Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 RPL23AP75-201ENST00000491601 451 ntBASIC3□□□□□ -1.93
ATG4AQ8WYN0 AC040926.1-201ENST00000530195 238 ntBASIC3□□□□□ -1.93
ATG4AQ8WYN0 HSPE1P4-201ENST00000550617 308 ntBASIC3□□□□□ -1.93
ATG4AQ8WYN0 AC010928.2-201ENST00000588017 287 ntBASIC3□□□□□ -1.93
ATG4AQ8WYN0 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3□□□□□ -1.93
ATG4AQ8WYN0 AC124312.5-201ENST00000604451 268 ntBASIC3□□□□□ -1.93
ATG4AQ8WYN0 AC107871.2-201ENST00000612894 502 ntBASIC3□□□□□ -1.93
ATG4AQ8WYN0 7SK.10-201ENST00000621414 298 ntBASIC3□□□□□ -1.93
ATG4AQ8WYN0 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3□□□□□ -1.93
ATG4AQ8WYN0 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3□□□□□ -1.93
ATG4AQ8WYN0 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3□□□□□ -1.93
ATG4AQ8WYN0 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3□□□□□ -1.93
ATG4AQ8WYN0 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
ATG4AQ8WYN0 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
ATG4AQ8WYN0 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
ATG4AQ8WYN0 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.99□□□□□ -1.93
ATG4AQ8WYN0 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
ATG4AQ8WYN0 Y_RNA.526-201ENST00000384572 110 ntBASIC2.99□□□□□ -1.93
ATG4AQ8WYN0 MIR628-201ENST00000385229 95 ntBASIC2.99□□□□□ -1.93
ATG4AQ8WYN0 DPH3P2-201ENST00000422618 250 ntBASIC2.99□□□□□ -1.93
ATG4AQ8WYN0 MTCYBP9-201ENST00000431021 303 ntBASIC2.99□□□□□ -1.93
ATG4AQ8WYN0 AC009296.1-201ENST00000443146 155 ntBASIC2.99□□□□□ -1.93
ATG4AQ8WYN0 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.99□□□□□ -1.93
ATG4AQ8WYN0 OR2AQ1P-201ENST00000451972 200 ntBASIC2.99□□□□□ -1.93
ATG4AQ8WYN0 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.99□□□□□ -1.93
ATG4AQ8WYN0 SNRPGP7-201ENST00000469016 106 ntBASIC2.99□□□□□ -1.93
ATG4AQ8WYN0 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.99□□□□□ -1.93
ATG4AQ8WYN0 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.99□□□□□ -1.93
ATG4AQ8WYN0 AC016632.1-201ENST00000503994 196 ntBASIC2.99□□□□□ -1.93
ATG4AQ8WYN0 MTCO2P24-201ENST00000515611 426 ntBASIC2.99□□□□□ -1.93
ATG4AQ8WYN0 RNA5SP76-201ENST00000516277 87 ntBASIC2.99□□□□□ -1.93
ATG4AQ8WYN0 RNU5B-3P-201ENST00000516601 115 ntBASIC2.99□□□□□ -1.93
ATG4AQ8WYN0 SNORA70.24-201ENST00000517233 118 ntBASIC2.99□□□□□ -1.93
ATG4AQ8WYN0 RNU6-711P-201ENST00000517255 106 ntBASIC2.99□□□□□ -1.93
ATG4AQ8WYN0 AC008269.2-201ENST00000561915 1105 ntBASIC2.99□□□□□ -1.93
ATG4AQ8WYN0 AC025281.1-201ENST00000567026 265 ntBASIC2.99□□□□□ -1.93
ATG4AQ8WYN0 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.99□□□□□ -1.93
ATG4AQ8WYN0 AL355297.3-201ENST00000604082 446 ntBASIC2.99□□□□□ -1.93
ATG4AQ8WYN0 AC091953.5-201ENST00000622919 233 ntBASIC2.99□□□□□ -1.93
ATG4AQ8WYN0 AC243829.7-201ENST00000633081 225 ntBASIC2.99□□□□□ -1.93
ATG4AQ8WYN0 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
ATG4AQ8WYN0 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
ATG4AQ8WYN0 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.99□□□□□ -1.93
ATG4AQ8WYN0 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
ATG4AQ8WYN0 AC073346.2-201ENST00000624724 2058 ntBASIC2.98□□□□□ -1.93
ATG4AQ8WYN0 Y_RNA.149-201ENST00000363558 117 ntBASIC2.98□□□□□ -1.93
ATG4AQ8WYN0 SNORD115-32-201ENST00000364079 82 ntBASIC2.98□□□□□ -1.93
ATG4AQ8WYN0 SNORA14A-201ENST00000364773 135 ntBASIC2.98□□□□□ -1.93
ATG4AQ8WYN0 SNORA29-201ENST00000384183 140 ntBASIC2.98□□□□□ -1.93
ATG4AQ8WYN0 RNU6-196P-201ENST00000384315 107 ntBASIC2.98□□□□□ -1.93
ATG4AQ8WYN0 Y_RNA.504-201ENST00000384481 104 ntBASIC2.98□□□□□ -1.93
ATG4AQ8WYN0 MIR512-1-201ENST00000384913 84 ntBASIC2.98□□□□□ -1.93
ATG4AQ8WYN0 MIR1252-201ENST00000408861 65 ntBASIC2.98□□□□□ -1.93
ATG4AQ8WYN0 MTCO3P19-201ENST00000415864 321 ntBASIC2.98□□□□□ -1.93
ATG4AQ8WYN0 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.98□□□□□ -1.93
ATG4AQ8WYN0 RPL39P29-201ENST00000447779 157 ntBASIC2.98□□□□□ -1.93
ATG4AQ8WYN0 AL441985.1-201ENST00000457727 251 ntBASIC2.98□□□□□ -1.93
ATG4AQ8WYN0 AC091179.1-201ENST00000461606 579 ntBASIC2.98□□□□□ -1.93
ATG4AQ8WYN0 AF186996.7-201ENST00000492781 209 ntBASIC2.98□□□□□ -1.93
ATG4AQ8WYN0 RNA5SP385-201ENST00000515947 110 ntBASIC2.98□□□□□ -1.93
ATG4AQ8WYN0 Y_RNA.715-201ENST00000517082 110 ntBASIC2.98□□□□□ -1.93
ATG4AQ8WYN0 AC091144.1-201ENST00000519573 138 ntBASIC2.98□□□□□ -1.93
ATG4AQ8WYN0 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.98□□□□□ -1.93
ATG4AQ8WYN0 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.98□□□□□ -1.93
ATG4AQ8WYN0 AC007375.1-201ENST00000554513 578 ntBASIC2.98□□□□□ -1.93
ATG4AQ8WYN0 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.98□□□□□ -1.93
ATG4AQ8WYN0 MIR5571-201ENST00000577998 113 ntBASIC2.98□□□□□ -1.93
ATG4AQ8WYN0 AL391813.1-201ENST00000603098 260 ntBASIC2.98□□□□□ -1.93
ATG4AQ8WYN0 PRR13P7-201ENST00000605538 430 ntBASIC2.98□□□□□ -1.93
ATG4AQ8WYN0 RNU6-91P-201ENST00000607774 107 ntBASIC2.98□□□□□ -1.93
ATG4AQ8WYN0 AL021879.1-201ENST00000611756 288 ntBASIC2.98□□□□□ -1.93
ATG4AQ8WYN0 RMST_6.1-201ENST00000611980 203 ntBASIC2.98□□□□□ -1.93
ATG4AQ8WYN0 AC002543.1-201ENST00000299783 1954 ntBASIC2.98□□□□□ -1.93
ATG4AQ8WYN0 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.97□□□□□ -1.93
ATG4AQ8WYN0 AC092268.1-201ENST00000342691 405 ntBASIC2.97□□□□□ -1.93
ATG4AQ8WYN0 RNA5SP374-201ENST00000362939 125 ntBASIC2.97□□□□□ -1.93
ATG4AQ8WYN0 RNU5B-2P-201ENST00000363036 113 ntBASIC2.97□□□□□ -1.93
ATG4AQ8WYN0 SNORA71.1-201ENST00000364523 117 ntBASIC2.97□□□□□ -1.93
ATG4AQ8WYN0 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.97□□□□□ -1.93
ATG4AQ8WYN0 AC078809.1-201ENST00000427601 140 ntBASIC2.97□□□□□ -1.93
ATG4AQ8WYN0 AC244670.1-201ENST00000436879 112 ntBASIC2.97□□□□□ -1.93
ATG4AQ8WYN0 GPM6BP3-201ENST00000442797 145 ntBASIC2.97□□□□□ -1.93
ATG4AQ8WYN0 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.97□□□□□ -1.93
ATG4AQ8WYN0 MTCO3P8-201ENST00000453691 755 ntBASIC2.97□□□□□ -1.93
ATG4AQ8WYN0 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.97□□□□□ -1.93
ATG4AQ8WYN0 TOMM22P6-201ENST00000465035 409 ntBASIC2.97□□□□□ -1.93
ATG4AQ8WYN0 AC087477.1-201ENST00000465747 340 ntBASIC2.97□□□□□ -1.93
ATG4AQ8WYN0 RPL30P12-201ENST00000474666 353 ntBASIC2.97□□□□□ -1.93
ATG4AQ8WYN0 AC010655.3-201ENST00000478818 450 ntBASIC2.97□□□□□ -1.93
ATG4AQ8WYN0 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.97□□□□□ -1.93
ATG4AQ8WYN0 MTND4LP22-201ENST00000508209 276 ntBASIC2.97□□□□□ -1.93
ATG4AQ8WYN0 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.97□□□□□ -1.93
ATG4AQ8WYN0 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.97□□□□□ -1.93
ATG4AQ8WYN0 AL355877.2-201ENST00000603670 358 ntBASIC2.97□□□□□ -1.93
ATG4AQ8WYN0 AC090115.4-201ENST00000609970 188 ntBASIC2.97□□□□□ -1.93
ATG4AQ8WYN0 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
ATG4AQ8WYN0 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.97□□□□□ -1.93
ATG4AQ8WYN0 AP000560.1-201ENST00000624150 1937 ntBASIC2.97□□□□□ -1.93
ATG4AQ8WYN0 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
ATG4AQ8WYN0 AL079305.1-201ENST00000623159 3008 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms