Protein–RNA interactions for Protein: Q8TE77

SSH3, Protein phosphatase Slingshot homolog 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3Q8TE77 Z98751.3-201ENST00000604447 521 ntBASIC3.31□□□□□ -1.88
SSH3Q8TE77 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.31□□□□□ -1.88
SSH3Q8TE77 AC110079.1-202ENST00000635213 138 ntBASIC3.31□□□□□ -1.88
SSH3Q8TE77 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SSH3Q8TE77 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
SSH3Q8TE77 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SSH3Q8TE77 RNU6-428P-201ENST00000362942 107 ntBASIC3.3□□□□□ -1.88
SSH3Q8TE77 RNU6-270P-201ENST00000364131 105 ntBASIC3.3□□□□□ -1.88
SSH3Q8TE77 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SSH3Q8TE77 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
SSH3Q8TE77 MIR1289-1-201ENST00000408836 144 ntBASIC3.3□□□□□ -1.88
SSH3Q8TE77 Y_RNA.618-201ENST00000410949 107 ntBASIC3.3□□□□□ -1.88
SSH3Q8TE77 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.3□□□□□ -1.88
SSH3Q8TE77 RPL23AP58-201ENST00000440453 469 ntBASIC3.3□□□□□ -1.88
SSH3Q8TE77 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.3□□□□□ -1.88
SSH3Q8TE77 AC114801.2-201ENST00000503825 781 ntBASIC3.3□□□□□ -1.88
SSH3Q8TE77 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.3□□□□□ -1.88
SSH3Q8TE77 RNA5SP282-201ENST00000516355 108 ntBASIC3.3□□□□□ -1.88
SSH3Q8TE77 AC131281.1-201ENST00000522984 164 ntBASIC3.3□□□□□ -1.88
SSH3Q8TE77 MIR4319-201ENST00000577285 85 ntBASIC3.3□□□□□ -1.88
SSH3Q8TE77 MIR5696-201ENST00000578474 85 ntBASIC3.3□□□□□ -1.88
SSH3Q8TE77 MIR5701-3-201ENST00000578890 82 ntBASIC3.3□□□□□ -1.88
SSH3Q8TE77 MIR5701-1-201ENST00000585138 82 ntBASIC3.3□□□□□ -1.88
SSH3Q8TE77 AC016727.2-201ENST00000603988 621 ntBASIC3.3□□□□□ -1.88
SSH3Q8TE77 AC124312.5-201ENST00000604451 268 ntBASIC3.3□□□□□ -1.88
SSH3Q8TE77 AL021879.1-201ENST00000611756 288 ntBASIC3.3□□□□□ -1.88
SSH3Q8TE77 MIR5701-2-201ENST00000615634 82 ntBASIC3.3□□□□□ -1.88
SSH3Q8TE77 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.3□□□□□ -1.88
SSH3Q8TE77 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.3□□□□□ -1.88
SSH3Q8TE77 MTND5P9-201ENST00000503854 1755 ntBASIC3.3□□□□□ -1.88
SSH3Q8TE77 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SSH3Q8TE77 RNU6-238P-201ENST00000363313 106 ntBASIC3.29□□□□□ -1.88
SSH3Q8TE77 RNY3P11-201ENST00000364153 102 ntBASIC3.29□□□□□ -1.88
SSH3Q8TE77 RNU5E-7P-201ENST00000365290 117 ntBASIC3.29□□□□□ -1.88
SSH3Q8TE77 SNORD14.1-201ENST00000365609 90 ntBASIC3.29□□□□□ -1.88
SSH3Q8TE77 RNU6-217P-201ENST00000384164 104 ntBASIC3.29□□□□□ -1.88
SSH3Q8TE77 RNU6-72P-201ENST00000384285 79 ntBASIC3.29□□□□□ -1.88
SSH3Q8TE77 RNU6-140P-201ENST00000384566 108 ntBASIC3.29□□□□□ -1.88
SSH3Q8TE77 MIR625-201ENST00000385047 85 ntBASIC3.29□□□□□ -1.88
SSH3Q8TE77 MT-TG-201ENST00000387429 68 ntBASIC3.29□□□□□ -1.88
SSH3Q8TE77 RNU6-1109P-201ENST00000391187 107 ntBASIC3.29□□□□□ -1.88
SSH3Q8TE77 U3.26-201ENST00000391236 204 ntBASIC3.29□□□□□ -1.88
SSH3Q8TE77 AL139281.1-201ENST00000422120 335 ntBASIC3.29□□□□□ -1.88
SSH3Q8TE77 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SSH3Q8TE77 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.29□□□□□ -1.88
SSH3Q8TE77 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.29□□□□□ -1.88
SSH3Q8TE77 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.29□□□□□ -1.88
SSH3Q8TE77 RN7SKP282-201ENST00000516824 299 ntBASIC3.29□□□□□ -1.88
SSH3Q8TE77 RNU6-612P-201ENST00000516909 102 ntBASIC3.29□□□□□ -1.88
SSH3Q8TE77 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.29□□□□□ -1.88
SSH3Q8TE77 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.29□□□□□ -1.88
SSH3Q8TE77 MIR4635-201ENST00000583759 79 ntBASIC3.29□□□□□ -1.88
SSH3Q8TE77 AC004832.5-201ENST00000608677 401 ntBASIC3.29□□□□□ -1.88
SSH3Q8TE77 AC009318.2-201ENST00000610917 651 ntBASIC3.29□□□□□ -1.88
SSH3Q8TE77 AC007792.1-201ENST00000623023 402 ntBASIC3.29□□□□□ -1.88
SSH3Q8TE77 SCARNA4-202ENST00000625402 129 ntBASIC3.29□□□□□ -1.88
SSH3Q8TE77 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.29□□□□□ -1.88
SSH3Q8TE77 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SSH3Q8TE77 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SSH3Q8TE77 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SSH3Q8TE77 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
SSH3Q8TE77 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SSH3Q8TE77 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.28□□□□□ -1.88
SSH3Q8TE77 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SSH3Q8TE77 FTLP6-201ENST00000355274 422 ntBASIC3.28□□□□□ -1.88
SSH3Q8TE77 RNU6-78P-201ENST00000362897 107 ntBASIC3.28□□□□□ -1.88
SSH3Q8TE77 RNU6-595P-201ENST00000363944 107 ntBASIC3.28□□□□□ -1.88
SSH3Q8TE77 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SSH3Q8TE77 MIR1252-201ENST00000408861 65 ntBASIC3.28□□□□□ -1.88
SSH3Q8TE77 AC063976.3-201ENST00000426849 329 ntBASIC3.28□□□□□ -1.88
SSH3Q8TE77 MTND3P9-201ENST00000429526 346 ntBASIC3.28□□□□□ -1.88
SSH3Q8TE77 AC108059.2-201ENST00000434626 151 ntBASIC3.28□□□□□ -1.88
SSH3Q8TE77 AL109933.2-201ENST00000452651 260 ntBASIC3.28□□□□□ -1.88
SSH3Q8TE77 AC079354.2-201ENST00000453523 154 ntBASIC3.28□□□□□ -1.88
SSH3Q8TE77 RPS29P27-201ENST00000463711 170 ntBASIC3.28□□□□□ -1.88
SSH3Q8TE77 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.28□□□□□ -1.88
SSH3Q8TE77 RNU6-703P-201ENST00000516946 107 ntBASIC3.28□□□□□ -1.88
SSH3Q8TE77 Y_RNA.715-201ENST00000517082 110 ntBASIC3.28□□□□□ -1.88
SSH3Q8TE77 AC040926.1-201ENST00000530195 238 ntBASIC3.28□□□□□ -1.88
SSH3Q8TE77 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.28□□□□□ -1.88
SSH3Q8TE77 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.28□□□□□ -1.88
SSH3Q8TE77 AC006600.1-201ENST00000572529 153 ntBASIC3.28□□□□□ -1.88
SSH3Q8TE77 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.28□□□□□ -1.88
SSH3Q8TE77 AC100812.1-201ENST00000607622 580 ntBASIC3.28□□□□□ -1.88
SSH3Q8TE77 MIR1244-1-201ENST00000612829 85 ntBASIC3.28□□□□□ -1.88
SSH3Q8TE77 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.28□□□□□ -1.88
SSH3Q8TE77 AC090617.7-201ENST00000623952 126 ntBASIC3.28□□□□□ -1.88
SSH3Q8TE77 MIR1244-3-201ENST00000635744 85 ntBASIC3.28□□□□□ -1.88
SSH3Q8TE77 MIR1244-2-201ENST00000636449 85 ntBASIC3.28□□□□□ -1.88
SSH3Q8TE77 MIR1244-4-202ENST00000636813 85 ntBASIC3.28□□□□□ -1.88
SSH3Q8TE77 U6.99-201ENST00000637524 83 ntBASIC3.28□□□□□ -1.88
SSH3Q8TE77 U4.7-201ENST00000638126 106 ntBASIC3.28□□□□□ -1.88
SSH3Q8TE77 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.28□□□□□ -1.88
SSH3Q8TE77 ZNF72P-201ENST00000425869 1908 ntBASIC3.28□□□□□ -1.88
SSH3Q8TE77 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
SSH3Q8TE77 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.28□□□□□ -1.88
SSH3Q8TE77 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SSH3Q8TE77 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SSH3Q8TE77 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.27□□□□□ -1.89
SSH3Q8TE77 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms