Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
UBE3DQ7Z6J8 IPO8P1-201ENST00000455509 3109 ntBASIC3.72□□□□□ -1.81
UBE3DQ7Z6J8 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.72□□□□□ -1.81
UBE3DQ7Z6J8 AC002546.1-201ENST00000588041 2504 ntBASIC3.72□□□□□ -1.81
UBE3DQ7Z6J8 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.71□□□□□ -1.82
UBE3DQ7Z6J8 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
UBE3DQ7Z6J8 Y_RNA.488-201ENST00000384403 102 ntBASIC3.71□□□□□ -1.82
UBE3DQ7Z6J8 RN7SKP177-201ENST00000410567 355 ntBASIC3.71□□□□□ -1.82
UBE3DQ7Z6J8 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.71□□□□□ -1.82
UBE3DQ7Z6J8 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.71□□□□□ -1.82
UBE3DQ7Z6J8 AC012493.2-201ENST00000595083 291 ntBASIC3.71□□□□□ -1.82
UBE3DQ7Z6J8 AC110741.2-201ENST00000605278 268 ntBASIC3.71□□□□□ -1.82
UBE3DQ7Z6J8 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.71□□□□□ -1.82
UBE3DQ7Z6J8 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
UBE3DQ7Z6J8 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
UBE3DQ7Z6J8 AC018555.1-201ENST00000567548 1980 ntBASIC3.71□□□□□ -1.82
UBE3DQ7Z6J8 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.82
UBE3DQ7Z6J8 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
UBE3DQ7Z6J8 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
UBE3DQ7Z6J8 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
UBE3DQ7Z6J8 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
UBE3DQ7Z6J8 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
UBE3DQ7Z6J8 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
UBE3DQ7Z6J8 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.7□□□□□ -1.82
UBE3DQ7Z6J8 Y_RNA.497-201ENST00000384447 98 ntBASIC3.7□□□□□ -1.82
UBE3DQ7Z6J8 RNU6-959P-201ENST00000384671 107 ntBASIC3.7□□□□□ -1.82
UBE3DQ7Z6J8 AL138878.1-201ENST00000405131 347 ntBASIC3.7□□□□□ -1.82
UBE3DQ7Z6J8 RNA5SP201-201ENST00000410316 124 ntBASIC3.7□□□□□ -1.82
UBE3DQ7Z6J8 RNU6-710P-201ENST00000410424 105 ntBASIC3.7□□□□□ -1.82
UBE3DQ7Z6J8 AL162725.1-201ENST00000435405 301 ntBASIC3.7□□□□□ -1.82
UBE3DQ7Z6J8 RPS15AP5-201ENST00000436276 388 ntBASIC3.7□□□□□ -1.82
UBE3DQ7Z6J8 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.7□□□□□ -1.82
UBE3DQ7Z6J8 AP002884.2-201ENST00000471647 395 ntBASIC3.7□□□□□ -1.82
UBE3DQ7Z6J8 PPIAP15-201ENST00000479662 484 ntBASIC3.7□□□□□ -1.82
UBE3DQ7Z6J8 AC103975.1-201ENST00000482506 483 ntBASIC3.7□□□□□ -1.82
UBE3DQ7Z6J8 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.7□□□□□ -1.82
UBE3DQ7Z6J8 AC100767.1-201ENST00000528178 123 ntBASIC3.7□□□□□ -1.82
UBE3DQ7Z6J8 AP002001.1-203ENST00000534002 267 ntBASIC3.7□□□□□ -1.82
UBE3DQ7Z6J8 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.7□□□□□ -1.82
UBE3DQ7Z6J8 HMGN2P15-201ENST00000585707 270 ntBASIC3.7□□□□□ -1.82
UBE3DQ7Z6J8 RPS15AP11-201ENST00000594193 385 ntBASIC3.7□□□□□ -1.82
UBE3DQ7Z6J8 AC020914.4-201ENST00000597690 277 ntBASIC3.7□□□□□ -1.82
UBE3DQ7Z6J8 AC091152.3-201ENST00000604227 325 ntBASIC3.7□□□□□ -1.82
UBE3DQ7Z6J8 SNORD11B-201ENST00000607707 90 ntBASIC3.7□□□□□ -1.82
UBE3DQ7Z6J8 TCL6_2.1-201ENST00000615162 119 ntBASIC3.7□□□□□ -1.82
UBE3DQ7Z6J8 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.7□□□□□ -1.82
UBE3DQ7Z6J8 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
UBE3DQ7Z6J8 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
UBE3DQ7Z6J8 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
UBE3DQ7Z6J8 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
UBE3DQ7Z6J8 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
UBE3DQ7Z6J8 RNU6-103P-201ENST00000363686 107 ntBASIC3.69□□□□□ -1.82
UBE3DQ7Z6J8 RNU6-275P-201ENST00000364910 107 ntBASIC3.69□□□□□ -1.82
UBE3DQ7Z6J8 Y_RNA.329-201ENST00000365209 107 ntBASIC3.69□□□□□ -1.82
UBE3DQ7Z6J8 RNU6-1130P-201ENST00000365434 107 ntBASIC3.69□□□□□ -1.82
UBE3DQ7Z6J8 Y_RNA.412-201ENST00000384001 104 ntBASIC3.69□□□□□ -1.82
UBE3DQ7Z6J8 RNU6-22P-201ENST00000384355 107 ntBASIC3.69□□□□□ -1.82
UBE3DQ7Z6J8 RNU6-417P-201ENST00000384712 107 ntBASIC3.69□□□□□ -1.82
UBE3DQ7Z6J8 Y_RNA.568-201ENST00000384742 113 ntBASIC3.69□□□□□ -1.82
UBE3DQ7Z6J8 MIR199A2-201ENST00000385289 110 ntBASIC3.69□□□□□ -1.82
UBE3DQ7Z6J8 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.69□□□□□ -1.82
UBE3DQ7Z6J8 U3.40-201ENST00000408706 208 ntBASIC3.69□□□□□ -1.82
UBE3DQ7Z6J8 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.69□□□□□ -1.82
UBE3DQ7Z6J8 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.69□□□□□ -1.82
UBE3DQ7Z6J8 HMGN2P16-201ENST00000456802 261 ntBASIC3.69□□□□□ -1.82
UBE3DQ7Z6J8 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.69□□□□□ -1.82
UBE3DQ7Z6J8 RN7SKP164-201ENST00000516138 266 ntBASIC3.69□□□□□ -1.82
UBE3DQ7Z6J8 RNU6-436P-201ENST00000516171 114 ntBASIC3.69□□□□□ -1.82
UBE3DQ7Z6J8 RN7SKP21-201ENST00000516503 220 ntBASIC3.69□□□□□ -1.82
UBE3DQ7Z6J8 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.69□□□□□ -1.82
UBE3DQ7Z6J8 EIF4A1P12-201ENST00000551910 141 ntBASIC3.69□□□□□ -1.82
UBE3DQ7Z6J8 TGIF1P1-201ENST00000558095 802 ntBASIC3.69□□□□□ -1.82
UBE3DQ7Z6J8 AC090877.1-201ENST00000561418 344 ntBASIC3.69□□□□□ -1.82
UBE3DQ7Z6J8 PCGEM1.1-201ENST00000613431 131 ntBASIC3.69□□□□□ -1.82
UBE3DQ7Z6J8 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.69□□□□□ -1.82
UBE3DQ7Z6J8 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
UBE3DQ7Z6J8 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
UBE3DQ7Z6J8 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.69□□□□□ -1.82
UBE3DQ7Z6J8 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.69□□□□□ -1.82
UBE3DQ7Z6J8 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
UBE3DQ7Z6J8 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.69□□□□□ -1.82
UBE3DQ7Z6J8 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
UBE3DQ7Z6J8 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
UBE3DQ7Z6J8 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
UBE3DQ7Z6J8 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.68□□□□□ -1.82
UBE3DQ7Z6J8 RNU2-2P-201ENST00000410396 191 ntBASIC3.68□□□□□ -1.82
UBE3DQ7Z6J8 EBAG9P1-201ENST00000418955 543 ntBASIC3.68□□□□□ -1.82
UBE3DQ7Z6J8 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.68□□□□□ -1.82
UBE3DQ7Z6J8 TOMM22P2-201ENST00000430735 237 ntBASIC3.68□□□□□ -1.82
UBE3DQ7Z6J8 Y_RNA.637-201ENST00000459424 114 ntBASIC3.68□□□□□ -1.82
UBE3DQ7Z6J8 MIR2114-201ENST00000516645 80 ntBASIC3.68□□□□□ -1.82
UBE3DQ7Z6J8 AC136628.3-201ENST00000521868 290 ntBASIC3.68□□□□□ -1.82
UBE3DQ7Z6J8 MIR3684-201ENST00000579779 74 ntBASIC3.68□□□□□ -1.82
UBE3DQ7Z6J8 MIR4644-201ENST00000579929 84 ntBASIC3.68□□□□□ -1.82
UBE3DQ7Z6J8 MIR4697-201ENST00000582977 78 ntBASIC3.68□□□□□ -1.82
UBE3DQ7Z6J8 AC011471.1-201ENST00000585766 187 ntBASIC3.68□□□□□ -1.82
UBE3DQ7Z6J8 RNU2-4P-201ENST00000606190 192 ntBASIC3.68□□□□□ -1.82
UBE3DQ7Z6J8 U2.15-201ENST00000611544 191 ntBASIC3.68□□□□□ -1.82
UBE3DQ7Z6J8 U2.16-201ENST00000613119 191 ntBASIC3.68□□□□□ -1.82
UBE3DQ7Z6J8 U2.12-201ENST00000613778 191 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 231.1 ms