Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 SNRPGP7-201ENST00000469016 106 ntBASIC4.98□□□□□ -1.61
NKX2-3Q8TAU0 RN7SL812P-201ENST00000493791 279 ntBASIC4.98□□□□□ -1.61
NKX2-3Q8TAU0 Y_RNA.690-201ENST00000516603 95 ntBASIC4.98□□□□□ -1.61
NKX2-3Q8TAU0 RNU6-1183P-201ENST00000517054 60 ntBASIC4.98□□□□□ -1.61
NKX2-3Q8TAU0 IFITM8P-201ENST00000522529 394 ntBASIC4.98□□□□□ -1.61
NKX2-3Q8TAU0 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.98□□□□□ -1.61
NKX2-3Q8TAU0 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.98□□□□□ -1.61
NKX2-3Q8TAU0 FAM27D1-201ENST00000612308 341 ntBASIC4.98□□□□□ -1.61
NKX2-3Q8TAU0 AL138721.1-201ENST00000616756 179 ntBASIC4.98□□□□□ -1.61
NKX2-3Q8TAU0 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.98□□□□□ -1.61
NKX2-3Q8TAU0 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.98□□□□□ -1.61
NKX2-3Q8TAU0 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.98□□□□□ -1.61
NKX2-3Q8TAU0 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.98□□□□□ -1.61
NKX2-3Q8TAU0 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.98□□□□□ -1.61
NKX2-3Q8TAU0 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.98□□□□□ -1.61
NKX2-3Q8TAU0 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
NKX2-3Q8TAU0 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
NKX2-3Q8TAU0 RNA5SP235-201ENST00000365411 114 ntBASIC4.97□□□□□ -1.61
NKX2-3Q8TAU0 Y_RNA.361-201ENST00000365515 120 ntBASIC4.97□□□□□ -1.61
NKX2-3Q8TAU0 SNORA51.5-201ENST00000384126 131 ntBASIC4.97□□□□□ -1.61
NKX2-3Q8TAU0 MIR124-3-201ENST00000384866 87 ntBASIC4.97□□□□□ -1.61
NKX2-3Q8TAU0 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NKX2-3Q8TAU0 RPL21P65-201ENST00000406094 466 ntBASIC4.97□□□□□ -1.61
NKX2-3Q8TAU0 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.97□□□□□ -1.61
NKX2-3Q8TAU0 SNRPEP9-201ENST00000436794 238 ntBASIC4.97□□□□□ -1.61
NKX2-3Q8TAU0 KC877373.1-201ENST00000479066 408 ntBASIC4.97□□□□□ -1.61
NKX2-3Q8TAU0 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.97□□□□□ -1.61
NKX2-3Q8TAU0 AL160236.1-201ENST00000556317 195 ntBASIC4.97□□□□□ -1.61
NKX2-3Q8TAU0 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.97□□□□□ -1.61
NKX2-3Q8TAU0 AC009831.4-201ENST00000620744 325 ntBASIC4.97□□□□□ -1.61
NKX2-3Q8TAU0 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
NKX2-3Q8TAU0 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
NKX2-3Q8TAU0 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
NKX2-3Q8TAU0 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.97□□□□□ -1.61
NKX2-3Q8TAU0 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.97□□□□□ -1.61
NKX2-3Q8TAU0 AL136964.1-201ENST00000622038 2990 ntBASIC4.97□□□□□ -1.61
NKX2-3Q8TAU0 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NKX2-3Q8TAU0 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.61
NKX2-3Q8TAU0 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.96□□□□□ -1.61
NKX2-3Q8TAU0 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.96□□□□□ -1.62
NKX2-3Q8TAU0 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NKX2-3Q8TAU0 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
NKX2-3Q8TAU0 RNA5SP119-201ENST00000362715 117 ntBASIC4.96□□□□□ -1.62
NKX2-3Q8TAU0 RNU6-1336P-201ENST00000383886 109 ntBASIC4.96□□□□□ -1.62
NKX2-3Q8TAU0 RNU6-1113P-201ENST00000384348 107 ntBASIC4.96□□□□□ -1.62
NKX2-3Q8TAU0 MIR29B2-201ENST00000385055 81 ntBASIC4.96□□□□□ -1.62
NKX2-3Q8TAU0 SNORA48.5-201ENST00000391143 135 ntBASIC4.96□□□□□ -1.62
NKX2-3Q8TAU0 MIR1290-201ENST00000408735 78 ntBASIC4.96□□□□□ -1.62
NKX2-3Q8TAU0 AL691449.1-201ENST00000426570 421 ntBASIC4.96□□□□□ -1.62
NKX2-3Q8TAU0 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.96□□□□□ -1.62
NKX2-3Q8TAU0 RPL26P9-201ENST00000457466 433 ntBASIC4.96□□□□□ -1.62
NKX2-3Q8TAU0 AC108022.1-201ENST00000493466 478 ntBASIC4.96□□□□□ -1.62
NKX2-3Q8TAU0 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.96□□□□□ -1.62
NKX2-3Q8TAU0 AC099522.1-202ENST00000514718 367 ntBASIC4.96□□□□□ -1.62
NKX2-3Q8TAU0 RNU6-197P-201ENST00000516680 100 ntBASIC4.96□□□□□ -1.62
NKX2-3Q8TAU0 SNORA31.20-201ENST00000517111 133 ntBASIC4.96□□□□□ -1.62
NKX2-3Q8TAU0 AL031274.2-201ENST00000599419 203 ntBASIC4.96□□□□□ -1.62
NKX2-3Q8TAU0 SNRPGP20-201ENST00000604477 205 ntBASIC4.96□□□□□ -1.62
NKX2-3Q8TAU0 AC012442.3-202ENST00000636742 206 ntBASIC4.96□□□□□ -1.62
NKX2-3Q8TAU0 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
NKX2-3Q8TAU0 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
NKX2-3Q8TAU0 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NKX2-3Q8TAU0 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
NKX2-3Q8TAU0 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NKX2-3Q8TAU0 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.96□□□□□ -1.62
NKX2-3Q8TAU0 MARK2P15-201ENST00000432204 2186 ntBASIC4.95□□□□□ -1.62
NKX2-3Q8TAU0 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NKX2-3Q8TAU0 AC118273.1-201ENST00000525324 3006 ntBASIC4.95□□□□□ -1.62
NKX2-3Q8TAU0 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NKX2-3Q8TAU0 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.95□□□□□ -1.62
NKX2-3Q8TAU0 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NKX2-3Q8TAU0 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NKX2-3Q8TAU0 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NKX2-3Q8TAU0 RNA5SP130-201ENST00000364431 114 ntBASIC4.95□□□□□ -1.62
NKX2-3Q8TAU0 Y_RNA.544-201ENST00000384650 113 ntBASIC4.95□□□□□ -1.62
NKX2-3Q8TAU0 MIR1278-201ENST00000408753 81 ntBASIC4.95□□□□□ -1.62
NKX2-3Q8TAU0 Y_RNA.622-201ENST00000411091 108 ntBASIC4.95□□□□□ -1.62
NKX2-3Q8TAU0 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.95□□□□□ -1.62
NKX2-3Q8TAU0 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC4.95□□□□□ -1.62
NKX2-3Q8TAU0 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC4.95□□□□□ -1.62
NKX2-3Q8TAU0 AL451050.1-201ENST00000450126 415 ntBASIC4.95□□□□□ -1.62
NKX2-3Q8TAU0 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.95□□□□□ -1.62
NKX2-3Q8TAU0 RNU6ATAC17P-201ENST00000516074 71 ntBASIC4.95□□□□□ -1.62
NKX2-3Q8TAU0 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.95□□□□□ -1.62
NKX2-3Q8TAU0 AC022655.2-201ENST00000577280 318 ntBASIC4.95□□□□□ -1.62
NKX2-3Q8TAU0 MIR5685-201ENST00000579080 79 ntBASIC4.95□□□□□ -1.62
NKX2-3Q8TAU0 MIR4298-201ENST00000584380 73 ntBASIC4.95□□□□□ -1.62
NKX2-3Q8TAU0 AC136601.2-201ENST00000604356 474 ntBASIC4.95□□□□□ -1.62
NKX2-3Q8TAU0 AC007179.3-201ENST00000604976 235 ntBASIC4.95□□□□□ -1.62
NKX2-3Q8TAU0 AC019176.2-201ENST00000611579 315 ntBASIC4.95□□□□□ -1.62
NKX2-3Q8TAU0 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NKX2-3Q8TAU0 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.95□□□□□ -1.62
NKX2-3Q8TAU0 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
NKX2-3Q8TAU0 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
NKX2-3Q8TAU0 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NKX2-3Q8TAU0 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.94□□□□□ -1.62
NKX2-3Q8TAU0 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
NKX2-3Q8TAU0 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NKX2-3Q8TAU0 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NKX2-3Q8TAU0 MIR488-201ENST00000365739 83 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 230.1 ms