Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 RPL37P4-201ENST00000448908 268 ntBASIC4.12□□□□□ -1.75
SYNGAP1Q96PV0 AP001324.2-201ENST00000461163 319 ntBASIC4.12□□□□□ -1.75
SYNGAP1Q96PV0 RPL21P104-201ENST00000464143 478 ntBASIC4.12□□□□□ -1.75
SYNGAP1Q96PV0 MTND5P41-201ENST00000517498 206 ntBASIC4.12□□□□□ -1.75
SYNGAP1Q96PV0 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.12□□□□□ -1.75
SYNGAP1Q96PV0 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.12□□□□□ -1.75
SYNGAP1Q96PV0 AC005176.2-201ENST00000596933 147 ntBASIC4.12□□□□□ -1.75
SYNGAP1Q96PV0 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC4.12□□□□□ -1.75
SYNGAP1Q96PV0 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
SYNGAP1Q96PV0 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.12□□□□□ -1.75
SYNGAP1Q96PV0 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SYNGAP1Q96PV0 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SYNGAP1Q96PV0 AC008725.1-201ENST00000605123 2263 ntBASIC4.11□□□□□ -1.75
SYNGAP1Q96PV0 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SYNGAP1Q96PV0 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.11□□□□□ -1.75
SYNGAP1Q96PV0 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SYNGAP1Q96PV0 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SYNGAP1Q96PV0 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.11□□□□□ -1.75
SYNGAP1Q96PV0 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SYNGAP1Q96PV0 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.11□□□□□ -1.75
SYNGAP1Q96PV0 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.11□□□□□ -1.75
SYNGAP1Q96PV0 RNU6-281P-201ENST00000384212 103 ntBASIC4.11□□□□□ -1.75
SYNGAP1Q96PV0 SNORA46.1-201ENST00000391069 153 ntBASIC4.11□□□□□ -1.75
SYNGAP1Q96PV0 MTHFD2P2-201ENST00000407725 247 ntBASIC4.11□□□□□ -1.75
SYNGAP1Q96PV0 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.11□□□□□ -1.75
SYNGAP1Q96PV0 AC125238.1-201ENST00000448842 249 ntBASIC4.11□□□□□ -1.75
SYNGAP1Q96PV0 RNU6-703P-201ENST00000516946 107 ntBASIC4.11□□□□□ -1.75
SYNGAP1Q96PV0 AL391261.3-201ENST00000557194 520 ntBASIC4.11□□□□□ -1.75
SYNGAP1Q96PV0 ZNF192P1-203ENST00000565888 810 ntBASIC4.11□□□□□ -1.75
SYNGAP1Q96PV0 AP001485.1-201ENST00000604799 199 ntBASIC4.11□□□□□ -1.75
SYNGAP1Q96PV0 MIR7111-201ENST00000619751 72 ntBASIC4.11□□□□□ -1.75
SYNGAP1Q96PV0 AC244205.2-202ENST00000635781 342 ntBASIC4.11□□□□□ -1.75
SYNGAP1Q96PV0 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.11□□□□□ -1.75
SYNGAP1Q96PV0 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.1□□□□□ -1.75
SYNGAP1Q96PV0 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
SYNGAP1Q96PV0 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SYNGAP1Q96PV0 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
SYNGAP1Q96PV0 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SYNGAP1Q96PV0 RNU6-942P-201ENST00000363002 107 ntBASIC4.1□□□□□ -1.75
SYNGAP1Q96PV0 SNORA80A-201ENST00000363922 136 ntBASIC4.1□□□□□ -1.75
SYNGAP1Q96PV0 Y_RNA.446-201ENST00000384178 104 ntBASIC4.1□□□□□ -1.75
SYNGAP1Q96PV0 Y_RNA.570-201ENST00000384750 101 ntBASIC4.1□□□□□ -1.75
SYNGAP1Q96PV0 RPL23AP36-201ENST00000413895 458 ntBASIC4.1□□□□□ -1.75
SYNGAP1Q96PV0 AC138623.1-201ENST00000418060 216 ntBASIC4.1□□□□□ -1.75
SYNGAP1Q96PV0 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.1□□□□□ -1.75
SYNGAP1Q96PV0 AC010095.1-201ENST00000443543 144 ntBASIC4.1□□□□□ -1.75
SYNGAP1Q96PV0 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC4.1□□□□□ -1.75
SYNGAP1Q96PV0 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC4.1□□□□□ -1.75
SYNGAP1Q96PV0 snoU13.6-201ENST00000458785 104 ntBASIC4.1□□□□□ -1.75
SYNGAP1Q96PV0 RPL26P26-201ENST00000480251 434 ntBASIC4.1□□□□□ -1.75
SYNGAP1Q96PV0 SNORA40.9-201ENST00000515895 93 ntBASIC4.1□□□□□ -1.75
SYNGAP1Q96PV0 SNORA27.4-201ENST00000516650 95 ntBASIC4.1□□□□□ -1.75
SYNGAP1Q96PV0 RNU6-1198P-201ENST00000516904 67 ntBASIC4.1□□□□□ -1.75
SYNGAP1Q96PV0 RNU6-58P-201ENST00000517143 103 ntBASIC4.1□□□□□ -1.75
SYNGAP1Q96PV0 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC4.1□□□□□ -1.75
SYNGAP1Q96PV0 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.1□□□□□ -1.75
SYNGAP1Q96PV0 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.1□□□□□ -1.75
SYNGAP1Q96PV0 MIR3144-201ENST00000579460 79 ntBASIC4.1□□□□□ -1.75
SYNGAP1Q96PV0 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.1□□□□□ -1.75
SYNGAP1Q96PV0 KLKP1-201ENST00000595979 403 ntBASIC4.1□□□□□ -1.75
SYNGAP1Q96PV0 FTX_3.1-201ENST00000610451 147 ntBASIC4.1□□□□□ -1.75
SYNGAP1Q96PV0 AC004825.2-201ENST00000616634 455 ntBASIC4.1□□□□□ -1.75
SYNGAP1Q96PV0 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.1□□□□□ -1.75
SYNGAP1Q96PV0 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.1□□□□□ -1.75
SYNGAP1Q96PV0 U6.106-201ENST00000636360 105 ntBASIC4.1□□□□□ -1.75
SYNGAP1Q96PV0 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SYNGAP1Q96PV0 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
SYNGAP1Q96PV0 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.09□□□□□ -1.75
SYNGAP1Q96PV0 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SYNGAP1Q96PV0 RNU6-600P-201ENST00000362524 99 ntBASIC4.09□□□□□ -1.75
SYNGAP1Q96PV0 RNU6-884P-201ENST00000363889 107 ntBASIC4.09□□□□□ -1.75
SYNGAP1Q96PV0 RNU6-704P-201ENST00000364162 103 ntBASIC4.09□□□□□ -1.75
SYNGAP1Q96PV0 SNORA36A-201ENST00000384221 132 ntBASIC4.09□□□□□ -1.75
SYNGAP1Q96PV0 RNA5SP213-201ENST00000391031 106 ntBASIC4.09□□□□□ -1.75
SYNGAP1Q96PV0 RNU6-159P-201ENST00000391080 106 ntBASIC4.09□□□□□ -1.75
SYNGAP1Q96PV0 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.09□□□□□ -1.75
SYNGAP1Q96PV0 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.09□□□□□ -1.75
SYNGAP1Q96PV0 AC009237.7-201ENST00000447357 229 ntBASIC4.09□□□□□ -1.75
SYNGAP1Q96PV0 AC007395.1-201ENST00000451333 677 ntBASIC4.09□□□□□ -1.75
SYNGAP1Q96PV0 MTATP6P7-201ENST00000453315 681 ntBASIC4.09□□□□□ -1.75
SYNGAP1Q96PV0 SNRPGP5-201ENST00000456003 220 ntBASIC4.09□□□□□ -1.75
SYNGAP1Q96PV0 RNU7-200P-201ENST00000516105 62 ntBASIC4.09□□□□□ -1.75
SYNGAP1Q96PV0 SNORA70.18-201ENST00000516696 98 ntBASIC4.09□□□□□ -1.75
SYNGAP1Q96PV0 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.09□□□□□ -1.75
SYNGAP1Q96PV0 MRPS18CP4-201ENST00000535821 231 ntBASIC4.09□□□□□ -1.75
SYNGAP1Q96PV0 MIR4769-201ENST00000584126 77 ntBASIC4.09□□□□□ -1.75
SYNGAP1Q96PV0 AL590240.4-201ENST00000616908 390 ntBASIC4.09□□□□□ -1.75
SYNGAP1Q96PV0 AC006386.2-201ENST00000624491 75 ntBASIC4.09□□□□□ -1.75
SYNGAP1Q96PV0 AC012005.1-201ENST00000624575 75 ntBASIC4.09□□□□□ -1.75
SYNGAP1Q96PV0 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.09□□□□□ -1.75
SYNGAP1Q96PV0 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
SYNGAP1Q96PV0 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SYNGAP1Q96PV0 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.08□□□□□ -1.76
SYNGAP1Q96PV0 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SYNGAP1Q96PV0 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SYNGAP1Q96PV0 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
SYNGAP1Q96PV0 SNORD32A-201ENST00000364805 84 ntBASIC4.08□□□□□ -1.76
SYNGAP1Q96PV0 RNU6-1280P-201ENST00000365211 107 ntBASIC4.08□□□□□ -1.76
SYNGAP1Q96PV0 Y_RNA.398-201ENST00000383952 99 ntBASIC4.08□□□□□ -1.76
SYNGAP1Q96PV0 RNU1-73P-201ENST00000383971 164 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 168.6 ms