Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.3□□□□□ -2.36
TMEM35BQ8NCS4 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.3□□□□□ -2.36
TMEM35BQ8NCS4 Y_RNA.687-201ENST00000516558 91 ntBASIC0.3□□□□□ -2.36
TMEM35BQ8NCS4 RNU6-677P-201ENST00000516914 101 ntBASIC0.3□□□□□ -2.36
TMEM35BQ8NCS4 AC092451.2-201ENST00000538746 658 ntBASIC0.3□□□□□ -2.36
TMEM35BQ8NCS4 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.3□□□□□ -2.36
TMEM35BQ8NCS4 Z83818.1-201ENST00000603584 150 ntBASIC0.3□□□□□ -2.36
TMEM35BQ8NCS4 AL022154.1-201ENST00000604698 785 ntBASIC0.3□□□□□ -2.36
TMEM35BQ8NCS4 MIR15A-201ENST00000607334 83 ntBASIC0.3□□□□□ -2.36
TMEM35BQ8NCS4 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
TMEM35BQ8NCS4 RNU5A-8P-201ENST00000364102 114 ntBASIC0.29□□□□□ -2.36
TMEM35BQ8NCS4 RNU6-438P-201ENST00000365561 103 ntBASIC0.29□□□□□ -2.36
TMEM35BQ8NCS4 RNU6-468P-201ENST00000384003 109 ntBASIC0.29□□□□□ -2.36
TMEM35BQ8NCS4 SNORA32.2-201ENST00000384049 122 ntBASIC0.29□□□□□ -2.36
TMEM35BQ8NCS4 RNU6-278P-201ENST00000390945 109 ntBASIC0.29□□□□□ -2.36
TMEM35BQ8NCS4 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC0.29□□□□□ -2.36
TMEM35BQ8NCS4 AC011233.1-201ENST00000422812 283 ntBASIC0.29□□□□□ -2.36
TMEM35BQ8NCS4 MTND4P20-201ENST00000424125 869 ntBASIC0.29□□□□□ -2.36
TMEM35BQ8NCS4 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.29□□□□□ -2.36
TMEM35BQ8NCS4 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC0.29□□□□□ -2.36
TMEM35BQ8NCS4 AC006026.2-201ENST00000457376 180 ntBASIC0.29□□□□□ -2.36
TMEM35BQ8NCS4 RNU7-34P-201ENST00000459394 64 ntBASIC0.29□□□□□ -2.36
TMEM35BQ8NCS4 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.29□□□□□ -2.36
TMEM35BQ8NCS4 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.29□□□□□ -2.36
TMEM35BQ8NCS4 AL512347.1-201ENST00000566420 503 ntBASIC0.29□□□□□ -2.36
TMEM35BQ8NCS4 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.29□□□□□ -2.36
TMEM35BQ8NCS4 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.29□□□□□ -2.36
TMEM35BQ8NCS4 AL353778.1-201ENST00000603149 408 ntBASIC0.29□□□□□ -2.36
TMEM35BQ8NCS4 AL138889.2-201ENST00000603883 242 ntBASIC0.29□□□□□ -2.36
TMEM35BQ8NCS4 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.29□□□□□ -2.36
TMEM35BQ8NCS4 AL589743.1-201ENST00000551932 2712 ntBASIC0.28□□□□□ -2.36
TMEM35BQ8NCS4 SMIM11P1-201ENST00000369586 178 ntBASIC0.28□□□□□ -2.36
TMEM35BQ8NCS4 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.28□□□□□ -2.36
TMEM35BQ8NCS4 MTCO1P17-201ENST00000411522 491 ntBASIC0.28□□□□□ -2.36
TMEM35BQ8NCS4 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.28□□□□□ -2.36
TMEM35BQ8NCS4 SUMO2P16-201ENST00000519475 264 ntBASIC0.28□□□□□ -2.36
TMEM35BQ8NCS4 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.28□□□□□ -2.36
TMEM35BQ8NCS4 SNORA59B-202ENST00000578183 701 ntBASIC0.28□□□□□ -2.36
TMEM35BQ8NCS4 VN1R87P-201ENST00000596706 487 ntBASIC0.28□□□□□ -2.36
TMEM35BQ8NCS4 AC112191.3-201ENST00000604371 277 ntBASIC0.28□□□□□ -2.36
TMEM35BQ8NCS4 AC006270.3-201ENST00000605967 1036 ntBASIC0.28□□□□□ -2.36
TMEM35BQ8NCS4 AC124016.2-201ENST00000610058 665 ntBASIC0.28□□□□□ -2.36
TMEM35BQ8NCS4 RNU6-534P-201ENST00000364877 106 ntBASIC0.27□□□□□ -2.37
TMEM35BQ8NCS4 AC092809.3-201ENST00000415453 231 ntBASIC0.27□□□□□ -2.37
TMEM35BQ8NCS4 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.27□□□□□ -2.37
TMEM35BQ8NCS4 RPL23AP95-201ENST00000426806 265 ntBASIC0.27□□□□□ -2.37
TMEM35BQ8NCS4 AC092423.1-201ENST00000430165 186 ntBASIC0.27□□□□□ -2.37
TMEM35BQ8NCS4 AL035398.1-201ENST00000430869 322 ntBASIC0.27□□□□□ -2.37
TMEM35BQ8NCS4 AL445305.1-201ENST00000432577 575 ntBASIC0.27□□□□□ -2.37
TMEM35BQ8NCS4 AC007969.2-201ENST00000441891 191 ntBASIC0.27□□□□□ -2.37
TMEM35BQ8NCS4 GAPDHP17-201ENST00000449858 1001 ntBASIC0.27□□□□□ -2.37
TMEM35BQ8NCS4 HESX1-202ENST00000473921 757 ntTSL 5 BASIC0.27□□□□□ -2.37
TMEM35BQ8NCS4 AC119751.4-201ENST00000507498 357 ntBASIC0.27□□□□□ -2.37
TMEM35BQ8NCS4 MIR3136-201ENST00000583498 78 ntBASIC0.27□□□□□ -2.37
TMEM35BQ8NCS4 AL034555.1-201ENST00000604816 211 ntBASIC0.27□□□□□ -2.37
TMEM35BQ8NCS4 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
TMEM35BQ8NCS4 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.26□□□□□ -2.37
TMEM35BQ8NCS4 MTCO2P1-201ENST00000424648 477 ntBASIC0.26□□□□□ -2.37
TMEM35BQ8NCS4 MTCYBP42-201ENST00000444653 1130 ntBASIC0.26□□□□□ -2.37
TMEM35BQ8NCS4 AC093899.1-201ENST00000457984 376 ntBASIC0.26□□□□□ -2.37
TMEM35BQ8NCS4 AC002350.1-201ENST00000490759 375 ntBASIC0.26□□□□□ -2.37
TMEM35BQ8NCS4 RNA5SP134-201ENST00000516492 96 ntBASIC0.26□□□□□ -2.37
TMEM35BQ8NCS4 AP003355.1-201ENST00000518956 587 ntBASIC0.26□□□□□ -2.37
TMEM35BQ8NCS4 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.26□□□□□ -2.37
TMEM35BQ8NCS4 APOOP3-201ENST00000536787 586 ntBASIC0.26□□□□□ -2.37
TMEM35BQ8NCS4 MIR3146-201ENST00000580367 79 ntBASIC0.26□□□□□ -2.37
TMEM35BQ8NCS4 MIR4742-201ENST00000581069 85 ntBASIC0.26□□□□□ -2.37
TMEM35BQ8NCS4 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.26□□□□□ -2.37
TMEM35BQ8NCS4 AC021506.2-201ENST00000612354 169 ntBASIC0.26□□□□□ -2.37
TMEM35BQ8NCS4 SNORD3E-202ENST00000627253 216 ntBASIC0.26□□□□□ -2.37
TMEM35BQ8NCS4 RNU6-236P-201ENST00000363886 106 ntBASIC0.25□□□□□ -2.37
TMEM35BQ8NCS4 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
TMEM35BQ8NCS4 SNORA80D-201ENST00000384488 135 ntBASIC0.25□□□□□ -2.37
TMEM35BQ8NCS4 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
TMEM35BQ8NCS4 RPS3AP36-201ENST00000398190 775 ntBASIC0.25□□□□□ -2.37
TMEM35BQ8NCS4 AC010531.2-201ENST00000465012 153 ntBASIC0.25□□□□□ -2.37
TMEM35BQ8NCS4 RPS26P48-201ENST00000491713 339 ntBASIC0.25□□□□□ -2.37
TMEM35BQ8NCS4 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.25□□□□□ -2.37
TMEM35BQ8NCS4 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.25□□□□□ -2.37
TMEM35BQ8NCS4 AC024940.5-201ENST00000622889 474 ntBASIC0.25□□□□□ -2.37
TMEM35BQ8NCS4 NDUFA5P4-201ENST00000436704 385 ntBASIC0.24□□□□□ -2.37
TMEM35BQ8NCS4 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.24□□□□□ -2.37
TMEM35BQ8NCS4 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.24□□□□□ -2.37
TMEM35BQ8NCS4 AC092991.1-201ENST00000477176 376 ntBASIC0.24□□□□□ -2.37
TMEM35BQ8NCS4 AC091435.1-201ENST00000505442 584 ntBASIC0.24□□□□□ -2.37
TMEM35BQ8NCS4 AC112206.3-201ENST00000514578 389 ntBASIC0.24□□□□□ -2.37
TMEM35BQ8NCS4 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
TMEM35BQ8NCS4 RNU6-1041P-201ENST00000516254 102 ntBASIC0.24□□□□□ -2.37
TMEM35BQ8NCS4 AC115990.1-201ENST00000526957 301 ntBASIC0.24□□□□□ -2.37
TMEM35BQ8NCS4 MIR5695-201ENST00000579717 85 ntBASIC0.24□□□□□ -2.37
TMEM35BQ8NCS4 AL031281.1-201ENST00000604049 488 ntBASIC0.24□□□□□ -2.37
TMEM35BQ8NCS4 AL353149.1-201ENST00000610667 244 ntBASIC0.24□□□□□ -2.37
TMEM35BQ8NCS4 AC008147.4-201ENST00000617570 1204 ntBASIC0.24□□□□□ -2.37
TMEM35BQ8NCS4 MIR6515-201ENST00000619843 57 ntBASIC0.24□□□□□ -2.37
TMEM35BQ8NCS4 Y_RNA.122-201ENST00000363331 96 ntBASIC0.23□□□□□ -2.37
TMEM35BQ8NCS4 RNU6-190P-201ENST00000384154 102 ntBASIC0.23□□□□□ -2.37
TMEM35BQ8NCS4 AL596276.1-201ENST00000434465 418 ntBASIC0.23□□□□□ -2.37
TMEM35BQ8NCS4 AC016925.1-201ENST00000458303 298 ntBASIC0.23□□□□□ -2.37
TMEM35BQ8NCS4 AC113410.1-201ENST00000505029 247 ntBASIC0.23□□□□□ -2.37
TMEM35BQ8NCS4 AC105758.1-201ENST00000506038 399 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms