Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 Y_RNA.387-201ENST00000383918 102 ntBASIC2.47□□□□□ -2.01
SLC44A1Q8WWI5 MIR544A-201ENST00000384855 91 ntBASIC2.47□□□□□ -2.01
SLC44A1Q8WWI5 AL133475.1-201ENST00000404414 305 ntBASIC2.47□□□□□ -2.01
SLC44A1Q8WWI5 RN7SKP61-201ENST00000410642 295 ntBASIC2.47□□□□□ -2.01
SLC44A1Q8WWI5 RNU4-14P-201ENST00000410858 122 ntBASIC2.47□□□□□ -2.01
SLC44A1Q8WWI5 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.47□□□□□ -2.01
SLC44A1Q8WWI5 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.47□□□□□ -2.01
SLC44A1Q8WWI5 AL031659.1-201ENST00000447075 539 ntBASIC2.47□□□□□ -2.01
SLC44A1Q8WWI5 AL109933.2-201ENST00000452651 260 ntBASIC2.47□□□□□ -2.01
SLC44A1Q8WWI5 RPL36AP48-201ENST00000485521 314 ntBASIC2.47□□□□□ -2.01
SLC44A1Q8WWI5 AC026782.1-201ENST00000512952 449 ntBASIC2.47□□□□□ -2.01
SLC44A1Q8WWI5 RNA5SP112-201ENST00000515937 99 ntBASIC2.47□□□□□ -2.01
SLC44A1Q8WWI5 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.47□□□□□ -2.01
SLC44A1Q8WWI5 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.47□□□□□ -2.01
SLC44A1Q8WWI5 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.47□□□□□ -2.01
SLC44A1Q8WWI5 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.47□□□□□ -2.01
SLC44A1Q8WWI5 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.47□□□□□ -2.01
SLC44A1Q8WWI5 AL355375.2-201ENST00000574825 175 ntBASIC2.47□□□□□ -2.01
SLC44A1Q8WWI5 MIR4298-201ENST00000584380 73 ntBASIC2.47□□□□□ -2.01
SLC44A1Q8WWI5 MIR4765-201ENST00000585007 77 ntBASIC2.47□□□□□ -2.01
SLC44A1Q8WWI5 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.47□□□□□ -2.01
SLC44A1Q8WWI5 MIR7157-201ENST00000635801 60 ntBASIC2.47□□□□□ -2.01
SLC44A1Q8WWI5 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.47□□□□□ -2.01
SLC44A1Q8WWI5 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SLC44A1Q8WWI5 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.46□□□□□ -2.01
SLC44A1Q8WWI5 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SLC44A1Q8WWI5 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.46□□□□□ -2.02
SLC44A1Q8WWI5 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.46□□□□□ -2.02
SLC44A1Q8WWI5 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
SLC44A1Q8WWI5 RNU6-797P-201ENST00000363101 109 ntBASIC2.46□□□□□ -2.02
SLC44A1Q8WWI5 RNU6-43P-201ENST00000384302 107 ntBASIC2.46□□□□□ -2.02
SLC44A1Q8WWI5 RNU6-790P-201ENST00000384479 105 ntBASIC2.46□□□□□ -2.02
SLC44A1Q8WWI5 RNU6-306P-201ENST00000384617 107 ntBASIC2.46□□□□□ -2.02
SLC44A1Q8WWI5 BTF3L4P2-201ENST00000392798 346 ntBASIC2.46□□□□□ -2.02
SLC44A1Q8WWI5 RNU6-1140P-201ENST00000410517 106 ntBASIC2.46□□□□□ -2.02
SLC44A1Q8WWI5 RNU6-1328P-201ENST00000410938 106 ntBASIC2.46□□□□□ -2.02
SLC44A1Q8WWI5 AC097463.2-201ENST00000421074 142 ntBASIC2.46□□□□□ -2.02
SLC44A1Q8WWI5 AC063976.3-201ENST00000426849 329 ntBASIC2.46□□□□□ -2.02
SLC44A1Q8WWI5 MTND3P9-201ENST00000429526 346 ntBASIC2.46□□□□□ -2.02
SLC44A1Q8WWI5 AL445687.1-201ENST00000439946 251 ntBASIC2.46□□□□□ -2.02
SLC44A1Q8WWI5 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.46□□□□□ -2.02
SLC44A1Q8WWI5 RPL39P29-201ENST00000447779 157 ntBASIC2.46□□□□□ -2.02
SLC44A1Q8WWI5 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.46□□□□□ -2.02
SLC44A1Q8WWI5 ACA59.1-201ENST00000515966 143 ntBASIC2.46□□□□□ -2.02
SLC44A1Q8WWI5 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.46□□□□□ -2.02
SLC44A1Q8WWI5 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.46□□□□□ -2.02
SLC44A1Q8WWI5 AC115990.1-201ENST00000526957 301 ntBASIC2.46□□□□□ -2.02
SLC44A1Q8WWI5 AC016256.1-201ENST00000547971 354 ntBASIC2.46□□□□□ -2.02
SLC44A1Q8WWI5 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.46□□□□□ -2.02
SLC44A1Q8WWI5 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.46□□□□□ -2.02
SLC44A1Q8WWI5 MYL12BP1-201ENST00000569826 507 ntBASIC2.46□□□□□ -2.02
SLC44A1Q8WWI5 MIR3162-201ENST00000581818 82 ntBASIC2.46□□□□□ -2.02
SLC44A1Q8WWI5 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.46□□□□□ -2.02
SLC44A1Q8WWI5 AL136360.1-201ENST00000503377 1900 ntBASIC2.46□□□□□ -2.02
SLC44A1Q8WWI5 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.45□□□□□ -2.02
SLC44A1Q8WWI5 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SLC44A1Q8WWI5 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.45□□□□□ -2.02
SLC44A1Q8WWI5 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SLC44A1Q8WWI5 MIR449A-201ENST00000362113 91 ntBASIC2.45□□□□□ -2.02
SLC44A1Q8WWI5 RNU6-859P-201ENST00000362728 107 ntBASIC2.45□□□□□ -2.02
SLC44A1Q8WWI5 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.45□□□□□ -2.02
SLC44A1Q8WWI5 Y_RNA.384-201ENST00000383909 102 ntBASIC2.45□□□□□ -2.02
SLC44A1Q8WWI5 RNU6-784P-201ENST00000384330 106 ntBASIC2.45□□□□□ -2.02
SLC44A1Q8WWI5 RNU6-1297P-201ENST00000384415 104 ntBASIC2.45□□□□□ -2.02
SLC44A1Q8WWI5 RNU1-57P-201ENST00000384491 166 ntBASIC2.45□□□□□ -2.02
SLC44A1Q8WWI5 Y_RNA.509-201ENST00000384506 99 ntBASIC2.45□□□□□ -2.02
SLC44A1Q8WWI5 MIR27B-201ENST00000385129 97 ntBASIC2.45□□□□□ -2.02
SLC44A1Q8WWI5 AL591034.2-201ENST00000402839 359 ntBASIC2.45□□□□□ -2.02
SLC44A1Q8WWI5 RNU6-174P-201ENST00000410406 106 ntBASIC2.45□□□□□ -2.02
SLC44A1Q8WWI5 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.45□□□□□ -2.02
SLC44A1Q8WWI5 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.45□□□□□ -2.02
SLC44A1Q8WWI5 EIF1AXP1-201ENST00000419267 435 ntBASIC2.45□□□□□ -2.02
SLC44A1Q8WWI5 EIF4EP2-201ENST00000422816 654 ntBASIC2.45□□□□□ -2.02
SLC44A1Q8WWI5 AC078809.1-201ENST00000427601 140 ntBASIC2.45□□□□□ -2.02
SLC44A1Q8WWI5 USP9YP30-201ENST00000430729 455 ntBASIC2.45□□□□□ -2.02
SLC44A1Q8WWI5 Z98742.2-201ENST00000431564 187 ntBASIC2.45□□□□□ -2.02
SLC44A1Q8WWI5 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.45□□□□□ -2.02
SLC44A1Q8WWI5 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.45□□□□□ -2.02
SLC44A1Q8WWI5 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SLC44A1Q8WWI5 AC112771.1-201ENST00000463581 102 ntBASIC2.45□□□□□ -2.02
SLC44A1Q8WWI5 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.45□□□□□ -2.02
SLC44A1Q8WWI5 Y_RNA.708-201ENST00000516950 96 ntBASIC2.45□□□□□ -2.02
SLC44A1Q8WWI5 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.45□□□□□ -2.02
SLC44A1Q8WWI5 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.45□□□□□ -2.02
SLC44A1Q8WWI5 AC011494.1-201ENST00000596454 237 ntBASIC2.45□□□□□ -2.02
SLC44A1Q8WWI5 MIR3976-201ENST00000606807 139 ntBASIC2.45□□□□□ -2.02
SLC44A1Q8WWI5 AC067747.1-201ENST00000608026 250 ntBASIC2.45□□□□□ -2.02
SLC44A1Q8WWI5 AL359757.2-201ENST00000624309 274 ntBASIC2.45□□□□□ -2.02
SLC44A1Q8WWI5 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
SLC44A1Q8WWI5 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.45□□□□□ -2.02
SLC44A1Q8WWI5 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
SLC44A1Q8WWI5 Z75746.1-201ENST00000440243 2080 ntBASIC2.45□□□□□ -2.02
SLC44A1Q8WWI5 KPNA2P1-201ENST00000458289 1591 ntBASIC2.44□□□□□ -2.02
SLC44A1Q8WWI5 Y_RNA.61-201ENST00000362835 102 ntBASIC2.44□□□□□ -2.02
SLC44A1Q8WWI5 RNU6-529P-201ENST00000363383 104 ntBASIC2.44□□□□□ -2.02
SLC44A1Q8WWI5 MIR196B-201ENST00000384852 84 ntBASIC2.44□□□□□ -2.02
SLC44A1Q8WWI5 MIR521-1-201ENST00000384902 87 ntBASIC2.44□□□□□ -2.02
SLC44A1Q8WWI5 SNORA26.3-201ENST00000391119 136 ntBASIC2.44□□□□□ -2.02
SLC44A1Q8WWI5 MTCYBP4-201ENST00000401524 249 ntBASIC2.44□□□□□ -2.02
SLC44A1Q8WWI5 Y_RNA.594-201ENST00000410373 140 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms