Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 RNU4-47P-201ENST00000410876 114 ntBASIC3.39□□□□□ -1.87
CHFRQ96EP1 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.39□□□□□ -1.87
CHFRQ96EP1 AL031659.1-201ENST00000447075 539 ntBASIC3.39□□□□□ -1.87
CHFRQ96EP1 AC079354.2-201ENST00000453523 154 ntBASIC3.39□□□□□ -1.87
CHFRQ96EP1 RNU6-953P-201ENST00000459154 107 ntBASIC3.39□□□□□ -1.87
CHFRQ96EP1 RNU6-1037P-201ENST00000459571 107 ntBASIC3.39□□□□□ -1.87
CHFRQ96EP1 AP002884.2-201ENST00000471647 395 ntBASIC3.39□□□□□ -1.87
CHFRQ96EP1 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.39□□□□□ -1.87
CHFRQ96EP1 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.39□□□□□ -1.87
CHFRQ96EP1 RNU6-62P-201ENST00000516526 102 ntBASIC3.39□□□□□ -1.87
CHFRQ96EP1 RNU6-1012P-201ENST00000516606 109 ntBASIC3.39□□□□□ -1.87
CHFRQ96EP1 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.39□□□□□ -1.87
CHFRQ96EP1 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.39□□□□□ -1.87
CHFRQ96EP1 AP002826.1-201ENST00000608835 315 ntBASIC3.39□□□□□ -1.87
CHFRQ96EP1 AC009318.2-201ENST00000610917 651 ntBASIC3.39□□□□□ -1.87
CHFRQ96EP1 AL365222.1-201ENST00000614661 98 ntBASIC3.39□□□□□ -1.87
CHFRQ96EP1 MIR6130-201ENST00000619419 109 ntBASIC3.39□□□□□ -1.87
CHFRQ96EP1 AC006386.2-201ENST00000624491 75 ntBASIC3.39□□□□□ -1.87
CHFRQ96EP1 AC012005.1-201ENST00000624575 75 ntBASIC3.39□□□□□ -1.87
CHFRQ96EP1 MIR7153-201ENST00000637758 57 ntBASIC3.39□□□□□ -1.87
CHFRQ96EP1 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CHFRQ96EP1 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.39□□□□□ -1.87
CHFRQ96EP1 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CHFRQ96EP1 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CHFRQ96EP1 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CHFRQ96EP1 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CHFRQ96EP1 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CHFRQ96EP1 SNORA80A-201ENST00000363922 136 ntBASIC3.38□□□□□ -1.87
CHFRQ96EP1 SNORA14A-201ENST00000364773 135 ntBASIC3.38□□□□□ -1.87
CHFRQ96EP1 CD24P4-201ENST00000382840 243 ntBASIC3.38□□□□□ -1.87
CHFRQ96EP1 SNORD20-201ENST00000384550 80 ntBASIC3.38□□□□□ -1.87
CHFRQ96EP1 RPL19P1-201ENST00000411635 428 ntBASIC3.38□□□□□ -1.87
CHFRQ96EP1 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.38□□□□□ -1.87
CHFRQ96EP1 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.38□□□□□ -1.87
CHFRQ96EP1 RPS4XP2-201ENST00000458402 793 ntBASIC3.38□□□□□ -1.87
CHFRQ96EP1 RPL27AP5-201ENST00000469428 449 ntBASIC3.38□□□□□ -1.87
CHFRQ96EP1 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.38□□□□□ -1.87
CHFRQ96EP1 SUMO2P6-201ENST00000505273 288 ntBASIC3.38□□□□□ -1.87
CHFRQ96EP1 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.38□□□□□ -1.87
CHFRQ96EP1 HIGD1AP1-201ENST00000550979 275 ntBASIC3.38□□□□□ -1.87
CHFRQ96EP1 MIR4282-201ENST00000583613 67 ntBASIC3.38□□□□□ -1.87
CHFRQ96EP1 MIR4298-201ENST00000584380 73 ntBASIC3.38□□□□□ -1.87
CHFRQ96EP1 MIR548AC-201ENST00000585049 88 ntBASIC3.38□□□□□ -1.87
CHFRQ96EP1 Y_RNA.772-201ENST00000606692 102 ntBASIC3.38□□□□□ -1.87
CHFRQ96EP1 AL450472.3-201ENST00000615578 367 ntBASIC3.38□□□□□ -1.87
CHFRQ96EP1 AC011476.5-201ENST00000615594 130 ntBASIC3.38□□□□□ -1.87
CHFRQ96EP1 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
CHFRQ96EP1 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CHFRQ96EP1 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
CHFRQ96EP1 AL365361.1-201ENST00000566942 3481 ntBASIC3.37□□□□□ -1.87
CHFRQ96EP1 Y_RNA.286-201ENST00000364813 102 ntBASIC3.37□□□□□ -1.87
CHFRQ96EP1 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CHFRQ96EP1 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.37□□□□□ -1.87
CHFRQ96EP1 Y_RNA.504-201ENST00000384481 104 ntBASIC3.37□□□□□ -1.87
CHFRQ96EP1 SNORA44-201ENST00000384584 132 ntBASIC3.37□□□□□ -1.87
CHFRQ96EP1 SNORA12.2-201ENST00000391040 156 ntBASIC3.37□□□□□ -1.87
CHFRQ96EP1 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CHFRQ96EP1 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CHFRQ96EP1 AL357552.1-201ENST00000445254 415 ntBASIC3.37□□□□□ -1.87
CHFRQ96EP1 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.37□□□□□ -1.87
CHFRQ96EP1 AC006539.3-201ENST00000454258 129 ntBASIC3.37□□□□□ -1.87
CHFRQ96EP1 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CHFRQ96EP1 RNU6-1219P-201ENST00000516143 112 ntBASIC3.37□□□□□ -1.87
CHFRQ96EP1 RNU6-1095P-201ENST00000516148 108 ntBASIC3.37□□□□□ -1.87
CHFRQ96EP1 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.37□□□□□ -1.87
CHFRQ96EP1 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.37□□□□□ -1.87
CHFRQ96EP1 AL590705.4-201ENST00000532209 134 ntBASIC3.37□□□□□ -1.87
CHFRQ96EP1 AL162424.1-201ENST00000602325 221 ntBASIC3.37□□□□□ -1.87
CHFRQ96EP1 AC009314.1-201ENST00000603871 304 ntBASIC3.37□□□□□ -1.87
CHFRQ96EP1 MIR8076-201ENST00000611401 83 ntBASIC3.37□□□□□ -1.87
CHFRQ96EP1 RMST_4.1-201ENST00000616886 107 ntBASIC3.37□□□□□ -1.87
CHFRQ96EP1 MIR4275-201ENST00000636486 87 ntBASIC3.37□□□□□ -1.87
CHFRQ96EP1 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
CHFRQ96EP1 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.37□□□□□ -1.87
CHFRQ96EP1 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CHFRQ96EP1 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CHFRQ96EP1 FAM35CP-201ENST00000554755 2470 ntBASIC3.36□□□□□ -1.87
CHFRQ96EP1 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CHFRQ96EP1 AL513302.2-201ENST00000562313 1842 ntBASIC3.36□□□□□ -1.87
CHFRQ96EP1 MIR422A-201ENST00000362286 90 ntBASIC3.36□□□□□ -1.87
CHFRQ96EP1 RNU4-90P-201ENST00000362773 141 ntBASIC3.36□□□□□ -1.87
CHFRQ96EP1 U3.6-201ENST00000363622 211 ntBASIC3.36□□□□□ -1.87
CHFRQ96EP1 RNA5SP139-201ENST00000364340 117 ntBASIC3.36□□□□□ -1.87
CHFRQ96EP1 RNU6-1130P-201ENST00000365434 107 ntBASIC3.36□□□□□ -1.87
CHFRQ96EP1 Y_RNA.405-201ENST00000383979 100 ntBASIC3.36□□□□□ -1.87
CHFRQ96EP1 Y_RNA.451-201ENST00000384200 100 ntBASIC3.36□□□□□ -1.87
CHFRQ96EP1 Y_RNA.524-201ENST00000384564 100 ntBASIC3.36□□□□□ -1.87
CHFRQ96EP1 Y_RNA.561-201ENST00000384694 100 ntBASIC3.36□□□□□ -1.87
CHFRQ96EP1 MIR493-201ENST00000385254 89 ntBASIC3.36□□□□□ -1.87
CHFRQ96EP1 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CHFRQ96EP1 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CHFRQ96EP1 RNU6-131P-201ENST00000391144 107 ntBASIC3.36□□□□□ -1.87
CHFRQ96EP1 AC090774.1-201ENST00000435925 246 ntBASIC3.36□□□□□ -1.87
CHFRQ96EP1 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CHFRQ96EP1 AC022493.1-201ENST00000492984 337 ntBASIC3.36□□□□□ -1.87
CHFRQ96EP1 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.36□□□□□ -1.87
CHFRQ96EP1 RNY3P16-201ENST00000516338 101 ntBASIC3.36□□□□□ -1.87
CHFRQ96EP1 RN7SKP282-201ENST00000516824 299 ntBASIC3.36□□□□□ -1.87
CHFRQ96EP1 TGIF1P1-201ENST00000558095 802 ntBASIC3.36□□□□□ -1.87
CHFRQ96EP1 LARP7P3-201ENST00000579888 337 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms