Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.28□□□□□ -2.36
AP1S3Q96PC3 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.27□□□□□ -2.37
AP1S3Q96PC3 RNU1-93P-201ENST00000364704 169 ntBASIC0.27□□□□□ -2.37
AP1S3Q96PC3 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
AP1S3Q96PC3 RNU6-190P-201ENST00000384154 102 ntBASIC0.27□□□□□ -2.37
AP1S3Q96PC3 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.27□□□□□ -2.37
AP1S3Q96PC3 CALM2P2-201ENST00000428512 440 ntBASIC0.27□□□□□ -2.37
AP1S3Q96PC3 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.27□□□□□ -2.37
AP1S3Q96PC3 AC016925.1-201ENST00000458303 298 ntBASIC0.27□□□□□ -2.37
AP1S3Q96PC3 RNU7-34P-201ENST00000459394 64 ntBASIC0.27□□□□□ -2.37
AP1S3Q96PC3 AHI1-208ENST00000488690 712 ntTSL 5 BASIC0.27□□□□□ -2.37
AP1S3Q96PC3 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.27□□□□□ -2.37
AP1S3Q96PC3 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.27□□□□□ -2.37
AP1S3Q96PC3 AC011979.2-201ENST00000527568 352 ntBASIC0.27□□□□□ -2.37
AP1S3Q96PC3 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.27□□□□□ -2.37
AP1S3Q96PC3 MTND3P13-201ENST00000574391 343 ntBASIC0.27□□□□□ -2.37
AP1S3Q96PC3 MIR4714-201ENST00000580728 77 ntBASIC0.27□□□□□ -2.37
AP1S3Q96PC3 AC080078.2-201ENST00000603766 501 ntBASIC0.27□□□□□ -2.37
AP1S3Q96PC3 MIR6715A-201ENST00000615929 79 ntBASIC0.27□□□□□ -2.37
AP1S3Q96PC3 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC0.27□□□□□ -2.37
AP1S3Q96PC3 MIR5087-201ENST00000635826 76 ntBASIC0.27□□□□□ -2.37
AP1S3Q96PC3 RNU6-621P-201ENST00000364752 109 ntBASIC0.26□□□□□ -2.37
AP1S3Q96PC3 RNU6-534P-201ENST00000364877 106 ntBASIC0.26□□□□□ -2.37
AP1S3Q96PC3 SNORD31B-201ENST00000364977 69 ntBASIC0.26□□□□□ -2.37
AP1S3Q96PC3 RNU6-1179P-201ENST00000384667 107 ntBASIC0.26□□□□□ -2.37
AP1S3Q96PC3 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
AP1S3Q96PC3 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.26□□□□□ -2.37
AP1S3Q96PC3 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.26□□□□□ -2.37
AP1S3Q96PC3 USP9YP21-201ENST00000420603 432 ntBASIC0.26□□□□□ -2.37
AP1S3Q96PC3 MTND4P20-201ENST00000424125 869 ntBASIC0.26□□□□□ -2.37
AP1S3Q96PC3 MTCO2P12-201ENST00000427426 682 ntBASIC0.26□□□□□ -2.37
AP1S3Q96PC3 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.26□□□□□ -2.37
AP1S3Q96PC3 AC069257.2-201ENST00000441819 155 ntBASIC0.26□□□□□ -2.37
AP1S3Q96PC3 AL606517.2-201ENST00000442855 241 ntBASIC0.26□□□□□ -2.37
AP1S3Q96PC3 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.26□□□□□ -2.37
AP1S3Q96PC3 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.26□□□□□ -2.37
AP1S3Q96PC3 RNU7-14P-201ENST00000459331 62 ntBASIC0.26□□□□□ -2.37
AP1S3Q96PC3 AL049829.1-201ENST00000465411 156 ntBASIC0.26□□□□□ -2.37
AP1S3Q96PC3 AC027338.1-201ENST00000514840 825 ntBASIC0.26□□□□□ -2.37
AP1S3Q96PC3 RNU6-229P-201ENST00000516614 102 ntBASIC0.26□□□□□ -2.37
AP1S3Q96PC3 RNU6-922P-201ENST00000516753 99 ntBASIC0.26□□□□□ -2.37
AP1S3Q96PC3 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.26□□□□□ -2.37
AP1S3Q96PC3 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.26□□□□□ -2.37
AP1S3Q96PC3 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.26□□□□□ -2.37
AP1S3Q96PC3 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.26□□□□□ -2.37
AP1S3Q96PC3 KC877982.1-201ENST00000602313 470 ntBASIC0.26□□□□□ -2.37
AP1S3Q96PC3 AL929325.1-201ENST00000603096 117 ntBASIC0.26□□□□□ -2.37
AP1S3Q96PC3 AC092574.1-201ENST00000609771 420 ntBASIC0.26□□□□□ -2.37
AP1S3Q96PC3 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC0.26□□□□□ -2.37
AP1S3Q96PC3 AC093913.1-201ENST00000614178 329 ntBASIC0.26□□□□□ -2.37
AP1S3Q96PC3 AC009509.4-201ENST00000619202 509 ntBASIC0.26□□□□□ -2.37
AP1S3Q96PC3 AL138955.1-201ENST00000622881 1040 ntBASIC0.26□□□□□ -2.37
AP1S3Q96PC3 AC005858.4-201ENST00000623191 700 ntBASIC0.26□□□□□ -2.37
AP1S3Q96PC3 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.26□□□□□ -2.37
AP1S3Q96PC3 SNORD98-201ENST00000636377 67 ntBASIC0.26□□□□□ -2.37
AP1S3Q96PC3 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
AP1S3Q96PC3 MIR96-201ENST00000362288 78 ntBASIC0.25□□□□□ -2.37
AP1S3Q96PC3 RNU6-769P-201ENST00000384407 104 ntBASIC0.25□□□□□ -2.37
AP1S3Q96PC3 RPL21P1-201ENST00000399532 476 ntBASIC0.25□□□□□ -2.37
AP1S3Q96PC3 MTCYBP2-201ENST00000407745 171 ntBASIC0.25□□□□□ -2.37
AP1S3Q96PC3 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.25□□□□□ -2.37
AP1S3Q96PC3 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.25□□□□□ -2.37
AP1S3Q96PC3 C1DP2-201ENST00000418167 426 ntBASIC0.25□□□□□ -2.37
AP1S3Q96PC3 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.25□□□□□ -2.37
AP1S3Q96PC3 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.25□□□□□ -2.37
AP1S3Q96PC3 AC010154.1-201ENST00000425857 269 ntBASIC0.25□□□□□ -2.37
AP1S3Q96PC3 RPL23AP30-201ENST00000432419 501 ntBASIC0.25□□□□□ -2.37
AP1S3Q96PC3 AC092628.1-201ENST00000436250 252 ntBASIC0.25□□□□□ -2.37
AP1S3Q96PC3 AC073614.1-201ENST00000438690 650 ntBASIC0.25□□□□□ -2.37
AP1S3Q96PC3 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.25□□□□□ -2.37
AP1S3Q96PC3 AL360271.2-201ENST00000447710 161 ntBASIC0.25□□□□□ -2.37
AP1S3Q96PC3 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.25□□□□□ -2.37
AP1S3Q96PC3 C1DP4-201ENST00000455429 424 ntBASIC0.25□□□□□ -2.37
AP1S3Q96PC3 AC091435.1-201ENST00000505442 584 ntBASIC0.25□□□□□ -2.37
AP1S3Q96PC3 AC011406.1-201ENST00000512440 370 ntBASIC0.25□□□□□ -2.37
AP1S3Q96PC3 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.25□□□□□ -2.37
AP1S3Q96PC3 MTND2P7-201ENST00000521337 640 ntBASIC0.25□□□□□ -2.37
AP1S3Q96PC3 AP002453.2-201ENST00000533503 320 ntBASIC0.25□□□□□ -2.37
AP1S3Q96PC3 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC0.25□□□□□ -2.37
AP1S3Q96PC3 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.25□□□□□ -2.37
AP1S3Q96PC3 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.25□□□□□ -2.37
AP1S3Q96PC3 FAM106DP-201ENST00000586416 501 ntBASIC0.25□□□□□ -2.37
AP1S3Q96PC3 AC174048.1-201ENST00000603389 144 ntBASIC0.25□□□□□ -2.37
AP1S3Q96PC3 AC131235.4-201ENST00000609288 620 ntBASIC0.25□□□□□ -2.37
AP1S3Q96PC3 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.25□□□□□ -2.37
AP1S3Q96PC3 AC068880.4-201ENST00000623082 495 ntBASIC0.25□□□□□ -2.37
AP1S3Q96PC3 MIR338-201ENST00000636369 67 ntBASIC0.25□□□□□ -2.37
AP1S3Q96PC3 OR4G1P-203ENST00000641984 1631 ntBASIC0.24□□□□□ -2.37
AP1S3Q96PC3 MIR337-201ENST00000362281 93 ntBASIC0.24□□□□□ -2.37
AP1S3Q96PC3 RNA5SP499-201ENST00000363982 119 ntBASIC0.24□□□□□ -2.37
AP1S3Q96PC3 RNU6-960P-201ENST00000364056 120 ntBASIC0.24□□□□□ -2.37
AP1S3Q96PC3 RNU6-877P-201ENST00000383868 107 ntBASIC0.24□□□□□ -2.37
AP1S3Q96PC3 RNU6-142P-201ENST00000384019 107 ntBASIC0.24□□□□□ -2.37
AP1S3Q96PC3 RNU6-418P-201ENST00000384035 107 ntBASIC0.24□□□□□ -2.37
AP1S3Q96PC3 SNORA12.1-201ENST00000390873 148 ntBASIC0.24□□□□□ -2.37
AP1S3Q96PC3 RNA5SP109-201ENST00000391010 116 ntBASIC0.24□□□□□ -2.37
AP1S3Q96PC3 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC0.24□□□□□ -2.37
AP1S3Q96PC3 RNA5SP201-201ENST00000410316 124 ntBASIC0.24□□□□□ -2.37
AP1S3Q96PC3 ELOCP17-201ENST00000414751 326 ntBASIC0.24□□□□□ -2.37
AP1S3Q96PC3 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms