Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SH3RF2Q8TEC5 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
SH3RF2Q8TEC5 AC010680.1-201ENST00000590024 3590 ntBASIC3.48□□□□□ -1.85
SH3RF2Q8TEC5 AL391987.6-201ENST00000305671 199 ntBASIC3.48□□□□□ -1.85
SH3RF2Q8TEC5 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.48□□□□□ -1.85
SH3RF2Q8TEC5 RNA5SP295-201ENST00000362655 121 ntBASIC3.48□□□□□ -1.85
SH3RF2Q8TEC5 RNU6-1285P-201ENST00000363480 105 ntBASIC3.48□□□□□ -1.85
SH3RF2Q8TEC5 SNORD115-8-201ENST00000363856 82 ntBASIC3.48□□□□□ -1.85
SH3RF2Q8TEC5 RNU6-280P-201ENST00000364145 104 ntBASIC3.48□□□□□ -1.85
SH3RF2Q8TEC5 SNORD115-38-201ENST00000365037 82 ntBASIC3.48□□□□□ -1.85
SH3RF2Q8TEC5 U8.10-201ENST00000384260 133 ntBASIC3.48□□□□□ -1.85
SH3RF2Q8TEC5 MIR128-1-201ENST00000384921 82 ntBASIC3.48□□□□□ -1.85
SH3RF2Q8TEC5 AL079342.1-201ENST00000401460 267 ntBASIC3.48□□□□□ -1.85
SH3RF2Q8TEC5 AP000567.1-201ENST00000406413 156 ntBASIC3.48□□□□□ -1.85
SH3RF2Q8TEC5 Z98941.1-201ENST00000407764 100 ntBASIC3.48□□□□□ -1.85
SH3RF2Q8TEC5 RPS26P42-201ENST00000413485 326 ntBASIC3.48□□□□□ -1.85
SH3RF2Q8TEC5 AC004383.1-201ENST00000438135 289 ntBASIC3.48□□□□□ -1.85
SH3RF2Q8TEC5 AC006028.1-201ENST00000438379 402 ntBASIC3.48□□□□□ -1.85
SH3RF2Q8TEC5 Z75741.1-201ENST00000446793 314 ntBASIC3.48□□□□□ -1.85
SH3RF2Q8TEC5 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC3.48□□□□□ -1.85
SH3RF2Q8TEC5 RPL30P12-201ENST00000474666 353 ntBASIC3.48□□□□□ -1.85
SH3RF2Q8TEC5 RPS29P2-201ENST00000479278 136 ntBASIC3.48□□□□□ -1.85
SH3RF2Q8TEC5 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.48□□□□□ -1.85
SH3RF2Q8TEC5 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.48□□□□□ -1.85
SH3RF2Q8TEC5 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.48□□□□□ -1.85
SH3RF2Q8TEC5 AC027288.2-201ENST00000553028 243 ntBASIC3.48□□□□□ -1.85
SH3RF2Q8TEC5 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.48□□□□□ -1.85
SH3RF2Q8TEC5 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.48□□□□□ -1.85
SH3RF2Q8TEC5 AC073410.2-201ENST00000603240 332 ntBASIC3.48□□□□□ -1.85
SH3RF2Q8TEC5 AC011373.1-201ENST00000607270 237 ntBASIC3.48□□□□□ -1.85
SH3RF2Q8TEC5 AC078938.1-201ENST00000620993 318 ntBASIC3.48□□□□□ -1.85
SH3RF2Q8TEC5 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.48□□□□□ -1.85
SH3RF2Q8TEC5 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.48□□□□□ -1.85
SH3RF2Q8TEC5 TNPO1P3-201ENST00000436471 2662 ntBASIC3.47□□□□□ -1.85
SH3RF2Q8TEC5 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SH3RF2Q8TEC5 AL136164.4-201ENST00000625013 2135 ntBASIC3.47□□□□□ -1.85
SH3RF2Q8TEC5 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.47□□□□□ -1.85
SH3RF2Q8TEC5 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.47□□□□□ -1.85
SH3RF2Q8TEC5 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SH3RF2Q8TEC5 RNU4-56P-201ENST00000364700 142 ntBASIC3.47□□□□□ -1.85
SH3RF2Q8TEC5 RNA5SP213-201ENST00000391031 106 ntBASIC3.47□□□□□ -1.85
SH3RF2Q8TEC5 AL357075.1-201ENST00000404107 726 ntBASIC3.47□□□□□ -1.85
SH3RF2Q8TEC5 RNA5SP38-201ENST00000410750 119 ntBASIC3.47□□□□□ -1.85
SH3RF2Q8TEC5 AC096649.2-201ENST00000416186 393 ntBASIC3.47□□□□□ -1.85
SH3RF2Q8TEC5 CYCSP48-201ENST00000417124 323 ntBASIC3.47□□□□□ -1.85
SH3RF2Q8TEC5 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.47□□□□□ -1.85
SH3RF2Q8TEC5 AC012306.1-201ENST00000423267 114 ntBASIC3.47□□□□□ -1.85
SH3RF2Q8TEC5 MTND4LP30-201ENST00000454092 297 ntBASIC3.47□□□□□ -1.85
SH3RF2Q8TEC5 AC098869.1-201ENST00000481627 292 ntBASIC3.47□□□□□ -1.85
SH3RF2Q8TEC5 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.47□□□□□ -1.85
SH3RF2Q8TEC5 Y_RNA.680-201ENST00000516441 93 ntBASIC3.47□□□□□ -1.85
SH3RF2Q8TEC5 RN7SKP49-201ENST00000516675 260 ntBASIC3.47□□□□□ -1.85
SH3RF2Q8TEC5 SNORA70.19-201ENST00000516717 90 ntBASIC3.47□□□□□ -1.85
SH3RF2Q8TEC5 MIR2276-201ENST00000516886 89 ntBASIC3.47□□□□□ -1.85
SH3RF2Q8TEC5 RNU6-58P-201ENST00000517143 103 ntBASIC3.47□□□□□ -1.85
SH3RF2Q8TEC5 AC136932.1-201ENST00000574771 208 ntBASIC3.47□□□□□ -1.85
SH3RF2Q8TEC5 MIR3136-201ENST00000583498 78 ntBASIC3.47□□□□□ -1.85
SH3RF2Q8TEC5 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SH3RF2Q8TEC5 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.46□□□□□ -1.85
SH3RF2Q8TEC5 AF127577.6-201ENST00000623352 2191 ntBASIC3.46□□□□□ -1.85
SH3RF2Q8TEC5 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SH3RF2Q8TEC5 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.46□□□□□ -1.86
SH3RF2Q8TEC5 MIR30E-201ENST00000362104 92 ntBASIC3.46□□□□□ -1.86
SH3RF2Q8TEC5 Y_RNA.60-201ENST00000362831 98 ntBASIC3.46□□□□□ -1.86
SH3RF2Q8TEC5 RNA5SP374-201ENST00000362939 125 ntBASIC3.46□□□□□ -1.86
SH3RF2Q8TEC5 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
SH3RF2Q8TEC5 RNU6-159P-201ENST00000391080 106 ntBASIC3.46□□□□□ -1.86
SH3RF2Q8TEC5 NDUFB4P4-201ENST00000404822 243 ntBASIC3.46□□□□□ -1.86
SH3RF2Q8TEC5 AC023141.4-201ENST00000412031 328 ntBASIC3.46□□□□□ -1.86
SH3RF2Q8TEC5 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.46□□□□□ -1.86
SH3RF2Q8TEC5 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.46□□□□□ -1.86
SH3RF2Q8TEC5 AC011471.1-201ENST00000585766 187 ntBASIC3.46□□□□□ -1.86
SH3RF2Q8TEC5 AC012433.1-201ENST00000588916 398 ntBASIC3.46□□□□□ -1.86
SH3RF2Q8TEC5 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.46□□□□□ -1.86
SH3RF2Q8TEC5 AC091152.3-201ENST00000604227 325 ntBASIC3.46□□□□□ -1.86
SH3RF2Q8TEC5 AP001282.2-201ENST00000616149 309 ntBASIC3.46□□□□□ -1.86
SH3RF2Q8TEC5 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.46□□□□□ -1.86
SH3RF2Q8TEC5 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
SH3RF2Q8TEC5 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SH3RF2Q8TEC5 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.45□□□□□ -1.86
SH3RF2Q8TEC5 AL513302.2-201ENST00000562313 1842 ntBASIC3.45□□□□□ -1.86
SH3RF2Q8TEC5 Y_RNA.20-201ENST00000362479 113 ntBASIC3.45□□□□□ -1.86
SH3RF2Q8TEC5 AP002088.1-201ENST00000382740 395 ntBASIC3.45□□□□□ -1.86
SH3RF2Q8TEC5 Y_RNA.416-201ENST00000384014 113 ntBASIC3.45□□□□□ -1.86
SH3RF2Q8TEC5 SNORD63-201ENST00000384262 68 ntBASIC3.45□□□□□ -1.86
SH3RF2Q8TEC5 Y_RNA.462-201ENST00000384268 102 ntBASIC3.45□□□□□ -1.86
SH3RF2Q8TEC5 RNU6-318P-201ENST00000384283 103 ntBASIC3.45□□□□□ -1.86
SH3RF2Q8TEC5 Y_RNA.477-201ENST00000384352 108 ntBASIC3.45□□□□□ -1.86
SH3RF2Q8TEC5 MIR10B-201ENST00000385011 110 ntBASIC3.45□□□□□ -1.86
SH3RF2Q8TEC5 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
SH3RF2Q8TEC5 Y_RNA.581-201ENST00000391017 97 ntBASIC3.45□□□□□ -1.86
SH3RF2Q8TEC5 EI24P2-201ENST00000397776 1076 ntBASIC3.45□□□□□ -1.86
SH3RF2Q8TEC5 SNORD12B-201ENST00000410433 91 ntBASIC3.45□□□□□ -1.86
SH3RF2Q8TEC5 WARS2P1-201ENST00000429678 537 ntBASIC3.45□□□□□ -1.86
SH3RF2Q8TEC5 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.45□□□□□ -1.86
SH3RF2Q8TEC5 SNRPGP3-201ENST00000469405 227 ntBASIC3.45□□□□□ -1.86
SH3RF2Q8TEC5 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.45□□□□□ -1.86
SH3RF2Q8TEC5 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.45□□□□□ -1.86
SH3RF2Q8TEC5 AC023824.2-201ENST00000566185 400 ntBASIC3.45□□□□□ -1.86
SH3RF2Q8TEC5 MIR5695-201ENST00000579717 85 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms