Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 AC063976.4-201ENST00000421971 163 ntBASIC0.5□□□□□ -2.33
LYSMD1Q96S90 AL008629.1-201ENST00000438615 184 ntBASIC0.5□□□□□ -2.33
LYSMD1Q96S90 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC0.5□□□□□ -2.33
LYSMD1Q96S90 RNU6-498P-201ENST00000459468 107 ntBASIC0.5□□□□□ -2.33
LYSMD1Q96S90 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.5□□□□□ -2.33
LYSMD1Q96S90 RAP1BP2-201ENST00000478270 544 ntBASIC0.5□□□□□ -2.33
LYSMD1Q96S90 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.5□□□□□ -2.33
LYSMD1Q96S90 MTCO3P28-201ENST00000513351 515 ntBASIC0.5□□□□□ -2.33
LYSMD1Q96S90 RNU6-405P-201ENST00000516637 110 ntBASIC0.5□□□□□ -2.33
LYSMD1Q96S90 RNU6-467P-201ENST00000517027 110 ntBASIC0.5□□□□□ -2.33
LYSMD1Q96S90 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.5□□□□□ -2.33
LYSMD1Q96S90 AC008507.2-201ENST00000588402 1176 ntBASIC0.5□□□□□ -2.33
LYSMD1Q96S90 AL158032.1-201ENST00000605401 106 ntBASIC0.5□□□□□ -2.33
LYSMD1Q96S90 AC097372.5-201ENST00000623665 376 ntBASIC0.5□□□□□ -2.33
LYSMD1Q96S90 RNU1-96P-201ENST00000364163 162 ntBASIC0.49□□□□□ -2.33
LYSMD1Q96S90 RNU6-621P-201ENST00000364752 109 ntBASIC0.49□□□□□ -2.33
LYSMD1Q96S90 RNU6-1179P-201ENST00000384667 107 ntBASIC0.49□□□□□ -2.33
LYSMD1Q96S90 RNU1-139P-201ENST00000391307 165 ntBASIC0.49□□□□□ -2.33
LYSMD1Q96S90 AL117342.1-201ENST00000404861 406 ntBASIC0.49□□□□□ -2.33
LYSMD1Q96S90 MTCO1P21-201ENST00000416634 589 ntBASIC0.49□□□□□ -2.33
LYSMD1Q96S90 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC0.49□□□□□ -2.33
LYSMD1Q96S90 RPL23AP30-201ENST00000432419 501 ntBASIC0.49□□□□□ -2.33
LYSMD1Q96S90 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.49□□□□□ -2.33
LYSMD1Q96S90 SNORA31.4-201ENST00000516049 129 ntBASIC0.49□□□□□ -2.33
LYSMD1Q96S90 RNA5SP168-201ENST00000516642 112 ntBASIC0.49□□□□□ -2.33
LYSMD1Q96S90 AC115990.1-201ENST00000526957 301 ntBASIC0.49□□□□□ -2.33
LYSMD1Q96S90 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.49□□□□□ -2.33
LYSMD1Q96S90 MIR4709-201ENST00000577272 72 ntBASIC0.49□□□□□ -2.33
LYSMD1Q96S90 AL596327.1-201ENST00000603629 213 ntBASIC0.49□□□□□ -2.33
LYSMD1Q96S90 AC104073.3-201ENST00000610942 955 ntBASIC0.49□□□□□ -2.33
LYSMD1Q96S90 AC084824.5-201ENST00000612009 413 ntBASIC0.49□□□□□ -2.33
LYSMD1Q96S90 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.49□□□□□ -2.33
LYSMD1Q96S90 U6.42-201ENST00000618440 107 ntBASIC0.49□□□□□ -2.33
LYSMD1Q96S90 MTND4P16-201ENST00000466108 1367 ntBASIC0.48□□□□□ -2.33
LYSMD1Q96S90 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
LYSMD1Q96S90 RNU4-15P-201ENST00000362613 141 ntBASIC0.48□□□□□ -2.33
LYSMD1Q96S90 RNU4-79P-201ENST00000362764 141 ntBASIC0.48□□□□□ -2.33
LYSMD1Q96S90 MIR544A-201ENST00000384855 91 ntBASIC0.48□□□□□ -2.33
LYSMD1Q96S90 MIR200A-201ENST00000384875 90 ntBASIC0.48□□□□□ -2.33
LYSMD1Q96S90 SNORD12-201ENST00000391002 90 ntBASIC0.48□□□□□ -2.33
LYSMD1Q96S90 RNU4-22P-201ENST00000411058 166 ntBASIC0.48□□□□□ -2.33
LYSMD1Q96S90 RPS3AP1-201ENST00000413190 320 ntBASIC0.48□□□□□ -2.33
LYSMD1Q96S90 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.48□□□□□ -2.33
LYSMD1Q96S90 RPS26P5-201ENST00000418544 335 ntBASIC0.48□□□□□ -2.33
LYSMD1Q96S90 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.48□□□□□ -2.33
LYSMD1Q96S90 AC007969.2-201ENST00000441891 191 ntBASIC0.48□□□□□ -2.33
LYSMD1Q96S90 SNRPGP7-201ENST00000469016 106 ntBASIC0.48□□□□□ -2.33
LYSMD1Q96S90 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.48□□□□□ -2.33
LYSMD1Q96S90 AC109445.1-201ENST00000512356 383 ntBASIC0.48□□□□□ -2.33
LYSMD1Q96S90 RNA5SP216-201ENST00000516111 123 ntBASIC0.48□□□□□ -2.33
LYSMD1Q96S90 AC013828.2-201ENST00000532487 235 ntBASIC0.48□□□□□ -2.33
LYSMD1Q96S90 AC025423.5-201ENST00000550230 219 ntBASIC0.48□□□□□ -2.33
LYSMD1Q96S90 AL442163.3-201ENST00000554110 156 ntBASIC0.48□□□□□ -2.33
LYSMD1Q96S90 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.48□□□□□ -2.33
LYSMD1Q96S90 KC877982.1-201ENST00000602313 470 ntBASIC0.48□□□□□ -2.33
LYSMD1Q96S90 AC091965.4-201ENST00000607691 587 ntBASIC0.48□□□□□ -2.33
LYSMD1Q96S90 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.48□□□□□ -2.33
LYSMD1Q96S90 RNU6-1123P-201ENST00000362347 106 ntBASIC0.47□□□□□ -2.33
LYSMD1Q96S90 RNU6-462P-201ENST00000362659 105 ntBASIC0.47□□□□□ -2.33
LYSMD1Q96S90 RNU6-560P-201ENST00000364007 108 ntBASIC0.47□□□□□ -2.33
LYSMD1Q96S90 RNU6-910P-201ENST00000390844 107 ntBASIC0.47□□□□□ -2.33
LYSMD1Q96S90 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.47□□□□□ -2.33
LYSMD1Q96S90 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.47□□□□□ -2.33
LYSMD1Q96S90 AC073910.1-201ENST00000445047 438 ntBASIC0.47□□□□□ -2.33
LYSMD1Q96S90 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.47□□□□□ -2.33
LYSMD1Q96S90 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.47□□□□□ -2.33
LYSMD1Q96S90 AC079395.1-201ENST00000510981 262 ntBASIC0.47□□□□□ -2.33
LYSMD1Q96S90 AP003049.1-201ENST00000529418 457 ntBASIC0.47□□□□□ -2.33
LYSMD1Q96S90 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.47□□□□□ -2.33
LYSMD1Q96S90 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.47□□□□□ -2.33
LYSMD1Q96S90 AC009712.1-201ENST00000564938 316 ntBASIC0.47□□□□□ -2.33
LYSMD1Q96S90 MIR544B-201ENST00000582372 78 ntBASIC0.47□□□□□ -2.33
LYSMD1Q96S90 MIR548AC-201ENST00000585049 88 ntBASIC0.47□□□□□ -2.33
LYSMD1Q96S90 AC110760.3-201ENST00000598794 467 ntBASIC0.47□□□□□ -2.33
LYSMD1Q96S90 AC068620.3-201ENST00000602749 560 ntBASIC0.47□□□□□ -2.33
LYSMD1Q96S90 AL034555.1-201ENST00000604816 211 ntBASIC0.47□□□□□ -2.33
LYSMD1Q96S90 AC108747.1-201ENST00000609508 535 ntBASIC0.47□□□□□ -2.33
LYSMD1Q96S90 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.47□□□□□ -2.33
LYSMD1Q96S90 MIR6515-201ENST00000619843 57 ntBASIC0.47□□□□□ -2.33
LYSMD1Q96S90 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.47□□□□□ -2.33
LYSMD1Q96S90 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.47□□□□□ -2.33
LYSMD1Q96S90 ELL2P3-201ENST00000457883 1602 ntBASIC0.46□□□□□ -2.34
LYSMD1Q96S90 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
LYSMD1Q96S90 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
LYSMD1Q96S90 RNU5E-6P-201ENST00000365574 115 ntBASIC0.46□□□□□ -2.34
LYSMD1Q96S90 SNORA32.2-201ENST00000384049 122 ntBASIC0.46□□□□□ -2.34
LYSMD1Q96S90 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.46□□□□□ -2.34
LYSMD1Q96S90 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.46□□□□□ -2.34
LYSMD1Q96S90 RAB28P5-201ENST00000427490 651 ntBASIC0.46□□□□□ -2.34
LYSMD1Q96S90 AC002429.1-201ENST00000437672 148 ntBASIC0.46□□□□□ -2.34
LYSMD1Q96S90 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.46□□□□□ -2.34
LYSMD1Q96S90 AL157398.1-201ENST00000452981 186 ntBASIC0.46□□□□□ -2.34
LYSMD1Q96S90 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.46□□□□□ -2.34
LYSMD1Q96S90 RNU6-1132P-201ENST00000459214 107 ntBASIC0.46□□□□□ -2.34
LYSMD1Q96S90 RNU7-34P-201ENST00000459394 64 ntBASIC0.46□□□□□ -2.34
LYSMD1Q96S90 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.46□□□□□ -2.34
LYSMD1Q96S90 MTCO3P9-201ENST00000506989 781 ntBASIC0.46□□□□□ -2.34
LYSMD1Q96S90 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.46□□□□□ -2.34
LYSMD1Q96S90 AC067942.3-201ENST00000512025 362 ntBASIC0.46□□□□□ -2.34
LYSMD1Q96S90 SNORA31.2-201ENST00000516019 134 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms