Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AC079416.3-201ENST00000624479 549 ntBASIC-0.56□□□□□ -2.5
CDC42BPAQ5VT25 MTND5P31-201ENST00000419366 1374 ntBASIC-0.57□□□□□ -2.5
CDC42BPAQ5VT25 MTCO2P34-201ENST00000421994 607 ntBASIC-0.57□□□□□ -2.5
CDC42BPAQ5VT25 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC-0.57□□□□□ -2.5
CDC42BPAQ5VT25 AC104332.1-201ENST00000440471 797 ntBASIC-0.57□□□□□ -2.5
CDC42BPAQ5VT25 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC-0.57□□□□□ -2.5
CDC42BPAQ5VT25 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.57□□□□□ -2.5
CDC42BPAQ5VT25 RNU6-333P-201ENST00000459117 107 ntBASIC-0.57□□□□□ -2.5
CDC42BPAQ5VT25 snoU13.27-201ENST00000459278 104 ntBASIC-0.57□□□□□ -2.5
CDC42BPAQ5VT25 RPL39P38-201ENST00000467018 153 ntBASIC-0.57□□□□□ -2.5
CDC42BPAQ5VT25 AC113420.1-201ENST00000507903 571 ntBASIC-0.57□□□□□ -2.5
CDC42BPAQ5VT25 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC-0.57□□□□□ -2.5
CDC42BPAQ5VT25 RNU1-117P-201ENST00000517041 158 ntBASIC-0.57□□□□□ -2.5
CDC42BPAQ5VT25 AC009712.1-201ENST00000564938 316 ntBASIC-0.57□□□□□ -2.5
CDC42BPAQ5VT25 CTHRC1P1-201ENST00000605383 469 ntBASIC-0.57□□□□□ -2.5
CDC42BPAQ5VT25 SNORD82-201ENST00000365530 70 ntBASIC-0.58□□□□□ -2.5
CDC42BPAQ5VT25 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.58□□□□□ -2.5
CDC42BPAQ5VT25 SNORD116-13-201ENST00000384408 92 ntBASIC-0.58□□□□□ -2.5
CDC42BPAQ5VT25 RNU6-1176P-201ENST00000390955 107 ntBASIC-0.58□□□□□ -2.5
CDC42BPAQ5VT25 AL121978.1-201ENST00000402778 359 ntBASIC-0.58□□□□□ -2.5
CDC42BPAQ5VT25 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC-0.58□□□□□ -2.5
CDC42BPAQ5VT25 SKA2P1-201ENST00000425592 390 ntBASIC-0.58□□□□□ -2.5
CDC42BPAQ5VT25 RPL23AP50-201ENST00000434149 455 ntBASIC-0.58□□□□□ -2.5
CDC42BPAQ5VT25 AC092001.1-201ENST00000453012 261 ntBASIC-0.58□□□□□ -2.5
CDC42BPAQ5VT25 RNU7-159P-201ENST00000459284 62 ntBASIC-0.58□□□□□ -2.5
CDC42BPAQ5VT25 AP000797.1-201ENST00000478870 387 ntBASIC-0.58□□□□□ -2.5
CDC42BPAQ5VT25 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.58□□□□□ -2.5
CDC42BPAQ5VT25 RNA5SP437-201ENST00000517249 129 ntBASIC-0.58□□□□□ -2.5
CDC42BPAQ5VT25 PRELID3BP2-201ENST00000605362 201 ntBASIC-0.58□□□□□ -2.5
CDC42BPAQ5VT25 AC018926.1-201ENST00000616335 435 ntBASIC-0.58□□□□□ -2.5
CDC42BPAQ5VT25 AC010615.1-201ENST00000594254 1764 ntBASIC-0.58□□□□□ -2.5
CDC42BPAQ5VT25 SUGT1P1-201ENST00000379514 476 ntBASIC-0.58□□□□□ -2.5
CDC42BPAQ5VT25 RNU6-331P-201ENST00000384724 107 ntBASIC-0.58□□□□□ -2.5
CDC42BPAQ5VT25 MIR892B-201ENST00000401279 77 ntBASIC-0.58□□□□□ -2.5
