Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 FO393415.2-201ENST00000480085 343 ntBASIC3.31□□□□□ -1.88
CHMP4CQ96CF2 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.31□□□□□ -1.88
CHMP4CQ96CF2 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.31□□□□□ -1.88
CHMP4CQ96CF2 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.31□□□□□ -1.88
CHMP4CQ96CF2 RNU2-53P-201ENST00000516257 147 ntBASIC3.31□□□□□ -1.88
CHMP4CQ96CF2 Y_RNA.718-201ENST00000517110 102 ntBASIC3.31□□□□□ -1.88
CHMP4CQ96CF2 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.31□□□□□ -1.88
CHMP4CQ96CF2 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CHMP4CQ96CF2 AP000889.1-201ENST00000530968 660 ntBASIC3.31□□□□□ -1.88
CHMP4CQ96CF2 AC005899.2-201ENST00000584353 90 ntBASIC3.31□□□□□ -1.88
CHMP4CQ96CF2 AC084781.2-201ENST00000615568 161 ntBASIC3.31□□□□□ -1.88
CHMP4CQ96CF2 HMGB1P24-202ENST00000615653 685 ntBASIC3.31□□□□□ -1.88
CHMP4CQ96CF2 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.31□□□□□ -1.88
CHMP4CQ96CF2 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CHMP4CQ96CF2 AC080128.1-201ENST00000474389 1917 ntBASIC3.31□□□□□ -1.88
CHMP4CQ96CF2 AC092593.1-201ENST00000515413 1815 ntBASIC3.3□□□□□ -1.88
CHMP4CQ96CF2 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CHMP4CQ96CF2 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CHMP4CQ96CF2 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CHMP4CQ96CF2 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.3□□□□□ -1.88
CHMP4CQ96CF2 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CHMP4CQ96CF2 RNU6-1285P-201ENST00000363480 105 ntBASIC3.3□□□□□ -1.88
CHMP4CQ96CF2 RNU4-56P-201ENST00000364700 142 ntBASIC3.3□□□□□ -1.88
CHMP4CQ96CF2 RNU6-968P-201ENST00000384076 107 ntBASIC3.3□□□□□ -1.88
CHMP4CQ96CF2 RPL30P4-201ENST00000429309 333 ntBASIC3.3□□□□□ -1.88
CHMP4CQ96CF2 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.3□□□□□ -1.88
CHMP4CQ96CF2 snoU13.14-201ENST00000459372 104 ntBASIC3.3□□□□□ -1.88
CHMP4CQ96CF2 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.3□□□□□ -1.88
CHMP4CQ96CF2 AIG1P1-201ENST00000503376 148 ntBASIC3.3□□□□□ -1.88
CHMP4CQ96CF2 AC023141.11-201ENST00000508864 202 ntBASIC3.3□□□□□ -1.88
CHMP4CQ96CF2 RNU6-56P-201ENST00000516986 93 ntBASIC3.3□□□□□ -1.88
CHMP4CQ96CF2 AC026241.1-201ENST00000517873 2142 ntBASIC3.3□□□□□ -1.88
CHMP4CQ96CF2 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.3□□□□□ -1.88
CHMP4CQ96CF2 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.3□□□□□ -1.88
CHMP4CQ96CF2 ZNF861P-201ENST00000588126 639 ntBASIC3.3□□□□□ -1.88
CHMP4CQ96CF2 AL670379.2-201ENST00000604983 252 ntBASIC3.3□□□□□ -1.88
CHMP4CQ96CF2 AC107871.2-201ENST00000612894 502 ntBASIC3.3□□□□□ -1.88
CHMP4CQ96CF2 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CHMP4CQ96CF2 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.3□□□□□ -1.88
CHMP4CQ96CF2 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.3□□□□□ -1.88
CHMP4CQ96CF2 Y_RNA.40-201ENST00000362645 93 ntBASIC3.29□□□□□ -1.88
CHMP4CQ96CF2 Y_RNA.404-201ENST00000383978 102 ntBASIC3.29□□□□□ -1.88
CHMP4CQ96CF2 Y_RNA.431-201ENST00000384086 102 ntBASIC3.29□□□□□ -1.88
CHMP4CQ96CF2 AL590135.1-201ENST00000422215 156 ntBASIC3.29□□□□□ -1.88
CHMP4CQ96CF2 AC019205.3-201ENST00000424573 156 ntBASIC3.29□□□□□ -1.88
CHMP4CQ96CF2 EIF4EP4-201ENST00000424916 578 ntBASIC3.29□□□□□ -1.88
CHMP4CQ96CF2 AC016700.2-201ENST00000446011 156 ntBASIC3.29□□□□□ -1.88
CHMP4CQ96CF2 GSTA11P-201ENST00000452866 669 ntBASIC3.29□□□□□ -1.88
CHMP4CQ96CF2 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.29□□□□□ -1.88
CHMP4CQ96CF2 AC073901.1-201ENST00000462471 408 ntBASIC3.29□□□□□ -1.88
CHMP4CQ96CF2 RPL23AP70-201ENST00000483361 460 ntBASIC3.29□□□□□ -1.88
CHMP4CQ96CF2 RPL30P1-201ENST00000488676 339 ntBASIC3.29□□□□□ -1.88
CHMP4CQ96CF2 AC140059.1-201ENST00000489238 361 ntBASIC3.29□□□□□ -1.88
CHMP4CQ96CF2 AC015911.1-201ENST00000495111 156 ntBASIC3.29□□□□□ -1.88
CHMP4CQ96CF2 AC021231.3-201ENST00000558497 370 ntBASIC3.29□□□□□ -1.88
CHMP4CQ96CF2 AC105245.1-201ENST00000581934 244 ntBASIC3.29□□□□□ -1.88
CHMP4CQ96CF2 MIR3136-201ENST00000583498 78 ntBASIC3.29□□□□□ -1.88
CHMP4CQ96CF2 AC069294.1-201ENST00000608397 350 ntBASIC3.29□□□□□ -1.88
CHMP4CQ96CF2 AC009318.2-201ENST00000610917 651 ntBASIC3.29□□□□□ -1.88
CHMP4CQ96CF2 SNORD98-201ENST00000636377 67 ntBASIC3.29□□□□□ -1.88
CHMP4CQ96CF2 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CHMP4CQ96CF2 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.29□□□□□ -1.88
CHMP4CQ96CF2 AC233981.2-201ENST00000611524 1614 ntBASIC3.29□□□□□ -1.88
CHMP4CQ96CF2 Y_RNA.11-201ENST00000362375 109 ntBASIC3.28□□□□□ -1.88
CHMP4CQ96CF2 SNORD50.1-201ENST00000362987 71 ntBASIC3.28□□□□□ -1.88
CHMP4CQ96CF2 SNORD116-29-201ENST00000384516 83 ntBASIC3.28□□□□□ -1.88
CHMP4CQ96CF2 RNU6-310P-201ENST00000384655 107 ntBASIC3.28□□□□□ -1.88
CHMP4CQ96CF2 AL590004.2-201ENST00000404787 371 ntBASIC3.28□□□□□ -1.88
CHMP4CQ96CF2 Y_RNA.646-201ENST00000410980 101 ntBASIC3.28□□□□□ -1.88
CHMP4CQ96CF2 MTND4P28-201ENST00000426217 387 ntBASIC3.28□□□□□ -1.88
CHMP4CQ96CF2 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.28□□□□□ -1.88
CHMP4CQ96CF2 Z96811.1-201ENST00000445880 108 ntBASIC3.28□□□□□ -1.88
CHMP4CQ96CF2 AL353705.4-201ENST00000449661 238 ntBASIC3.28□□□□□ -1.88
CHMP4CQ96CF2 AL513124.1-201ENST00000450410 614 ntBASIC3.28□□□□□ -1.88
CHMP4CQ96CF2 AL121594.1-201ENST00000475906 575 ntBASIC3.28□□□□□ -1.88
CHMP4CQ96CF2 AC022447.4-201ENST00000504053 364 ntBASIC3.28□□□□□ -1.88
CHMP4CQ96CF2 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.28□□□□□ -1.88
CHMP4CQ96CF2 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.28□□□□□ -1.88
CHMP4CQ96CF2 AC016256.1-201ENST00000547971 354 ntBASIC3.28□□□□□ -1.88
CHMP4CQ96CF2 AC006023.1-201ENST00000603944 259 ntBASIC3.28□□□□□ -1.88
CHMP4CQ96CF2 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CHMP4CQ96CF2 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.27□□□□□ -1.89
CHMP4CQ96CF2 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.27□□□□□ -1.89
CHMP4CQ96CF2 MTND4P27-201ENST00000450813 1354 ntBASIC3.27□□□□□ -1.89
CHMP4CQ96CF2 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.27□□□□□ -1.89
CHMP4CQ96CF2 RNU6-461P-201ENST00000364195 107 ntBASIC3.27□□□□□ -1.89
CHMP4CQ96CF2 RNU6-1286P-201ENST00000383871 107 ntBASIC3.27□□□□□ -1.89
CHMP4CQ96CF2 Y_RNA.460-201ENST00000384255 102 ntBASIC3.27□□□□□ -1.89
CHMP4CQ96CF2 Y_RNA.535-201ENST00000384612 99 ntBASIC3.27□□□□□ -1.89
CHMP4CQ96CF2 RPL21P75-201ENST00000396599 483 ntBASIC3.27□□□□□ -1.89
CHMP4CQ96CF2 RPL21P28-201ENST00000401418 483 ntBASIC3.27□□□□□ -1.89
CHMP4CQ96CF2 U6atac.2-201ENST00000408644 118 ntBASIC3.27□□□□□ -1.89
CHMP4CQ96CF2 AC008267.5-201ENST00000424928 265 ntBASIC3.27□□□□□ -1.89
CHMP4CQ96CF2 SNORD109B-201ENST00000458961 67 ntBASIC3.27□□□□□ -1.89
CHMP4CQ96CF2 SNORD109A-201ENST00000459128 67 ntBASIC3.27□□□□□ -1.89
CHMP4CQ96CF2 RPL21P39-201ENST00000463605 483 ntBASIC3.27□□□□□ -1.89
CHMP4CQ96CF2 AC090525.1-201ENST00000479116 478 ntBASIC3.27□□□□□ -1.89
CHMP4CQ96CF2 AC087190.1-201ENST00000484462 480 ntBASIC3.27□□□□□ -1.89
CHMP4CQ96CF2 AC093591.1-201ENST00000491435 481 ntBASIC3.27□□□□□ -1.89
CHMP4CQ96CF2 RPL21P16-201ENST00000495531 483 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms