Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TTC9BQ8N6N2 RNU6-1074P-201ENST00000383995 104 ntBASIC3.46□□□□□ -1.86
TTC9BQ8N6N2 RNU6-629P-201ENST00000384061 103 ntBASIC3.46□□□□□ -1.86
TTC9BQ8N6N2 RNU6-968P-201ENST00000384076 107 ntBASIC3.46□□□□□ -1.86
TTC9BQ8N6N2 Y_RNA.488-201ENST00000384403 102 ntBASIC3.46□□□□□ -1.86
TTC9BQ8N6N2 SNORA48.5-201ENST00000391143 135 ntBASIC3.46□□□□□ -1.86
TTC9BQ8N6N2 BTF3L4P2-201ENST00000392798 346 ntBASIC3.46□□□□□ -1.86
TTC9BQ8N6N2 Z98941.1-201ENST00000407764 100 ntBASIC3.46□□□□□ -1.86
TTC9BQ8N6N2 RHEBP3-201ENST00000411920 351 ntBASIC3.46□□□□□ -1.86
TTC9BQ8N6N2 AL159169.1-201ENST00000421119 127 ntBASIC3.46□□□□□ -1.86
TTC9BQ8N6N2 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.46□□□□□ -1.86
TTC9BQ8N6N2 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.46□□□□□ -1.86
TTC9BQ8N6N2 AL353705.4-201ENST00000449661 238 ntBASIC3.46□□□□□ -1.86
TTC9BQ8N6N2 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.46□□□□□ -1.86
TTC9BQ8N6N2 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.46□□□□□ -1.86
TTC9BQ8N6N2 AC087588.1-201ENST00000462203 316 ntBASIC3.46□□□□□ -1.86
TTC9BQ8N6N2 SNRPGP3-201ENST00000469405 227 ntBASIC3.46□□□□□ -1.86
TTC9BQ8N6N2 AC139453.3-201ENST00000493276 369 ntBASIC3.46□□□□□ -1.86
TTC9BQ8N6N2 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.46□□□□□ -1.86
TTC9BQ8N6N2 SNORA31.20-201ENST00000517111 133 ntBASIC3.46□□□□□ -1.86
TTC9BQ8N6N2 AL121603.1-201ENST00000553815 142 ntBASIC3.46□□□□□ -1.86
TTC9BQ8N6N2 MIR3690-201ENST00000580266 75 ntBASIC3.46□□□□□ -1.86
TTC9BQ8N6N2 SNORD84-203ENST00000584275 78 ntBASIC3.46□□□□□ -1.86
TTC9BQ8N6N2 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.46□□□□□ -1.86
TTC9BQ8N6N2 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.46□□□□□ -1.86
TTC9BQ8N6N2 MTND1P7-201ENST00000632801 297 ntBASIC3.46□□□□□ -1.86
TTC9BQ8N6N2 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.46□□□□□ -1.86
TTC9BQ8N6N2 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
TTC9BQ8N6N2 AC009812.4-201ENST00000569134 1805 ntBASIC3.46□□□□□ -1.86
TTC9BQ8N6N2 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
TTC9BQ8N6N2 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.46□□□□□ -1.86
TTC9BQ8N6N2 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
TTC9BQ8N6N2 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.45□□□□□ -1.86
TTC9BQ8N6N2 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.45□□□□□ -1.86
TTC9BQ8N6N2 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
TTC9BQ8N6N2 Y_RNA.261-201ENST00000364631 102 ntBASIC3.45□□□□□ -1.86
TTC9BQ8N6N2 RNU5E-7P-201ENST00000365290 117 ntBASIC3.45□□□□□ -1.86
TTC9BQ8N6N2 Y_RNA.568-201ENST00000384742 113 ntBASIC3.45□□□□□ -1.86
TTC9BQ8N6N2 NDUFB4P4-201ENST00000404822 243 ntBASIC3.45□□□□□ -1.86
TTC9BQ8N6N2 Y_RNA.597-201ENST00000410463 100 ntBASIC3.45□□□□□ -1.86
TTC9BQ8N6N2 AL627311.1-201ENST00000431514 115 ntBASIC3.45□□□□□ -1.86
TTC9BQ8N6N2 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.45□□□□□ -1.86
TTC9BQ8N6N2 AL512844.2-201ENST00000433990 593 ntBASIC3.45□□□□□ -1.86
TTC9BQ8N6N2 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.45□□□□□ -1.86
TTC9BQ8N6N2 UQCRBP2-201ENST00000447827 297 ntBASIC3.45□□□□□ -1.86
TTC9BQ8N6N2 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.45□□□□□ -1.86
TTC9BQ8N6N2 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.45□□□□□ -1.86
TTC9BQ8N6N2 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.45□□□□□ -1.86
TTC9BQ8N6N2 MIR2276-201ENST00000516886 89 ntBASIC3.45□□□□□ -1.86
TTC9BQ8N6N2 SNORA31.19-201ENST00000517079 126 ntBASIC3.45□□□□□ -1.86
TTC9BQ8N6N2 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
TTC9BQ8N6N2 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.45□□□□□ -1.86
TTC9BQ8N6N2 AC073349.3-201ENST00000617616 186 ntBASIC3.45□□□□□ -1.86
TTC9BQ8N6N2 AL353743.1-202ENST00000431724 1695 ntBASIC3.45□□□□□ -1.86
TTC9BQ8N6N2 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TTC9BQ8N6N2 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TTC9BQ8N6N2 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TTC9BQ8N6N2 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
TTC9BQ8N6N2 ZNF826P-207ENST00000622273 1910 ntBASIC3.44□□□□□ -1.86
TTC9BQ8N6N2 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.44□□□□□ -1.86
TTC9BQ8N6N2 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TTC9BQ8N6N2 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
TTC9BQ8N6N2 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.44□□□□□ -1.86
TTC9BQ8N6N2 MIR410-201ENST00000362222 80 ntBASIC3.44□□□□□ -1.86
TTC9BQ8N6N2 RNU6-50P-201ENST00000362356 103 ntBASIC3.44□□□□□ -1.86
TTC9BQ8N6N2 RNU4-56P-201ENST00000364700 142 ntBASIC3.44□□□□□ -1.86
TTC9BQ8N6N2 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.44□□□□□ -1.86
TTC9BQ8N6N2 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.44□□□□□ -1.86
TTC9BQ8N6N2 RNU6-20P-201ENST00000384106 107 ntBASIC3.44□□□□□ -1.86
TTC9BQ8N6N2 MIR514A1-201ENST00000385133 98 ntBASIC3.44□□□□□ -1.86
TTC9BQ8N6N2 Y_RNA.586-201ENST00000391146 98 ntBASIC3.44□□□□□ -1.86
TTC9BQ8N6N2 RNA5SP229-201ENST00000410809 99 ntBASIC3.44□□□□□ -1.86
TTC9BQ8N6N2 RNU5A-5P-201ENST00000411054 116 ntBASIC3.44□□□□□ -1.86
TTC9BQ8N6N2 OOSP1P1-201ENST00000423265 274 ntBASIC3.44□□□□□ -1.86
TTC9BQ8N6N2 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.44□□□□□ -1.86
TTC9BQ8N6N2 AC007919.1-201ENST00000429380 217 ntBASIC3.44□□□□□ -1.86
TTC9BQ8N6N2 POLR2KP2-201ENST00000438155 177 ntBASIC3.44□□□□□ -1.86
TTC9BQ8N6N2 AC006028.1-201ENST00000438379 402 ntBASIC3.44□□□□□ -1.86
TTC9BQ8N6N2 RPL23AP62-201ENST00000463396 453 ntBASIC3.44□□□□□ -1.86
TTC9BQ8N6N2 RPL23AP75-201ENST00000491601 451 ntBASIC3.44□□□□□ -1.86
TTC9BQ8N6N2 HMGB3P3-201ENST00000510526 400 ntBASIC3.44□□□□□ -1.86
TTC9BQ8N6N2 SNORD116-25-201ENST00000516517 92 ntBASIC3.44□□□□□ -1.86
TTC9BQ8N6N2 SNORA27.4-201ENST00000516650 95 ntBASIC3.44□□□□□ -1.86
TTC9BQ8N6N2 RNU6-567P-201ENST00000516746 107 ntBASIC3.44□□□□□ -1.86
TTC9BQ8N6N2 AC107934.2-201ENST00000518653 310 ntBASIC3.44□□□□□ -1.86
TTC9BQ8N6N2 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.44□□□□□ -1.86
TTC9BQ8N6N2 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.44□□□□□ -1.86
TTC9BQ8N6N2 MIR5695-201ENST00000579717 85 ntBASIC3.44□□□□□ -1.86
TTC9BQ8N6N2 RPL23AP88-201ENST00000605759 454 ntBASIC3.44□□□□□ -1.86
TTC9BQ8N6N2 AC006001.4-201ENST00000622243 395 ntBASIC3.44□□□□□ -1.86
TTC9BQ8N6N2 AC244205.2-202ENST00000635781 342 ntBASIC3.44□□□□□ -1.86
TTC9BQ8N6N2 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TTC9BQ8N6N2 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
TTC9BQ8N6N2 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.43□□□□□ -1.86
TTC9BQ8N6N2 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.43□□□□□ -1.86
TTC9BQ8N6N2 RNU6-626P-201ENST00000363354 107 ntBASIC3.43□□□□□ -1.86
TTC9BQ8N6N2 RNU6-961P-201ENST00000363893 105 ntBASIC3.43□□□□□ -1.86
TTC9BQ8N6N2 RNU6-1175P-201ENST00000365200 107 ntBASIC3.43□□□□□ -1.86
TTC9BQ8N6N2 Y_RNA.331-201ENST00000365267 102 ntBASIC3.43□□□□□ -1.86
TTC9BQ8N6N2 RNU6-449P-201ENST00000383914 107 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 187.1 ms