Protein–RNA interactions for Protein: Q6P9F5

TRIM40, Tripartite motif-containing protein 40, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40Q6P9F5 AC008147.4-201ENST00000617570 1204 ntBASIC1.55□□□□□ -2.16
TRIM40Q6P9F5 AL353997.5-201ENST00000618886 171 ntBASIC1.55□□□□□ -2.16
TRIM40Q6P9F5 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.55□□□□□ -2.16
TRIM40Q6P9F5 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
TRIM40Q6P9F5 AC006026.1-201ENST00000444025 1803 ntBASIC1.54□□□□□ -2.16
TRIM40Q6P9F5 RNA5SP99-201ENST00000364020 114 ntBASIC1.54□□□□□ -2.16
TRIM40Q6P9F5 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
TRIM40Q6P9F5 RNU6-142P-201ENST00000384019 107 ntBASIC1.54□□□□□ -2.16
TRIM40Q6P9F5 RNU6-517P-201ENST00000384362 110 ntBASIC1.54□□□□□ -2.16
TRIM40Q6P9F5 SNORD116-8-201ENST00000384365 95 ntBASIC1.54□□□□□ -2.16
TRIM40Q6P9F5 RNU6-482P-201ENST00000391068 107 ntBASIC1.54□□□□□ -2.16
TRIM40Q6P9F5 SNORA12-201ENST00000391162 147 ntBASIC1.54□□□□□ -2.16
TRIM40Q6P9F5 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.54□□□□□ -2.16
TRIM40Q6P9F5 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.54□□□□□ -2.16
TRIM40Q6P9F5 EIF4EP2-201ENST00000422816 654 ntBASIC1.54□□□□□ -2.16
TRIM40Q6P9F5 SNAP23P1-201ENST00000433229 246 ntBASIC1.54□□□□□ -2.16
TRIM40Q6P9F5 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.54□□□□□ -2.16
TRIM40Q6P9F5 AL031274.1-201ENST00000450334 232 ntBASIC1.54□□□□□ -2.16
TRIM40Q6P9F5 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.54□□□□□ -2.16
TRIM40Q6P9F5 AC069113.1-201ENST00000517763 267 ntBASIC1.54□□□□□ -2.16
TRIM40Q6P9F5 AL356057.1-201ENST00000533798 831 ntBASIC1.54□□□□□ -2.16
TRIM40Q6P9F5 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.54□□□□□ -2.16
TRIM40Q6P9F5 MTATP6P3-201ENST00000581686 676 ntBASIC1.54□□□□□ -2.16
TRIM40Q6P9F5 BNIP3P25-201ENST00000596023 559 ntBASIC1.54□□□□□ -2.16
TRIM40Q6P9F5 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.54□□□□□ -2.16
TRIM40Q6P9F5 CYP2C61P-201ENST00000604072 290 ntBASIC1.54□□□□□ -2.16
TRIM40Q6P9F5 U1.36-201ENST00000620684 176 ntBASIC1.54□□□□□ -2.16
TRIM40Q6P9F5 AC078883.4-201ENST00000623218 367 ntBASIC1.54□□□□□ -2.16
TRIM40Q6P9F5 AC005609.4-201ENST00000625071 447 ntBASIC1.54□□□□□ -2.16
TRIM40Q6P9F5 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
TRIM40Q6P9F5 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.54□□□□□ -2.16
TRIM40Q6P9F5 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
TRIM40Q6P9F5 RNU1-17P-201ENST00000363022 152 ntBASIC1.53□□□□□ -2.16
TRIM40Q6P9F5 SNORD32A-201ENST00000364805 84 ntBASIC1.53□□□□□ -2.16
TRIM40Q6P9F5 RNA5SP190-201ENST00000365222 118 ntBASIC1.53□□□□□ -2.16
TRIM40Q6P9F5 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
TRIM40Q6P9F5 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.53□□□□□ -2.16
TRIM40Q6P9F5 AL357139.1-201ENST00000407792 426 ntBASIC1.53□□□□□ -2.16
TRIM40Q6P9F5 RN7SKP61-201ENST00000410642 295 ntBASIC1.53□□□□□ -2.16
TRIM40Q6P9F5 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.53□□□□□ -2.16
TRIM40Q6P9F5 AL358453.1-201ENST00000422522 250 ntBASIC1.53□□□□□ -2.16
TRIM40Q6P9F5 UBE2V1P4-201ENST00000425374 344 ntBASIC1.53□□□□□ -2.16
TRIM40Q6P9F5 MTND4P14-201ENST00000435799 1354 ntBASIC1.53□□□□□ -2.16
TRIM40Q6P9F5 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.53□□□□□ -2.16
TRIM40Q6P9F5 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.53□□□□□ -2.16
TRIM40Q6P9F5 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.53□□□□□ -2.16
TRIM40Q6P9F5 RNU6-333P-201ENST00000459117 107 ntBASIC1.53□□□□□ -2.16
TRIM40Q6P9F5 RNU7-167P-201ENST00000459160 62 ntBASIC1.53□□□□□ -2.16
TRIM40Q6P9F5 AC132942.1-201ENST00000486753 483 ntBASIC1.53□□□□□ -2.16
TRIM40Q6P9F5 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.53□□□□□ -2.16
TRIM40Q6P9F5 CBX3P4-201ENST00000538909 354 ntBASIC1.53□□□□□ -2.16
TRIM40Q6P9F5 OSBPL9P5-201ENST00000542581 171 ntBASIC1.53□□□□□ -2.16
TRIM40Q6P9F5 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.53□□□□□ -2.16
TRIM40Q6P9F5 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.53□□□□□ -2.16
TRIM40Q6P9F5 AC022254.1-201ENST00000567857 235 ntBASIC1.53□□□□□ -2.16
TRIM40Q6P9F5 AL356157.2-201ENST00000605122 111 ntBASIC1.53□□□□□ -2.16
TRIM40Q6P9F5 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
TRIM40Q6P9F5 RNU6-234P-201ENST00000365229 104 ntBASIC1.52□□□□□ -2.17
TRIM40Q6P9F5 RNU6-827P-201ENST00000365553 106 ntBASIC1.52□□□□□ -2.17
TRIM40Q6P9F5 SNORA75-201ENST00000384158 137 ntBASIC1.52□□□□□ -2.17
TRIM40Q6P9F5 RNU6-160P-201ENST00000384591 107 ntBASIC1.52□□□□□ -2.17
TRIM40Q6P9F5 RNA5SP501-201ENST00000410990 112 ntBASIC1.52□□□□□ -2.17
TRIM40Q6P9F5 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.52□□□□□ -2.17
TRIM40Q6P9F5 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
TRIM40Q6P9F5 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.52□□□□□ -2.17
TRIM40Q6P9F5 AL590135.1-201ENST00000422215 156 ntBASIC1.52□□□□□ -2.17
TRIM40Q6P9F5 AC019205.3-201ENST00000424573 156 ntBASIC1.52□□□□□ -2.17
TRIM40Q6P9F5 AC078809.1-201ENST00000427601 140 ntBASIC1.52□□□□□ -2.17
TRIM40Q6P9F5 CETN4P-201ENST00000432407 469 ntBASIC1.52□□□□□ -2.17
TRIM40Q6P9F5 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.52□□□□□ -2.17
TRIM40Q6P9F5 AC016700.2-201ENST00000446011 156 ntBASIC1.52□□□□□ -2.17
TRIM40Q6P9F5 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.52□□□□□ -2.17
TRIM40Q6P9F5 RNU6-956P-201ENST00000458868 103 ntBASIC1.52□□□□□ -2.17
TRIM40Q6P9F5 RNU7-63P-201ENST00000459054 62 ntBASIC1.52□□□□□ -2.17
TRIM40Q6P9F5 AC015911.1-201ENST00000495111 156 ntBASIC1.52□□□□□ -2.17
TRIM40Q6P9F5 AC098862.1-201ENST00000504991 413 ntBASIC1.52□□□□□ -2.17
TRIM40Q6P9F5 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
TRIM40Q6P9F5 AK3P2-201ENST00000507976 429 ntBASIC1.52□□□□□ -2.17
TRIM40Q6P9F5 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
TRIM40Q6P9F5 RNU6-237P-201ENST00000515985 71 ntBASIC1.52□□□□□ -2.17
TRIM40Q6P9F5 MIR449C-201ENST00000516047 92 ntBASIC1.52□□□□□ -2.17
TRIM40Q6P9F5 SNORA31.16-201ENST00000516773 139 ntBASIC1.52□□□□□ -2.17
TRIM40Q6P9F5 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.52□□□□□ -2.17
TRIM40Q6P9F5 HIF1AP1-201ENST00000553642 175 ntBASIC1.52□□□□□ -2.17
TRIM40Q6P9F5 AC103996.1-201ENST00000555468 102 ntBASIC1.52□□□□□ -2.17
TRIM40Q6P9F5 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.52□□□□□ -2.17
TRIM40Q6P9F5 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC1.52□□□□□ -2.17
TRIM40Q6P9F5 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.52□□□□□ -2.17
TRIM40Q6P9F5 MIR5583-1-201ENST00000580941 59 ntBASIC1.52□□□□□ -2.17
TRIM40Q6P9F5 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.52□□□□□ -2.17
TRIM40Q6P9F5 MIR4713-201ENST00000582691 75 ntBASIC1.52□□□□□ -2.17
TRIM40Q6P9F5 AC110760.3-201ENST00000598794 467 ntBASIC1.52□□□□□ -2.17
TRIM40Q6P9F5 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.52□□□□□ -2.17
TRIM40Q6P9F5 Z99497.2-201ENST00000603634 310 ntBASIC1.52□□□□□ -2.17
TRIM40Q6P9F5 BX248123.2-201ENST00000606318 124 ntBASIC1.52□□□□□ -2.17
TRIM40Q6P9F5 AC068944.2-201ENST00000610373 403 ntBASIC1.52□□□□□ -2.17
TRIM40Q6P9F5 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.52□□□□□ -2.17
TRIM40Q6P9F5 U2.17-201ENST00000611454 95 ntBASIC1.52□□□□□ -2.17
TRIM40Q6P9F5 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
TRIM40Q6P9F5 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms