Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 RNA5SP50-201ENST00000363731 107 ntBASIC3.22□□□□□ -1.89
SIMC1Q8NDZ2 Y_RNA.785-201ENST00000384290 109 ntBASIC3.22□□□□□ -1.89
SIMC1Q8NDZ2 RNU6-166P-201ENST00000384371 107 ntBASIC3.22□□□□□ -1.89
SIMC1Q8NDZ2 MIR215-201ENST00000384858 110 ntBASIC3.22□□□□□ -1.89
SIMC1Q8NDZ2 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.22□□□□□ -1.89
SIMC1Q8NDZ2 MIR548H3-201ENST00000408771 118 ntBASIC3.22□□□□□ -1.89
SIMC1Q8NDZ2 RNU2-14P-201ENST00000411053 191 ntBASIC3.22□□□□□ -1.89
SIMC1Q8NDZ2 AC023141.4-201ENST00000412031 328 ntBASIC3.22□□□□□ -1.89
SIMC1Q8NDZ2 PIGPP3-201ENST00000425307 415 ntBASIC3.22□□□□□ -1.89
SIMC1Q8NDZ2 MTCO3P29-201ENST00000432119 779 ntBASIC3.22□□□□□ -1.89
SIMC1Q8NDZ2 AC004383.1-201ENST00000438135 289 ntBASIC3.22□□□□□ -1.89
SIMC1Q8NDZ2 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.22□□□□□ -1.89
SIMC1Q8NDZ2 RBMY2UP-201ENST00000453474 324 ntBASIC3.22□□□□□ -1.89
SIMC1Q8NDZ2 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.22□□□□□ -1.89
SIMC1Q8NDZ2 AC021205.2-201ENST00000480069 347 ntBASIC3.22□□□□□ -1.89
SIMC1Q8NDZ2 AC010469.2-201ENST00000496412 480 ntBASIC3.22□□□□□ -1.89
SIMC1Q8NDZ2 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.22□□□□□ -1.89
SIMC1Q8NDZ2 RNA5SP385-201ENST00000515947 110 ntBASIC3.22□□□□□ -1.89
SIMC1Q8NDZ2 SNORA64.4-201ENST00000516632 81 ntBASIC3.22□□□□□ -1.89
SIMC1Q8NDZ2 RNU6-612P-201ENST00000516909 102 ntBASIC3.22□□□□□ -1.89
SIMC1Q8NDZ2 RN7SKP57-201ENST00000517248 293 ntBASIC3.22□□□□□ -1.89
SIMC1Q8NDZ2 AL590705.4-201ENST00000532209 134 ntBASIC3.22□□□□□ -1.89
SIMC1Q8NDZ2 AC008121.1-201ENST00000603244 268 ntBASIC3.22□□□□□ -1.89
SIMC1Q8NDZ2 AC009779.6-201ENST00000603972 165 ntBASIC3.22□□□□□ -1.89
SIMC1Q8NDZ2 MIR6134-201ENST00000617606 109 ntBASIC3.22□□□□□ -1.89
SIMC1Q8NDZ2 AC137590.2-201ENST00000619709 240 ntBASIC3.22□□□□□ -1.89
SIMC1Q8NDZ2 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SIMC1Q8NDZ2 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SIMC1Q8NDZ2 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
SIMC1Q8NDZ2 AC010889.1-201ENST00000566193 2666 ntBASIC3.21□□□□□ -1.9
SIMC1Q8NDZ2 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SIMC1Q8NDZ2 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SIMC1Q8NDZ2 AC008264.2-201ENST00000610193 3731 ntBASIC3.21□□□□□ -1.9
SIMC1Q8NDZ2 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.21□□□□□ -1.9
SIMC1Q8NDZ2 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
SIMC1Q8NDZ2 RNU6-428P-201ENST00000362942 107 ntBASIC3.21□□□□□ -1.9
SIMC1Q8NDZ2 Y_RNA.237-201ENST00000364439 102 ntBASIC3.21□□□□□ -1.9
SIMC1Q8NDZ2 RNU6-1280P-201ENST00000365211 107 ntBASIC3.21□□□□□ -1.9
SIMC1Q8NDZ2 Y_RNA.500-201ENST00000384466 111 ntBASIC3.21□□□□□ -1.9
SIMC1Q8NDZ2 MIR10A-201ENST00000385043 110 ntBASIC3.21□□□□□ -1.9
SIMC1Q8NDZ2 RNU2-49P-201ENST00000410666 184 ntBASIC3.21□□□□□ -1.9
SIMC1Q8NDZ2 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.21□□□□□ -1.9
SIMC1Q8NDZ2 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SIMC1Q8NDZ2 SDAD1P3-201ENST00000427380 333 ntBASIC3.21□□□□□ -1.9
SIMC1Q8NDZ2 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.21□□□□□ -1.9
SIMC1Q8NDZ2 AC013470.1-201ENST00000453438 462 ntBASIC3.21□□□□□ -1.9
SIMC1Q8NDZ2 BX510359.1-201ENST00000456973 237 ntBASIC3.21□□□□□ -1.9
SIMC1Q8NDZ2 RPS29P27-201ENST00000463711 170 ntBASIC3.21□□□□□ -1.9
SIMC1Q8NDZ2 RPL27AP5-201ENST00000469428 449 ntBASIC3.21□□□□□ -1.9
SIMC1Q8NDZ2 AK3P2-201ENST00000507976 429 ntBASIC3.21□□□□□ -1.9
SIMC1Q8NDZ2 AC067942.3-201ENST00000512025 362 ntBASIC3.21□□□□□ -1.9
SIMC1Q8NDZ2 MIR2276-201ENST00000516886 89 ntBASIC3.21□□□□□ -1.9
SIMC1Q8NDZ2 RNU6-182P-201ENST00000516970 105 ntBASIC3.21□□□□□ -1.9
SIMC1Q8NDZ2 IGKV2-26-201ENST00000518305 343 ntBASIC3.21□□□□□ -1.9
SIMC1Q8NDZ2 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.21□□□□□ -1.9
SIMC1Q8NDZ2 AC006199.1-201ENST00000548728 219 ntBASIC3.21□□□□□ -1.9
SIMC1Q8NDZ2 CYCSP39-201ENST00000565821 309 ntBASIC3.21□□□□□ -1.9
SIMC1Q8NDZ2 AC008739.2-201ENST00000597006 317 ntBASIC3.21□□□□□ -1.9
SIMC1Q8NDZ2 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.21□□□□□ -1.9
SIMC1Q8NDZ2 AC090617.7-201ENST00000623952 126 ntBASIC3.21□□□□□ -1.9
SIMC1Q8NDZ2 AC243829.7-201ENST00000633081 225 ntBASIC3.21□□□□□ -1.9
SIMC1Q8NDZ2 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
SIMC1Q8NDZ2 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SIMC1Q8NDZ2 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SIMC1Q8NDZ2 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.21□□□□□ -1.9
SIMC1Q8NDZ2 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
SIMC1Q8NDZ2 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SIMC1Q8NDZ2 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.2□□□□□ -1.9
SIMC1Q8NDZ2 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.2□□□□□ -1.9
SIMC1Q8NDZ2 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
SIMC1Q8NDZ2 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SIMC1Q8NDZ2 MIR335-201ENST00000362173 94 ntBASIC3.2□□□□□ -1.9
SIMC1Q8NDZ2 snoU2_19.2-201ENST00000363024 80 ntBASIC3.2□□□□□ -1.9
SIMC1Q8NDZ2 Y_RNA.462-201ENST00000384268 102 ntBASIC3.2□□□□□ -1.9
SIMC1Q8NDZ2 MIR190B-201ENST00000401119 79 ntBASIC3.2□□□□□ -1.9
SIMC1Q8NDZ2 MIR548M-201ENST00000408260 86 ntBASIC3.2□□□□□ -1.9
SIMC1Q8NDZ2 MIR1289-1-201ENST00000408836 144 ntBASIC3.2□□□□□ -1.9
SIMC1Q8NDZ2 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.2□□□□□ -1.9
SIMC1Q8NDZ2 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.2□□□□□ -1.9
SIMC1Q8NDZ2 AC096920.1-201ENST00000423991 241 ntBASIC3.2□□□□□ -1.9
SIMC1Q8NDZ2 AL161651.1-201ENST00000440882 223 ntBASIC3.2□□□□□ -1.9
SIMC1Q8NDZ2 AL357552.1-201ENST00000445254 415 ntBASIC3.2□□□□□ -1.9
SIMC1Q8NDZ2 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SIMC1Q8NDZ2 AL139109.1-201ENST00000455491 297 ntBASIC3.2□□□□□ -1.9
SIMC1Q8NDZ2 RN7SKP210-201ENST00000459176 261 ntBASIC3.2□□□□□ -1.9
SIMC1Q8NDZ2 SNORA81.3-201ENST00000517283 198 ntBASIC3.2□□□□□ -1.9
SIMC1Q8NDZ2 AC109479.2-201ENST00000517842 174 ntBASIC3.2□□□□□ -1.9
SIMC1Q8NDZ2 AC104027.1-201ENST00000521887 300 ntBASIC3.2□□□□□ -1.9
SIMC1Q8NDZ2 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.2□□□□□ -1.9
SIMC1Q8NDZ2 AL442163.3-201ENST00000554110 156 ntBASIC3.2□□□□□ -1.9
SIMC1Q8NDZ2 AC130289.1-201ENST00000577321 73 ntBASIC3.2□□□□□ -1.9
SIMC1Q8NDZ2 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.2□□□□□ -1.9
SIMC1Q8NDZ2 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.2□□□□□ -1.9
SIMC1Q8NDZ2 SCARNA4-202ENST00000625402 129 ntBASIC3.2□□□□□ -1.9
SIMC1Q8NDZ2 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.2□□□□□ -1.9
SIMC1Q8NDZ2 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.2□□□□□ -1.9
SIMC1Q8NDZ2 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.2□□□□□ -1.9
SIMC1Q8NDZ2 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.2□□□□□ -1.9
SIMC1Q8NDZ2 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SIMC1Q8NDZ2 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms