Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 RNU7-21P-201ENST00000459430 62 ntBASIC-0.66□□□□□ -2.51
CFAP54Q96N23 AC009032.1-201ENST00000617574 431 ntBASIC-0.66□□□□□ -2.51
CFAP54Q96N23 AC091912.2-201ENST00000624798 167 ntBASIC-0.66□□□□□ -2.51
CFAP54Q96N23 RNU1-39P-201ENST00000383897 165 ntBASIC-0.66□□□□□ -2.51
CFAP54Q96N23 Y_RNA.480-201ENST00000384364 102 ntBASIC-0.66□□□□□ -2.51
CFAP54Q96N23 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC-0.66□□□□□ -2.51
CFAP54Q96N23 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC-0.66□□□□□ -2.51
CFAP54Q96N23 RAC1P7-201ENST00000445367 377 ntBASIC-0.66□□□□□ -2.51
CFAP54Q96N23 AC002381.1-201ENST00000447049 280 ntBASIC-0.66□□□□□ -2.51
CFAP54Q96N23 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.66□□□□□ -2.51
CFAP54Q96N23 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC-0.66□□□□□ -2.51
CFAP54Q96N23 SNORA27.4-201ENST00000516650 95 ntBASIC-0.66□□□□□ -2.51
CFAP54Q96N23 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.66□□□□□ -2.51
CFAP54Q96N23 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC-0.66□□□□□ -2.51
CFAP54Q96N23 RMST_7.1-201ENST00000621935 268 ntBASIC-0.66□□□□□ -2.51
CFAP54Q96N23 PLD1-217ENST00000627725 174 ntTSL 5 BASIC-0.66□□□□□ -2.51
CFAP54Q96N23 RNU6-1280P-201ENST00000365211 107 ntBASIC-0.66□□□□□ -2.52
CFAP54Q96N23 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-0.66□□□□□ -2.52
CFAP54Q96N23 RPL23AP50-201ENST00000434149 455 ntBASIC-0.66□□□□□ -2.52
CFAP54Q96N23 AC097372.4-201ENST00000625025 466 ntBASIC-0.66□□□□□ -2.52
CFAP54Q96N23 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC-0.67□□□□□ -2.52
CFAP54Q96N23 Y_RNA.53-201ENST00000362765 102 ntBASIC-0.67□□□□□ -2.52
CFAP54Q96N23 U8.5-201ENST00000364528 136 ntBASIC-0.67□□□□□ -2.52
CFAP54Q96N23 MTATP6P31-201ENST00000406985 692 ntBASIC-0.67□□□□□ -2.52
CFAP54Q96N23 HMGN2P26-201ENST00000463169 339 ntBASIC-0.67□□□□□ -2.52
CFAP54Q96N23 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.67□□□□□ -2.52
CFAP54Q96N23 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC-0.67□□□□□ -2.52
CFAP54Q96N23 AC130324.3-201ENST00000614165 542 ntBASIC-0.67□□□□□ -2.52
CFAP54Q96N23 CASC19-280ENST00000642102 1351 ntBASIC-0.67□□□□□ -2.52
CFAP54Q96N23 SNORA75.6-201ENST00000391318 127 ntBASIC-0.67□□□□□ -2.52
CFAP54Q96N23 RPL22P22-201ENST00000395439 379 ntBASIC-0.67□□□□□ -2.52
CFAP54Q96N23 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC-0.67□□□□□ -2.52
CFAP54Q96N23 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC-0.67□□□□□ -2.52
CFAP54Q96N23 AL953862.1-201ENST00000423016 168 ntBASIC-0.67□□□□□ -2.52
CFAP54Q96N23 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC-0.67□□□□□ -2.52
CFAP54Q96N23 MIR6828-201ENST00000636181 60 ntBASIC-0.67□□□□□ -2.52
CFAP54Q96N23 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.68□□□□□ -2.52
CFAP54Q96N23 RNA5SP268-201ENST00000516828 124 ntBASIC-0.68□□□□□ -2.52
CFAP54Q96N23 ARL2BPP5-201ENST00000523141 481 ntBASIC-0.68□□□□□ -2.52
CFAP54Q96N23 AC023050.3-201ENST00000541142 333 ntBASIC-0.68□□□□□ -2.52
CFAP54Q96N23 LINC02555-201ENST00000563933 1951 ntBASIC-0.68□□□□□ -2.52
CFAP54Q96N23 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.68□□□□□ -2.52
CFAP54Q96N23 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.68□□□□□ -2.52
CFAP54Q96N23 AC111000.5-201ENST00000506559 1178 ntBASIC-0.68□□□□□ -2.52
CFAP54Q96N23 RNA5SP216-201ENST00000516111 123 ntBASIC-0.68□□□□□ -2.52
CFAP54Q96N23 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC-0.68□□□□□ -2.52
CFAP54Q96N23 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC-0.68□□□□□ -2.52
CFAP54Q96N23 AC079791.1-201ENST00000605356 973 ntBASIC-0.68□□□□□ -2.52
CFAP54Q96N23 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.68□□□□□ -2.52
CFAP54Q96N23 RNU2-21P-201ENST00000410368 188 ntBASIC-0.68□□□□□ -2.52
CFAP54Q96N23 MTND4P11-201ENST00000417020 1058 ntBASIC-0.68□□□□□ -2.52
CFAP54Q96N23 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC-0.68□□□□□ -2.52
CFAP54Q96N23 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC-0.68□□□□□ -2.52
CFAP54Q96N23 RNU6-880P-201ENST00000384526 107 ntBASIC-0.69□□□□□ -2.52
CFAP54Q96N23 TAF9BP2-201ENST00000400856 499 ntBASIC-0.69□□□□□ -2.52
CFAP54Q96N23 MIR548H2-201ENST00000408874 88 ntBASIC-0.69□□□□□ -2.52
CFAP54Q96N23 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC-0.69□□□□□ -2.52
CFAP54Q96N23 CECR9-201ENST00000453421 199 ntBASIC-0.69□□□□□ -2.52
CFAP54Q96N23 AC091959.1-201ENST00000495857 238 ntBASIC-0.69□□□□□ -2.52
CFAP54Q96N23 RNU6-983P-201ENST00000516004 103 ntBASIC-0.69□□□□□ -2.52
CFAP54Q96N23 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.69□□□□□ -2.52
CFAP54Q96N23 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC-0.69□□□□□ -2.52
CFAP54Q96N23 AC007490.1-201ENST00000624321 703 ntBASIC-0.69□□□□□ -2.52
CFAP54Q96N23 AC119674.1-220ENST00000641502 1048 ntBASIC-0.69□□□□□ -2.52
CFAP54Q96N23 AL136310.1-201ENST00000404926 654 ntBASIC-0.69□□□□□ -2.52
CFAP54Q96N23 MLLT10P1-201ENST00000418346 262 ntBASIC-0.69□□□□□ -2.52
CFAP54Q96N23 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC-0.69□□□□□ -2.52
CFAP54Q96N23 snoU13.7-201ENST00000459220 104 ntBASIC-0.69□□□□□ -2.52
CFAP54Q96N23 RNU6-706P-201ENST00000517229 104 ntBASIC-0.69□□□□□ -2.52
CFAP54Q96N23 AC022616.3-201ENST00000523940 148 ntBASIC-0.69□□□□□ -2.52
CFAP54Q96N23 AL357080.1-201ENST00000617394 239 ntBASIC-0.69□□□□□ -2.52
CFAP54Q96N23 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.7□□□□□ -2.52
CFAP54Q96N23 MIR1262-201ENST00000408276 93 ntBASIC-0.7□□□□□ -2.52
CFAP54Q96N23 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC-0.7□□□□□ -2.52
CFAP54Q96N23 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.7□□□□□ -2.52
CFAP54Q96N23 MTCO2P18-201ENST00000457151 658 ntBASIC-0.7□□□□□ -2.52
CFAP54Q96N23 AC007215.1-201ENST00000464893 276 ntBASIC-0.7□□□□□ -2.52
CFAP54Q96N23 AC112220.2-201ENST00000605513 533 ntBASIC-0.7□□□□□ -2.52
CFAP54Q96N23 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.7□□□□□ -2.52
CFAP54Q96N23 AL079342.2-201ENST00000403367 482 ntBASIC-0.7□□□□□ -2.52
CFAP54Q96N23 RNU2-59P-201ENST00000410482 191 ntBASIC-0.7□□□□□ -2.52
CFAP54Q96N23 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.7□□□□□ -2.52
CFAP54Q96N23 AC006210.1-201ENST00000424882 111 ntBASIC-0.7□□□□□ -2.52
CFAP54Q96N23 MTND2P21-201ENST00000436242 1042 ntBASIC-0.7□□□□□ -2.52
CFAP54Q96N23 AL049714.1-201ENST00000466686 347 ntBASIC-0.7□□□□□ -2.52
CFAP54Q96N23 AC104982.1-201ENST00000478775 574 ntBASIC-0.7□□□□□ -2.52
CFAP54Q96N23 SNORA70.16-201ENST00000516390 95 ntBASIC-0.7□□□□□ -2.52
CFAP54Q96N23 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-0.7□□□□□ -2.52
CFAP54Q96N23 RNU6-611P-201ENST00000384276 104 ntBASIC-0.7□□□□□ -2.52
CFAP54Q96N23 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC-0.7□□□□□ -2.52
CFAP54Q96N23 AC002429.1-201ENST00000437672 148 ntBASIC-0.7□□□□□ -2.52
CFAP54Q96N23 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC-0.7□□□□□ -2.52
CFAP54Q96N23 ELOCP24-201ENST00000456370 334 ntBASIC-0.7□□□□□ -2.52
CFAP54Q96N23 RNU6-897P-201ENST00000517135 105 ntBASIC-0.7□□□□□ -2.52
CFAP54Q96N23 ZNF519P3-201ENST00000557158 1032 ntBASIC-0.7□□□□□ -2.52
CFAP54Q96N23 HMGB1P33-201ENST00000563485 527 ntBASIC-0.7□□□□□ -2.52
CFAP54Q96N23 AL031281.1-201ENST00000604049 488 ntBASIC-0.7□□□□□ -2.52
CFAP54Q96N23 RNU6-898P-201ENST00000365627 104 ntBASIC-0.71□□□□□ -2.52
CFAP54Q96N23 USP9YP29-201ENST00000445112 563 ntBASIC-0.71□□□□□ -2.52
CFAP54Q96N23 AC106038.2-201ENST00000520706 568 ntBASIC-0.71□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms