Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 RNU6-2-201ENST00000384627 107 ntBASIC2.39□□□□□ -2.03
NPHP3Q7Z494 RNU6-29P-201ENST00000384637 107 ntBASIC2.39□□□□□ -2.03
NPHP3Q7Z494 RNU6-9-201ENST00000384776 107 ntBASIC2.39□□□□□ -2.03
NPHP3Q7Z494 RNU6-33P-201ENST00000384793 107 ntBASIC2.39□□□□□ -2.03
NPHP3Q7Z494 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
NPHP3Q7Z494 RNA5SP219-201ENST00000390940 113 ntBASIC2.39□□□□□ -2.03
NPHP3Q7Z494 SEPT14P3-201ENST00000439401 183 ntBASIC2.39□□□□□ -2.03
NPHP3Q7Z494 AL732372.2-207ENST00000445840 183 ntBASIC2.39□□□□□ -2.03
NPHP3Q7Z494 SEPT14P2-201ENST00000453405 183 ntBASIC2.39□□□□□ -2.03
NPHP3Q7Z494 AC092989.1-201ENST00000481235 277 ntBASIC2.39□□□□□ -2.03
NPHP3Q7Z494 AC068781.1-201ENST00000488231 618 ntBASIC2.39□□□□□ -2.03
NPHP3Q7Z494 AC011352.1-201ENST00000512300 793 ntBASIC2.39□□□□□ -2.03
NPHP3Q7Z494 SEPT14P4-201ENST00000513445 186 ntBASIC2.39□□□□□ -2.03
NPHP3Q7Z494 SNORA25.17-201ENST00000517184 124 ntBASIC2.39□□□□□ -2.03
NPHP3Q7Z494 FO082796.1-201ENST00000523795 183 ntBASIC2.39□□□□□ -2.03
NPHP3Q7Z494 CBX3P7-201ENST00000532876 502 ntBASIC2.39□□□□□ -2.03
NPHP3Q7Z494 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.39□□□□□ -2.03
NPHP3Q7Z494 AL133241.1-201ENST00000556832 487 ntBASIC2.39□□□□□ -2.03
NPHP3Q7Z494 MTCO3P23-201ENST00000561363 289 ntBASIC2.39□□□□□ -2.03
NPHP3Q7Z494 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.39□□□□□ -2.03
NPHP3Q7Z494 AC010525.2-201ENST00000590920 195 ntBASIC2.39□□□□□ -2.03
NPHP3Q7Z494 AC123912.5-201ENST00000605470 343 ntBASIC2.39□□□□□ -2.03
NPHP3Q7Z494 SNORD14A-201ENST00000606526 91 ntBASIC2.39□□□□□ -2.03
NPHP3Q7Z494 RNU6-6P-201ENST00000606623 107 ntBASIC2.39□□□□□ -2.03
NPHP3Q7Z494 U2.17-201ENST00000611454 95 ntBASIC2.39□□□□□ -2.03
NPHP3Q7Z494 AC090517.2-201ENST00000614966 680 ntBASIC2.39□□□□□ -2.03
NPHP3Q7Z494 U4.5-201ENST00000617137 123 ntBASIC2.39□□□□□ -2.03
NPHP3Q7Z494 AC026585.1-201ENST00000619582 524 ntBASIC2.39□□□□□ -2.03
NPHP3Q7Z494 AC024581.2-201ENST00000619986 252 ntBASIC2.39□□□□□ -2.03
NPHP3Q7Z494 AC138627.2-201ENST00000624202 601 ntBASIC2.39□□□□□ -2.03
NPHP3Q7Z494 FER-210ENST00000628534 558 ntTSL 5 BASIC2.39□□□□□ -2.03
NPHP3Q7Z494 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
NPHP3Q7Z494 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
NPHP3Q7Z494 AL391987.6-201ENST00000305671 199 ntBASIC2.38□□□□□ -2.03
NPHP3Q7Z494 RNY4P14-201ENST00000363656 96 ntBASIC2.38□□□□□ -2.03
NPHP3Q7Z494 RNU6-266P-201ENST00000364225 107 ntBASIC2.38□□□□□ -2.03
NPHP3Q7Z494 Y_RNA.399-201ENST00000383955 105 ntBASIC2.38□□□□□ -2.03
NPHP3Q7Z494 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.38□□□□□ -2.03
NPHP3Q7Z494 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.38□□□□□ -2.03
NPHP3Q7Z494 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.38□□□□□ -2.03
NPHP3Q7Z494 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.38□□□□□ -2.03
NPHP3Q7Z494 RNU7-167P-201ENST00000459160 62 ntBASIC2.38□□□□□ -2.03
NPHP3Q7Z494 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.38□□□□□ -2.03
NPHP3Q7Z494 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.38□□□□□ -2.03
NPHP3Q7Z494 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.38□□□□□ -2.03
NPHP3Q7Z494 MIR6895-201ENST00000613497 78 ntBASIC2.38□□□□□ -2.03
NPHP3Q7Z494 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.37□□□□□ -2.03
NPHP3Q7Z494 RNU6-451P-201ENST00000362921 107 ntBASIC2.37□□□□□ -2.03
NPHP3Q7Z494 OR9R1P-201ENST00000412200 877 ntBASIC2.37□□□□□ -2.03
NPHP3Q7Z494 FCF1P9-201ENST00000412546 282 ntBASIC2.37□□□□□ -2.03
NPHP3Q7Z494 EIF4EP4-201ENST00000424916 578 ntBASIC2.37□□□□□ -2.03
NPHP3Q7Z494 AL645568.3-201ENST00000433683 316 ntBASIC2.37□□□□□ -2.03
NPHP3Q7Z494 UBE2V1P8-201ENST00000437166 265 ntBASIC2.37□□□□□ -2.03
NPHP3Q7Z494 PPP1R2P5-201ENST00000457256 603 ntBASIC2.37□□□□□ -2.03
NPHP3Q7Z494 AP004607.1-201ENST00000524456 203 ntBASIC2.37□□□□□ -2.03
NPHP3Q7Z494 CENPUP1-201ENST00000526649 1202 ntBASIC2.37□□□□□ -2.03
NPHP3Q7Z494 AP003033.1-201ENST00000527244 415 ntBASIC2.37□□□□□ -2.03
NPHP3Q7Z494 AC109635.3-201ENST00000529536 185 ntBASIC2.37□□□□□ -2.03
NPHP3Q7Z494 NDUFA5P6-201ENST00000542110 379 ntBASIC2.37□□□□□ -2.03
NPHP3Q7Z494 AC090115.3-201ENST00000553218 849 ntBASIC2.37□□□□□ -2.03
NPHP3Q7Z494 AC136619.2-201ENST00000563361 631 ntBASIC2.37□□□□□ -2.03
NPHP3Q7Z494 MIR6504-201ENST00000613520 61 ntBASIC2.37□□□□□ -2.03
NPHP3Q7Z494 RMST_7.1-201ENST00000621935 268 ntBASIC2.37□□□□□ -2.03
NPHP3Q7Z494 Z69720.2-201ENST00000624755 279 ntBASIC2.37□□□□□ -2.03
NPHP3Q7Z494 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.37□□□□□ -2.03
NPHP3Q7Z494 OR4G1P-203ENST00000641984 1631 ntBASIC2.36□□□□□ -2.03
NPHP3Q7Z494 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
NPHP3Q7Z494 AC138393.1-203ENST00000327086 343 ntBASIC2.36□□□□□ -2.03
NPHP3Q7Z494 RNY3P3-201ENST00000363816 102 ntBASIC2.36□□□□□ -2.03
NPHP3Q7Z494 SNORD116-20-201ENST00000384529 92 ntBASIC2.36□□□□□ -2.03
NPHP3Q7Z494 MIR524-201ENST00000385242 87 ntBASIC2.36□□□□□ -2.03
NPHP3Q7Z494 USP9YP18-201ENST00000425912 695 ntBASIC2.36□□□□□ -2.03
NPHP3Q7Z494 AL137159.1-201ENST00000452808 512 ntBASIC2.36□□□□□ -2.03
NPHP3Q7Z494 AC090515.1-201ENST00000465295 476 ntBASIC2.36□□□□□ -2.03
NPHP3Q7Z494 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.36□□□□□ -2.03
NPHP3Q7Z494 AC018437.1-201ENST00000492214 406 ntBASIC2.36□□□□□ -2.03
NPHP3Q7Z494 AF213884.2-201ENST00000510417 903 ntBASIC2.36□□□□□ -2.03
NPHP3Q7Z494 SNORA43.2-201ENST00000516652 128 ntBASIC2.36□□□□□ -2.03
NPHP3Q7Z494 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.36□□□□□ -2.03
NPHP3Q7Z494 CBX3P4-201ENST00000538909 354 ntBASIC2.36□□□□□ -2.03
NPHP3Q7Z494 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.36□□□□□ -2.03
NPHP3Q7Z494 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.36□□□□□ -2.03
NPHP3Q7Z494 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.36□□□□□ -2.03
NPHP3Q7Z494 AC092747.3-201ENST00000603769 301 ntBASIC2.36□□□□□ -2.03
NPHP3Q7Z494 AL138963.2-201ENST00000605137 226 ntBASIC2.36□□□□□ -2.03
NPHP3Q7Z494 RNU6-89P-201ENST00000606519 100 ntBASIC2.36□□□□□ -2.03
NPHP3Q7Z494 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
NPHP3Q7Z494 RMST_3.1-201ENST00000611651 109 ntBASIC2.36□□□□□ -2.03
NPHP3Q7Z494 AC122108.2-201ENST00000611946 526 ntBASIC2.36□□□□□ -2.03
NPHP3Q7Z494 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
NPHP3Q7Z494 MIR3688-2-201ENST00000636963 87 ntBASIC2.36□□□□□ -2.03
NPHP3Q7Z494 AC024614.3-201ENST00000637860 256 ntBASIC2.36□□□□□ -2.03
NPHP3Q7Z494 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
NPHP3Q7Z494 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.35□□□□□ -2.03
NPHP3Q7Z494 Y_RNA.89-201ENST00000363031 102 ntBASIC2.35□□□□□ -2.03
NPHP3Q7Z494 SNORA3A-201ENST00000364113 130 ntBASIC2.35□□□□□ -2.03
NPHP3Q7Z494 Y_RNA.256-201ENST00000364594 104 ntBASIC2.35□□□□□ -2.03
NPHP3Q7Z494 Y_RNA.453-201ENST00000384223 109 ntBASIC2.35□□□□□ -2.03
NPHP3Q7Z494 Y_RNA.480-201ENST00000384364 102 ntBASIC2.35□□□□□ -2.03
NPHP3Q7Z494 MIR514A2-201ENST00000385131 88 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms