENST00000517111 133 ntBASIC3.45□□□□□ -1.86
CDK5RAP1Q96SZ6 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CDK5RAP1Q96SZ6 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.45□□□□□ -1.86
CDK5RAP1Q96SZ6 MIR5680-201ENST00000577577 84 ntBASIC3.45□□□□□ -1.86
CDK5RAP1Q96SZ6 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.45□□□□□ -1.86
CDK5RAP1Q96SZ6 uc_338.1-201ENST00000612113 180 ntBASIC3.45□□□□□ -1.86
CDK5RAP1Q96SZ6 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.45□□□□□ -1.86
CDK5RAP1Q96SZ6 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.45□□□□□ -1.86
CDK5RAP1Q96SZ6 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.45□□□□□ -1.86
CDK5RAP1Q96SZ6 RBBP8P1-201ENST00000449447 1844 ntBASIC3.44□□□□□ -1.86
CDK5RAP1Q96SZ6 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CDK5RAP1Q96SZ6 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CDK5RAP1Q96SZ6 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
CDK5RAP1Q96SZ6 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CDK5RAP1Q96SZ6 MIR412-201ENST00000362142 91 ntBASIC3.44□□□□□ -1.86
CDK5RAP1Q96SZ6 RNA5SP387-201ENST00000364226 106 ntBASIC3.44□□□□□ -1.86
CDK5RAP1Q96SZ6 RNU6-879P-201ENST00000364328 108 ntBASIC3.44□□□□□ -1.86
CDK5RAP1Q96SZ6 Y_RNA.275-201ENST00000364726 110 ntBASIC3.44□□□□□ -1.86
CDK5RAP1Q96SZ6 SNORD50.2-201ENST00000365465 70 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 226.4 ms