CDC42BPAQ5VT25 MIR548H2-201ENST00000408874 88 ntBASIC-0.58□□□□□ -2.5
CDC42BPAQ5VT25 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC-0.58□□□□□ -2.5
CDC42BPAQ5VT25 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC-0.58□□□□□ -2.5
CDC42BPAQ5VT25 HMGN3P1-201ENST00000453847 193 ntBASIC-0.58□□□□□ -2.5
CDC42BPAQ5VT25 RPL31P53-201ENST00000457065 348 ntBASIC-0.58□□□□□ -2.5
CDC42BPAQ5VT25 AC011005.2-201ENST00000487324 359 ntBASIC-0.58□□□□□ -2.5
CDC42BPAQ5VT25 RNU6-581P-201ENST00000516214 105 ntBASIC-0.58□□□□□ -2.5
CDC42BPAQ5VT25 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.58□□□□□ -2.5
CDC42BPAQ5VT25 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC-0.58□□□□□ -2.5
CDC42BPAQ5VT25 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC-0.58□□□□□ -2.5
CDC42BPAQ5VT25 AC122134.1-202ENST00000569111 1201 ntBASIC-0.58□□□□□ -2.5
CDC42BPAQ5VT25 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.58□□□□□ -2.5
CDC42BPAQ5VT25 AC012065.4-201ENST00000602445 679 ntBASIC-0.58□□□□□ -2.5
CDC42BPAQ5VT25 AC116165.2-201ENST00000616705 206 ntBASIC-0.58□□□□□ -2.5
CDC42BPAQ5VT25 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC-0.58□□□□□ -2.5
CDC42BPAQ5VT25 Y_RNA.25-201ENST00000362528 102 ntBASIC-0.59□□□□□ -2.5
CDC42BPAQ5VT25 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.59□□□□□ -2.5
CDC42BPAQ5VT25 RNU4-46P-201ENST00000410818 138 ntBASIC-0.59□□□□□ -2.5
CDC42BPAQ5VT25 BTF3L4P1-201ENST00000413813 468 ntBASIC-0.59□□□□□ -2.5
CDC42BPAQ5VT25 AL008629.1-201ENST00000438615 184 ntBASIC-0.59□□□□□ -2.5
CDC42BPAQ5VT25 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC-0.59□□□□□ -2.5
CDC42BPAQ5VT25 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC-0.59□□□□□ -2.5
CDC42BPAQ5VT25 RNU7-165P-201ENST00000458864 60 ntBASIC-0.59□□□□□ -2.5
CDC42BPAQ5VT25 AC091860.1-201ENST00000505723 432 ntBASIC-0.59□□□□□ -2.5
CDC42BPAQ5VT25 AC113398.2-201ENST00000507630 558 ntBASIC-0.59□□□□□ -2.5
CDC42BPAQ5VT25 RNU6-947P-201ENST00000516264 106 ntBASIC-0.59□□□□□ -2.5
CDC42BPAQ5VT25 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC-0.59□□□□□ -2.5
CDC42BPAQ5VT25 AC119674.1-220ENST00000641502 1048 ntBASIC-0.59□□□□□ -2.5
CDC42BPAQ5VT25 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.59□□□□□ -2.5
CDC42BPAQ5VT25 SNORD105-201ENST00000386910 85 ntBASIC-0.6□□□□□ -2.51
CDC42BPAQ5VT25 RNU6-679P-201ENST00000391003 106 ntBASIC-0.6□□□□□ -2.51
CDC42BPAQ5VT25 RNU6-284P-201ENST00000411105 106 ntBASIC-0.6□□□□□ -2.51
CDC42BPAQ5VT25 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC-0.6□□□□□ -2.51
CDC42BPAQ5VT25 AL353621.1-201ENST00000418219 243 ntBASIC-0.6□□□□□ -2.51
CDC42BPAQ5VT25 AC007919.1-201ENST00000429380 217 ntBASIC-0.6□□□□□ -2.51
CDC42BPAQ5VT25 RPS27AP8-201ENST00000452665 445 ntBASIC-0.6□□□□□ -2.51
CDC42BPAQ5VT25 MTCO2P18-201ENST00000457151 658 ntBASIC-0.6□□□□□ -2.51
CDC42BPAQ5VT25 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.6□□□□□ -2.51
CDC42BPAQ5VT25 RNU6-965P-201ENST00000516721 96 ntBASIC-0.6□□□□□ -2.51
CDC42BPAQ5VT25 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.6□□□□□ -2.51
CDC42BPAQ5VT25 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-0.6□□□□□ -2.51
CDC42BPAQ5VT25 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.6□□□□□ -2.51
CDC42BPAQ5VT25 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.6□□□□□ -2.51
CDC42BPAQ5VT25 RNY1P9-201ENST00000532431 109 ntBASIC-0.6□□□□□ -2.51
CDC42BPAQ5VT25 AL356057.1-201ENST00000533798 831 ntBASIC-0.6□□□□□ -2.51
CDC42BPAQ5VT25 AC109810.1-201ENST00000534066 224 ntBASIC-0.6□□□□□ -2.51
CDC42BPAQ5VT25 BNIP3P6-201ENST00000549284 499 ntBASIC-0.6□□□□□ -2.51
CDC42BPAQ5VT25 AL353997.4-201ENST00000586196 166 ntBASIC-0.6□□□□□ -2.51
CDC42BPAQ5VT25 RNU6ATAC35P-201ENST00000609276 444 ntBASIC-0.6□□□□□ -2.51
CDC42BPAQ5VT25 AC004009.2-201ENST00000623016 728 ntBASIC-0.6□□□□□ -2.51
CDC42BPAQ5VT25 AL359697.1-201ENST00000624879 587 ntBASIC-0.6□□□□□ -2.51
CDC42BPAQ5VT25 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC-0.6□□□□□ -2.51
CDC42BPAQ5VT25 AC107982.1-201ENST00000507171 1300 ntBASIC-0.6□□□□□ -2.51
CDC42BPAQ5VT25 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC-0.61□□□□□ -2.51
CDC42BPAQ5VT25 RNU6-1019P-201ENST00000364424 107 ntBASIC-0.61□□□□□ -2.51
CDC42BPAQ5VT25 RNA5SP517-201ENST00000364724 117 ntBASIC-0.61□□□□□ -2.51
CDC42BPAQ5VT25 MIR601-201ENST00000385256 79 ntBASIC-0.61□□□□□ -2.51
CDC42BPAQ5VT25 AL136310.1-201ENST00000404926 654 ntBASIC-0.61□□□□□ -2.51
CDC42BPAQ5VT25 SNORD71-201ENST00000411292 86 ntBASIC-0.61□□□□□ -2.51
CDC42BPAQ5VT25 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC-0.61□□□□□ -2.51
CDC42BPAQ5VT25 MTCO3P45-201ENST00000443036 613 ntBASIC-0.61□□□□□ -2.51
CDC42BPAQ5VT25 RNFT1P2-201ENST00000443064 757 ntBASIC-0.61□□□□□ -2.51
CDC42BPAQ5VT25 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.61□□□□□ -2.51
CDC42BPAQ5VT25 RNU6-138P-201ENST00000515952 107 ntBASIC-0.61□□□□□ -2.51
CDC42BPAQ5VT25 AF235103.2-201ENST00000525753 346 ntBASIC-0.61□□□□□ -2.51
CDC42BPAQ5VT25 ZNF519P3-201ENST00000557158 1032 ntBASIC-0.61□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms