Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AC074133.1-201ENST00000515696 183 ntBASIC3.53□□□□□ -1.84
NUP43Q8NFH3 RNU5F-8P-201ENST00000515941 111 ntBASIC3.53□□□□□ -1.84
NUP43Q8NFH3 RNU6-191P-201ENST00000516295 94 ntBASIC3.53□□□□□ -1.84
NUP43Q8NFH3 SNORA62.6-201ENST00000606322 83 ntBASIC3.53□□□□□ -1.84
NUP43Q8NFH3 AC004832.4-201ENST00000608952 331 ntBASIC3.53□□□□□ -1.84
NUP43Q8NFH3 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NUP43Q8NFH3 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
NUP43Q8NFH3 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.53□□□□□ -1.84
NUP43Q8NFH3 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NUP43Q8NFH3 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
NUP43Q8NFH3 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
NUP43Q8NFH3 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
NUP43Q8NFH3 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
NUP43Q8NFH3 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
NUP43Q8NFH3 Y_RNA.8-201ENST00000362353 102 ntBASIC3.52□□□□□ -1.85
NUP43Q8NFH3 RNU1-18P-201ENST00000363062 164 ntBASIC3.52□□□□□ -1.85
NUP43Q8NFH3 RNU4-80P-201ENST00000363200 141 ntBASIC3.52□□□□□ -1.85
NUP43Q8NFH3 RNU6-525P-201ENST00000363685 104 ntBASIC3.52□□□□□ -1.85
NUP43Q8NFH3 RNU5F-3P-201ENST00000363767 117 ntBASIC3.52□□□□□ -1.85
NUP43Q8NFH3 Y_RNA.179-201ENST00000363844 90 ntBASIC3.52□□□□□ -1.85
NUP43Q8NFH3 Y_RNA.304-201ENST00000365011 112 ntBASIC3.52□□□□□ -1.85
NUP43Q8NFH3 U3.39-201ENST00000408569 239 ntBASIC3.52□□□□□ -1.85
NUP43Q8NFH3 RNU2-37P-201ENST00000410695 177 ntBASIC3.52□□□□□ -1.85
NUP43Q8NFH3 RNU6-1199P-201ENST00000411249 104 ntBASIC3.52□□□□□ -1.85
NUP43Q8NFH3 ELOCP21-201ENST00000412558 336 ntBASIC3.52□□□□□ -1.85
NUP43Q8NFH3 AC019205.3-201ENST00000424573 156 ntBASIC3.52□□□□□ -1.85
NUP43Q8NFH3 RPL23AP83-201ENST00000434984 473 ntBASIC3.52□□□□□ -1.85
NUP43Q8NFH3 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.52□□□□□ -1.85
NUP43Q8NFH3 AC091179.3-201ENST00000474761 144 ntBASIC3.52□□□□□ -1.85
NUP43Q8NFH3 AC090525.1-201ENST00000479116 478 ntBASIC3.52□□□□□ -1.85
NUP43Q8NFH3 RPS4XP13-201ENST00000483219 789 ntBASIC3.52□□□□□ -1.85
NUP43Q8NFH3 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.52□□□□□ -1.85
NUP43Q8NFH3 CYCSP23-201ENST00000519781 313 ntBASIC3.52□□□□□ -1.85
NUP43Q8NFH3 AP005660.1-201ENST00000522972 293 ntBASIC3.52□□□□□ -1.85
NUP43Q8NFH3 CYCSP30-201ENST00000546447 172 ntBASIC3.52□□□□□ -1.85
NUP43Q8NFH3 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.52□□□□□ -1.85
NUP43Q8NFH3 MIR4286-201ENST00000580651 93 ntBASIC3.52□□□□□ -1.85
NUP43Q8NFH3 MIR3145-201ENST00000580727 82 ntBASIC3.52□□□□□ -1.85
NUP43Q8NFH3 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.52□□□□□ -1.85
NUP43Q8NFH3 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.52□□□□□ -1.85
NUP43Q8NFH3 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NUP43Q8NFH3 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.52□□□□□ -1.85
NUP43Q8NFH3 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.52□□□□□ -1.85
NUP43Q8NFH3 AC106871.1-201ENST00000568324 3102 ntBASIC3.52□□□□□ -1.85
NUP43Q8NFH3 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
NUP43Q8NFH3 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
NUP43Q8NFH3 RNU6-653P-201ENST00000363074 106 ntBASIC3.51□□□□□ -1.85
NUP43Q8NFH3 Y_RNA.262-201ENST00000364641 102 ntBASIC3.51□□□□□ -1.85
NUP43Q8NFH3 SNORA72.2-201ENST00000365028 127 ntBASIC3.51□□□□□ -1.85
NUP43Q8NFH3 RNU6-211P-201ENST00000384047 107 ntBASIC3.51□□□□□ -1.85
NUP43Q8NFH3 MIR30B-201ENST00000384850 88 ntBASIC3.51□□□□□ -1.85
NUP43Q8NFH3 AL451074.5-201ENST00000415894 435 ntBASIC3.51□□□□□ -1.85
NUP43Q8NFH3 HMGN2P7-201ENST00000456186 273 ntBASIC3.51□□□□□ -1.85
NUP43Q8NFH3 RN7SL542P-201ENST00000467147 294 ntBASIC3.51□□□□□ -1.85
NUP43Q8NFH3 AC084357.1-201ENST00000473404 255 ntBASIC3.51□□□□□ -1.85
NUP43Q8NFH3 AC006445.2-201ENST00000510061 472 ntBASIC3.51□□□□□ -1.85
NUP43Q8NFH3 RN7SKP83-201ENST00000516512 178 ntBASIC3.51□□□□□ -1.85
NUP43Q8NFH3 AP002001.1-203ENST00000534002 267 ntBASIC3.51□□□□□ -1.85
NUP43Q8NFH3 HIGD1AP1-201ENST00000550979 275 ntBASIC3.51□□□□□ -1.85
NUP43Q8NFH3 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.51□□□□□ -1.85
NUP43Q8NFH3 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.51□□□□□ -1.85
NUP43Q8NFH3 AL713866.2-201ENST00000603579 219 ntBASIC3.51□□□□□ -1.85
NUP43Q8NFH3 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.51□□□□□ -1.85
NUP43Q8NFH3 AC108706.1-201ENST00000611053 297 ntBASIC3.51□□□□□ -1.85
NUP43Q8NFH3 AL365265.1-201ENST00000621045 234 ntBASIC3.51□□□□□ -1.85
NUP43Q8NFH3 AC091932.3-201ENST00000624223 323 ntBASIC3.51□□□□□ -1.85
NUP43Q8NFH3 snoU18.1-201ENST00000629629 71 ntBASIC3.51□□□□□ -1.85
NUP43Q8NFH3 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.51□□□□□ -1.85
NUP43Q8NFH3 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
NUP43Q8NFH3 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NUP43Q8NFH3 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
NUP43Q8NFH3 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NUP43Q8NFH3 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NUP43Q8NFH3 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.5□□□□□ -1.85
NUP43Q8NFH3 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NUP43Q8NFH3 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NUP43Q8NFH3 RNU6-245P-201ENST00000384020 107 ntBASIC3.5□□□□□ -1.85
NUP43Q8NFH3 RNU6-793P-201ENST00000384233 104 ntBASIC3.5□□□□□ -1.85
NUP43Q8NFH3 RNA5SP424-201ENST00000390988 115 ntBASIC3.5□□□□□ -1.85
NUP43Q8NFH3 RNU5E-9P-201ENST00000411164 104 ntBASIC3.5□□□□□ -1.85
NUP43Q8NFH3 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.5□□□□□ -1.85
NUP43Q8NFH3 AC024067.1-201ENST00000426199 223 ntBASIC3.5□□□□□ -1.85
NUP43Q8NFH3 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.5□□□□□ -1.85
NUP43Q8NFH3 AC012308.1-201ENST00000451232 178 ntBASIC3.5□□□□□ -1.85
NUP43Q8NFH3 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.5□□□□□ -1.85
NUP43Q8NFH3 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.5□□□□□ -1.85
NUP43Q8NFH3 AL121594.1-201ENST00000475906 575 ntBASIC3.5□□□□□ -1.85
NUP43Q8NFH3 SNORA70.14-201ENST00000516205 110 ntBASIC3.5□□□□□ -1.85
NUP43Q8NFH3 SCARNA14-201ENST00000516903 136 ntBASIC3.5□□□□□ -1.85
NUP43Q8NFH3 MIR5692C2-201ENST00000577959 77 ntBASIC3.5□□□□□ -1.85
NUP43Q8NFH3 HMGN2P15-201ENST00000585707 270 ntBASIC3.5□□□□□ -1.85
NUP43Q8NFH3 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.5□□□□□ -1.85
NUP43Q8NFH3 AC004467.1-201ENST00000615678 330 ntBASIC3.5□□□□□ -1.85
NUP43Q8NFH3 AL354798.1-201ENST00000622505 329 ntBASIC3.5□□□□□ -1.85
NUP43Q8NFH3 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.5□□□□□ -1.85
NUP43Q8NFH3 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.5□□□□□ -1.85
NUP43Q8NFH3 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NUP43Q8NFH3 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.5□□□□□ -1.85
NUP43Q8NFH3 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NUP43Q8NFH3 FAM35DP-201ENST00000323387 2712 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms