Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.84□□□□□ -2.11
C9orf40Q8IXQ3 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.84□□□□□ -2.11
C9orf40Q8IXQ3 AC115990.1-201ENST00000526957 301 ntBASIC1.84□□□□□ -2.11
C9orf40Q8IXQ3 AP000763.2-201ENST00000540641 163 ntBASIC1.84□□□□□ -2.11
C9orf40Q8IXQ3 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.84□□□□□ -2.11
C9orf40Q8IXQ3 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.84□□□□□ -2.11
C9orf40Q8IXQ3 MIR5089-201ENST00000580047 84 ntBASIC1.84□□□□□ -2.11
C9orf40Q8IXQ3 BNIP3P25-201ENST00000596023 559 ntBASIC1.84□□□□□ -2.11
C9orf40Q8IXQ3 SNRPGP19-201ENST00000603826 189 ntBASIC1.84□□□□□ -2.11
C9orf40Q8IXQ3 SNORD14A-201ENST00000606526 91 ntBASIC1.84□□□□□ -2.11
C9orf40Q8IXQ3 AC116312.1-201ENST00000606841 314 ntBASIC1.84□□□□□ -2.11
C9orf40Q8IXQ3 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.84□□□□□ -2.11
C9orf40Q8IXQ3 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
C9orf40Q8IXQ3 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
C9orf40Q8IXQ3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
C9orf40Q8IXQ3 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.83□□□□□ -2.12
C9orf40Q8IXQ3 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
C9orf40Q8IXQ3 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
C9orf40Q8IXQ3 ZNF355P-201ENST00000427301 3216 ntBASIC1.83□□□□□ -2.12
C9orf40Q8IXQ3 Y_RNA.6-201ENST00000362350 114 ntBASIC1.83□□□□□ -2.12
C9orf40Q8IXQ3 RNU1-23P-201ENST00000363361 144 ntBASIC1.83□□□□□ -2.12
C9orf40Q8IXQ3 RNU6-1141P-201ENST00000364520 107 ntBASIC1.83□□□□□ -2.12
C9orf40Q8IXQ3 Y_RNA.256-201ENST00000364594 104 ntBASIC1.83□□□□□ -2.12
C9orf40Q8IXQ3 Y_RNA.373-201ENST00000365600 103 ntBASIC1.83□□□□□ -2.12
C9orf40Q8IXQ3 RNU1-148P-201ENST00000384472 162 ntBASIC1.83□□□□□ -2.12
C9orf40Q8IXQ3 RNU6-1274P-201ENST00000384557 107 ntBASIC1.83□□□□□ -2.12
C9orf40Q8IXQ3 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.83□□□□□ -2.12
C9orf40Q8IXQ3 SRIP2-201ENST00000428470 166 ntBASIC1.83□□□□□ -2.12
C9orf40Q8IXQ3 MRPS10P2-201ENST00000431226 381 ntBASIC1.83□□□□□ -2.12
C9orf40Q8IXQ3 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.83□□□□□ -2.12
C9orf40Q8IXQ3 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.83□□□□□ -2.12
C9orf40Q8IXQ3 AL139109.1-201ENST00000455491 297 ntBASIC1.83□□□□□ -2.12
C9orf40Q8IXQ3 RNU6-717P-201ENST00000459076 104 ntBASIC1.83□□□□□ -2.12
C9orf40Q8IXQ3 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.83□□□□□ -2.12
C9orf40Q8IXQ3 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.83□□□□□ -2.12
C9orf40Q8IXQ3 RNU5F-2P-201ENST00000516066 82 ntBASIC1.83□□□□□ -2.12
C9orf40Q8IXQ3 Y_RNA.665-201ENST00000516177 98 ntBASIC1.83□□□□□ -2.12
C9orf40Q8IXQ3 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.83□□□□□ -2.12
C9orf40Q8IXQ3 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.83□□□□□ -2.12
C9orf40Q8IXQ3 AC068790.6-201ENST00000602558 258 ntBASIC1.83□□□□□ -2.12
C9orf40Q8IXQ3 AC245884.12-201ENST00000615364 59 ntBASIC1.83□□□□□ -2.12
C9orf40Q8IXQ3 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
C9orf40Q8IXQ3 AL359851.1-201ENST00000569460 4997 ntBASIC1.83□□□□□ -2.12
C9orf40Q8IXQ3 RNA5SP138-201ENST00000365098 114 ntBASIC1.82□□□□□ -2.12
C9orf40Q8IXQ3 MIR29B2-201ENST00000385055 81 ntBASIC1.82□□□□□ -2.12
C9orf40Q8IXQ3 MIR548F1-201ENST00000408667 84 ntBASIC1.82□□□□□ -2.12
C9orf40Q8IXQ3 Y_RNA.615-201ENST00000410769 117 ntBASIC1.82□□□□□ -2.12
C9orf40Q8IXQ3 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.82□□□□□ -2.12
C9orf40Q8IXQ3 AL121890.1-201ENST00000435457 205 ntBASIC1.82□□□□□ -2.12
C9orf40Q8IXQ3 AL359672.1-201ENST00000442302 409 ntBASIC1.82□□□□□ -2.12
C9orf40Q8IXQ3 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.82□□□□□ -2.12
C9orf40Q8IXQ3 snoU13.15-201ENST00000459407 104 ntBASIC1.82□□□□□ -2.12
C9orf40Q8IXQ3 RNU6-1037P-201ENST00000459571 107 ntBASIC1.82□□□□□ -2.12
C9orf40Q8IXQ3 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.82□□□□□ -2.12
C9orf40Q8IXQ3 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.82□□□□□ -2.12
C9orf40Q8IXQ3 RN7SKP256-201ENST00000517201 314 ntBASIC1.82□□□□□ -2.12
C9orf40Q8IXQ3 MTND1P5-201ENST00000517906 940 ntBASIC1.82□□□□□ -2.12
C9orf40Q8IXQ3 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.82□□□□□ -2.12
C9orf40Q8IXQ3 AC104576.1-201ENST00000524225 88 ntBASIC1.82□□□□□ -2.12
C9orf40Q8IXQ3 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.82□□□□□ -2.12
C9orf40Q8IXQ3 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.82□□□□□ -2.12
C9orf40Q8IXQ3 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.82□□□□□ -2.12
C9orf40Q8IXQ3 MIR3935-201ENST00000583472 104 ntBASIC1.82□□□□□ -2.12
C9orf40Q8IXQ3 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.82□□□□□ -2.12
C9orf40Q8IXQ3 AL356157.2-201ENST00000605122 111 ntBASIC1.82□□□□□ -2.12
C9orf40Q8IXQ3 AC064836.2-201ENST00000609491 462 ntBASIC1.82□□□□□ -2.12
C9orf40Q8IXQ3 AC024614.3-201ENST00000637860 256 ntBASIC1.82□□□□□ -2.12
C9orf40Q8IXQ3 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.82□□□□□ -2.12
C9orf40Q8IXQ3 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
C9orf40Q8IXQ3 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
C9orf40Q8IXQ3 Y_RNA.89-201ENST00000363031 102 ntBASIC1.81□□□□□ -2.12
C9orf40Q8IXQ3 SNORD32A-201ENST00000364805 84 ntBASIC1.81□□□□□ -2.12
C9orf40Q8IXQ3 SNORA25B-201ENST00000365507 128 ntBASIC1.81□□□□□ -2.12
C9orf40Q8IXQ3 RNU6-1329P-201ENST00000365664 107 ntBASIC1.81□□□□□ -2.12
C9orf40Q8IXQ3 Y_RNA.573-201ENST00000384763 105 ntBASIC1.81□□□□□ -2.12
C9orf40Q8IXQ3 SNORD115-47-201ENST00000391226 86 ntBASIC1.81□□□□□ -2.12
C9orf40Q8IXQ3 MIR450B-201ENST00000401182 78 ntBASIC1.81□□□□□ -2.12
C9orf40Q8IXQ3 SNRPEP10-201ENST00000420249 274 ntBASIC1.81□□□□□ -2.12
C9orf40Q8IXQ3 USP9YP18-201ENST00000425912 695 ntBASIC1.81□□□□□ -2.12
C9orf40Q8IXQ3 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.81□□□□□ -2.12
C9orf40Q8IXQ3 AC244670.1-201ENST00000436879 112 ntBASIC1.81□□□□□ -2.12
C9orf40Q8IXQ3 AC010095.1-201ENST00000443543 144 ntBASIC1.81□□□□□ -2.12
C9orf40Q8IXQ3 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.81□□□□□ -2.12
C9orf40Q8IXQ3 HMGN2P26-201ENST00000463169 339 ntBASIC1.81□□□□□ -2.12
C9orf40Q8IXQ3 AC008628.2-201ENST00000502605 298 ntBASIC1.81□□□□□ -2.12
C9orf40Q8IXQ3 HMGB1P35-201ENST00000503360 598 ntBASIC1.81□□□□□ -2.12
C9orf40Q8IXQ3 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.81□□□□□ -2.12
C9orf40Q8IXQ3 YWHAEP4-201ENST00000505390 198 ntBASIC1.81□□□□□ -2.12
C9orf40Q8IXQ3 RPL39P5-202ENST00000512505 151 ntBASIC1.81□□□□□ -2.12
C9orf40Q8IXQ3 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.81□□□□□ -2.12
C9orf40Q8IXQ3 RNU6-1332P-201ENST00000516666 104 ntBASIC1.81□□□□□ -2.12
C9orf40Q8IXQ3 MIR514B-201ENST00000516774 80 ntBASIC1.81□□□□□ -2.12
C9orf40Q8IXQ3 RNU1-40P-201ENST00000516816 164 ntBASIC1.81□□□□□ -2.12
C9orf40Q8IXQ3 RNU1-97P-201ENST00000516872 164 ntBASIC1.81□□□□□ -2.12
C9orf40Q8IXQ3 CYCSP26-201ENST00000534107 320 ntBASIC1.81□□□□□ -2.12
C9orf40Q8IXQ3 HSPE1P4-201ENST00000550617 308 ntBASIC1.81□□□□□ -2.12
C9orf40Q8IXQ3 RPS3AP23-202ENST00000574601 686 ntBASIC1.81□□□□□ -2.12
C9orf40Q8IXQ3 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.81□□□□□ -2.12
C9orf40Q8IXQ3 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.81□□□□□ -2.12
C9orf40Q8IXQ3 AP001836.1-201ENST00000604675 523 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms