Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
SH3RF3Q8TEJ3 ZNF826P-207ENST00000622273 1910 ntBASIC3.62□□□□□ -1.83
SH3RF3Q8TEJ3 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
SH3RF3Q8TEJ3 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SH3RF3Q8TEJ3 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SH3RF3Q8TEJ3 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.61□□□□□ -1.83
SH3RF3Q8TEJ3 RPL9P7-201ENST00000330965 580 ntBASIC3.61□□□□□ -1.83
SH3RF3Q8TEJ3 SNORD113-8-201ENST00000363497 74 ntBASIC3.61□□□□□ -1.83
SH3RF3Q8TEJ3 Y_RNA.240-201ENST00000364469 95 ntBASIC3.61□□□□□ -1.83
SH3RF3Q8TEJ3 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.61□□□□□ -1.83
SH3RF3Q8TEJ3 RNU6-22P-201ENST00000384355 107 ntBASIC3.61□□□□□ -1.83
SH3RF3Q8TEJ3 RNU6-1117P-201ENST00000384525 104 ntBASIC3.61□□□□□ -1.83
SH3RF3Q8TEJ3 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
SH3RF3Q8TEJ3 AL079342.1-201ENST00000401460 267 ntBASIC3.61□□□□□ -1.83
SH3RF3Q8TEJ3 Y_RNA.602-201ENST00000410535 92 ntBASIC3.61□□□□□ -1.83
SH3RF3Q8TEJ3 RNU6-651P-201ENST00000411040 105 ntBASIC3.61□□□□□ -1.83
SH3RF3Q8TEJ3 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.61□□□□□ -1.83
SH3RF3Q8TEJ3 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.61□□□□□ -1.83
SH3RF3Q8TEJ3 PPP1R11P2-201ENST00000423543 382 ntBASIC3.61□□□□□ -1.83
SH3RF3Q8TEJ3 AL513043.1-201ENST00000439124 535 ntBASIC3.61□□□□□ -1.83
SH3RF3Q8TEJ3 RPS12P18-201ENST00000442381 270 ntBASIC3.61□□□□□ -1.83
SH3RF3Q8TEJ3 RPL37P4-201ENST00000448908 268 ntBASIC3.61□□□□□ -1.83
SH3RF3Q8TEJ3 AC234775.1-201ENST00000454247 670 ntBASIC3.61□□□□□ -1.83
SH3RF3Q8TEJ3 U8.22-201ENST00000459141 133 ntBASIC3.61□□□□□ -1.83
SH3RF3Q8TEJ3 RNU6-953P-201ENST00000459154 107 ntBASIC3.61□□□□□ -1.83
SH3RF3Q8TEJ3 RPL9P9-202ENST00000466501 579 ntBASIC3.61□□□□□ -1.83
SH3RF3Q8TEJ3 SUMO2P6-201ENST00000505273 288 ntBASIC3.61□□□□□ -1.83
SH3RF3Q8TEJ3 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.61□□□□□ -1.83
SH3RF3Q8TEJ3 AC009318.2-201ENST00000610917 651 ntBASIC3.61□□□□□ -1.83
SH3RF3Q8TEJ3 AL450472.3-201ENST00000615578 367 ntBASIC3.61□□□□□ -1.83
SH3RF3Q8TEJ3 AC002076.2-201ENST00000617362 122 ntBASIC3.61□□□□□ -1.83
SH3RF3Q8TEJ3 AC007318.2-201ENST00000620999 243 ntBASIC3.61□□□□□ -1.83
SH3RF3Q8TEJ3 AC007785.2-201ENST00000598627 1916 ntBASIC3.61□□□□□ -1.83
SH3RF3Q8TEJ3 AC000403.1-201ENST00000613696 3585 ntBASIC3.61□□□□□ -1.83
SH3RF3Q8TEJ3 HAUS6P2-201ENST00000433254 2404 ntBASIC3.61□□□□□ -1.83
SH3RF3Q8TEJ3 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SH3RF3Q8TEJ3 RNU6-1020P-201ENST00000363684 107 ntBASIC3.6□□□□□ -1.83
SH3RF3Q8TEJ3 Y_RNA.358-201ENST00000365491 99 ntBASIC3.6□□□□□ -1.83
SH3RF3Q8TEJ3 Y_RNA.398-201ENST00000383952 99 ntBASIC3.6□□□□□ -1.83
SH3RF3Q8TEJ3 RNU6-937P-201ENST00000384325 106 ntBASIC3.6□□□□□ -1.83
SH3RF3Q8TEJ3 RNU6-933P-201ENST00000384424 107 ntBASIC3.6□□□□□ -1.83
SH3RF3Q8TEJ3 RNY3P4-201ENST00000384428 101 ntBASIC3.6□□□□□ -1.83
SH3RF3Q8TEJ3 RNU6-918P-201ENST00000391219 106 ntBASIC3.6□□□□□ -1.83
SH3RF3Q8TEJ3 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.6□□□□□ -1.83
SH3RF3Q8TEJ3 MIR1290-201ENST00000408735 78 ntBASIC3.6□□□□□ -1.83
SH3RF3Q8TEJ3 AC022018.1-201ENST00000430685 241 ntBASIC3.6□□□□□ -1.83
SH3RF3Q8TEJ3 RNU6-1037P-201ENST00000459571 107 ntBASIC3.6□□□□□ -1.83
SH3RF3Q8TEJ3 RN7SL20P-201ENST00000488827 297 ntBASIC3.6□□□□□ -1.83
SH3RF3Q8TEJ3 AC022493.1-201ENST00000492984 337 ntBASIC3.6□□□□□ -1.83
SH3RF3Q8TEJ3 MRPS18CP4-201ENST00000535821 231 ntBASIC3.6□□□□□ -1.83
SH3RF3Q8TEJ3 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.6□□□□□ -1.83
SH3RF3Q8TEJ3 MIR548AC-201ENST00000585049 88 ntBASIC3.6□□□□□ -1.83
SH3RF3Q8TEJ3 AL078605.1-201ENST00000603529 500 ntBASIC3.6□□□□□ -1.83
SH3RF3Q8TEJ3 RMST_4.1-201ENST00000616886 107 ntBASIC3.6□□□□□ -1.83
SH3RF3Q8TEJ3 MIR6852-201ENST00000621699 66 ntBASIC3.6□□□□□ -1.83
SH3RF3Q8TEJ3 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SH3RF3Q8TEJ3 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.6□□□□□ -1.83
SH3RF3Q8TEJ3 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.6□□□□□ -1.83
SH3RF3Q8TEJ3 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
SH3RF3Q8TEJ3 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
SH3RF3Q8TEJ3 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SH3RF3Q8TEJ3 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SH3RF3Q8TEJ3 CUL1P1-201ENST00000509510 2425 ntBASIC3.59□□□□□ -1.83
SH3RF3Q8TEJ3 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.59□□□□□ -1.83
SH3RF3Q8TEJ3 RNU1-75P-201ENST00000347264 129 ntBASIC3.59□□□□□ -1.83
SH3RF3Q8TEJ3 U3.13-201ENST00000364804 214 ntBASIC3.59□□□□□ -1.83
SH3RF3Q8TEJ3 Y_RNA.292-201ENST00000364904 97 ntBASIC3.59□□□□□ -1.83
SH3RF3Q8TEJ3 RNU6-290P-201ENST00000365212 101 ntBASIC3.59□□□□□ -1.83
SH3RF3Q8TEJ3 Y_RNA.510-201ENST00000384511 114 ntBASIC3.59□□□□□ -1.83
SH3RF3Q8TEJ3 MIR190B-201ENST00000401119 79 ntBASIC3.59□□□□□ -1.83
SH3RF3Q8TEJ3 MTCYBP2-201ENST00000407745 171 ntBASIC3.59□□□□□ -1.83
SH3RF3Q8TEJ3 RNU6-1135P-201ENST00000411083 103 ntBASIC3.59□□□□□ -1.83
SH3RF3Q8TEJ3 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.59□□□□□ -1.83
SH3RF3Q8TEJ3 NDUFB4P10-201ENST00000452541 359 ntBASIC3.59□□□□□ -1.83
SH3RF3Q8TEJ3 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.59□□□□□ -1.83
SH3RF3Q8TEJ3 Y_RNA.662-201ENST00000516028 97 ntBASIC3.59□□□□□ -1.83
SH3RF3Q8TEJ3 RNU6-479P-201ENST00000516348 105 ntBASIC3.59□□□□□ -1.83
SH3RF3Q8TEJ3 RNU6-1012P-201ENST00000516606 109 ntBASIC3.59□□□□□ -1.83
SH3RF3Q8TEJ3 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.59□□□□□ -1.83
SH3RF3Q8TEJ3 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.59□□□□□ -1.83
SH3RF3Q8TEJ3 MIR3921-201ENST00000577308 85 ntBASIC3.59□□□□□ -1.83
SH3RF3Q8TEJ3 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.59□□□□□ -1.83
SH3RF3Q8TEJ3 AC104465.1-201ENST00000611365 139 ntBASIC3.59□□□□□ -1.83
SH3RF3Q8TEJ3 AC068831.7-201ENST00000616954 363 ntBASIC3.59□□□□□ -1.83
SH3RF3Q8TEJ3 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.59□□□□□ -1.83
SH3RF3Q8TEJ3 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.59□□□□□ -1.83
SH3RF3Q8TEJ3 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.58□□□□□ -1.84
SH3RF3Q8TEJ3 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
SH3RF3Q8TEJ3 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SH3RF3Q8TEJ3 DEFB108F-201ENST00000344638 222 ntBASIC3.58□□□□□ -1.84
SH3RF3Q8TEJ3 Y_RNA.8-201ENST00000362353 102 ntBASIC3.58□□□□□ -1.84
SH3RF3Q8TEJ3 Y_RNA.44-201ENST00000362676 108 ntBASIC3.58□□□□□ -1.84
SH3RF3Q8TEJ3 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.58□□□□□ -1.84
SH3RF3Q8TEJ3 MIR521-1-201ENST00000384902 87 ntBASIC3.58□□□□□ -1.84
SH3RF3Q8TEJ3 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SH3RF3Q8TEJ3 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.58□□□□□ -1.84
SH3RF3Q8TEJ3 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.58□□□□□ -1.84
SH3RF3Q8TEJ3 RN7SL442P-201ENST00000473804 320 ntBASIC3.58□□□□□ -1.84
SH3RF3Q8TEJ3 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.58□□□□□ -1.84
SH3RF3Q8TEJ3 AC109479.2-201ENST00000517842 174 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms