Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 CYCSP23-201ENST00000519781 313 ntBASIC0.7□□□□□ -2.3
ARFGEF3Q5TH69 MIR4698-201ENST00000577795 80 ntBASIC0.7□□□□□ -2.3
ARFGEF3Q5TH69 BNIP3P40-201ENST00000596017 556 ntBASIC0.7□□□□□ -2.3
ARFGEF3Q5TH69 AL020996.3-201ENST00000606617 222 ntBASIC0.7□□□□□ -2.3
ARFGEF3Q5TH69 AL139418.1-201ENST00000613613 177 ntBASIC0.7□□□□□ -2.3
ARFGEF3Q5TH69 AC026585.1-201ENST00000619582 524 ntBASIC0.7□□□□□ -2.3
ARFGEF3Q5TH69 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
ARFGEF3Q5TH69 MIR8065-201ENST00000620577 100 ntBASIC0.7□□□□□ -2.3
ARFGEF3Q5TH69 MIR6835-201ENST00000621552 64 ntBASIC0.7□□□□□ -2.3
ARFGEF3Q5TH69 AC092656.1-203ENST00000624134 423 ntBASIC0.7□□□□□ -2.3
ARFGEF3Q5TH69 U4.7-201ENST00000638126 106 ntBASIC0.7□□□□□ -2.3
ARFGEF3Q5TH69 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.7□□□□□ -2.3
ARFGEF3Q5TH69 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
ARFGEF3Q5TH69 SNORD114-2-201ENST00000363953 78 ntBASIC0.7□□□□□ -2.3
ARFGEF3Q5TH69 RNU6-505P-201ENST00000384427 107 ntBASIC0.7□□□□□ -2.3
ARFGEF3Q5TH69 RNU1-139P-201ENST00000391307 165 ntBASIC0.7□□□□□ -2.3
ARFGEF3Q5TH69 AL133475.1-201ENST00000404414 305 ntBASIC0.7□□□□□ -2.3
ARFGEF3Q5TH69 ELOCP4-201ENST00000420090 333 ntBASIC0.7□□□□□ -2.3
ARFGEF3Q5TH69 AL590556.1-201ENST00000423231 483 ntBASIC0.7□□□□□ -2.3
ARFGEF3Q5TH69 RPL39P29-201ENST00000447779 157 ntBASIC0.7□□□□□ -2.3
ARFGEF3Q5TH69 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC0.7□□□□□ -2.3
ARFGEF3Q5TH69 MTND1P12-201ENST00000455231 147 ntBASIC0.7□□□□□ -2.3
ARFGEF3Q5TH69 AP000797.1-201ENST00000478870 387 ntBASIC0.7□□□□□ -2.3
ARFGEF3Q5TH69 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.7□□□□□ -2.3
ARFGEF3Q5TH69 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.7□□□□□ -2.3
ARFGEF3Q5TH69 RNU1-86P-201ENST00000516108 154 ntBASIC0.7□□□□□ -2.3
ARFGEF3Q5TH69 Y_RNA.681-201ENST00000516445 113 ntBASIC0.7□□□□□ -2.3
ARFGEF3Q5TH69 RNU1-107P-201ENST00000516617 154 ntBASIC0.7□□□□□ -2.3
ARFGEF3Q5TH69 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC0.7□□□□□ -2.3
ARFGEF3Q5TH69 RN7SL793P-201ENST00000583259 296 ntBASIC0.7□□□□□ -2.3
ARFGEF3Q5TH69 MIR3136-201ENST00000583498 78 ntBASIC0.7□□□□□ -2.3
ARFGEF3Q5TH69 AC027807.2-201ENST00000616099 408 ntBASIC0.7□□□□□ -2.3
ARFGEF3Q5TH69 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
ARFGEF3Q5TH69 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 RNU5F-6P-201ENST00000362979 116 ntBASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 RNA5SP257-201ENST00000363023 116 ntBASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 RNA5SP457-201ENST00000363657 124 ntBASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 RNU4-28P-201ENST00000364739 141 ntBASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 RNU2-36P-201ENST00000410361 191 ntBASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 BTF3L4P1-201ENST00000413813 468 ntBASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 AC112492.4-201ENST00000456549 352 ntBASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 AC011005.2-201ENST00000487324 359 ntBASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 MTCO3P28-201ENST00000513351 515 ntBASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 RNU6-351P-201ENST00000516097 100 ntBASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 AL442163.3-201ENST00000554110 156 ntBASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 AC090517.1-201ENST00000569307 266 ntBASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 AC005668.1-201ENST00000571142 476 ntBASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 AC008945.2-201ENST00000606056 604 ntBASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 AC097372.5-201ENST00000623665 376 ntBASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 AC099654.5-201ENST00000636479 350 ntBASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 SNORD33-201ENST00000362761 85 ntBASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 U3.4-201ENST00000363352 213 ntBASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 RNU6-371P-201ENST00000364283 108 ntBASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 RNU6-1164P-201ENST00000364428 107 ntBASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 RNU6-25P-201ENST00000383873 107 ntBASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 RNU6-48P-201ENST00000384161 107 ntBASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 RNU6-16P-201ENST00000384385 107 ntBASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 RNU6-15P-201ENST00000384534 107 ntBASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 RNU6-29P-201ENST00000384637 107 ntBASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 MIR544A-201ENST00000384855 91 ntBASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 RNU6-1176P-201ENST00000390955 107 ntBASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 AC005534.2-201ENST00000431047 433 ntBASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 USP9YP17-201ENST00000444617 696 ntBASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 EXOSC3P1-201ENST00000448649 500 ntBASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 AC007547.1-201ENST00000462177 490 ntBASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 MIR5094-201ENST00000578766 85 ntBASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 AL512605.2-201ENST00000592972 256 ntBASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 AP000654.2-201ENST00000605633 586 ntBASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 AC018645.2-201ENST00000609151 472 ntBASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 AC008993.2-201ENST00000631744 806 ntBASIC0.69□□□□□ -2.3
ARFGEF3Q5TH69 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.68□□□□□ -2.3
ARFGEF3Q5TH69 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
ARFGEF3Q5TH69 RNU6-1285P-201ENST00000363480 105 ntBASIC0.68□□□□□ -2.3
ARFGEF3Q5TH69 SNORD32A-201ENST00000364805 84 ntBASIC0.68□□□□□ -2.3
ARFGEF3Q5TH69 MIR194-1-201ENST00000384892 85 ntBASIC0.68□□□□□ -2.3
ARFGEF3Q5TH69 MIR193B-201ENST00000384907 83 ntBASIC0.68□□□□□ -2.3
ARFGEF3Q5TH69 MIR216A-201ENST00000385063 110 ntBASIC0.68□□□□□ -2.3
ARFGEF3Q5TH69 RNU6-387P-201ENST00000411331 105 ntBASIC0.68□□□□□ -2.3
ARFGEF3Q5TH69 AC114491.1-201ENST00000416095 246 ntBASIC0.68□□□□□ -2.3
ARFGEF3Q5TH69 RPL21P111-201ENST00000418453 477 ntBASIC0.68□□□□□ -2.3
ARFGEF3Q5TH69 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.68□□□□□ -2.3
ARFGEF3Q5TH69 CST2P1-201ENST00000425770 87 ntBASIC0.68□□□□□ -2.3
ARFGEF3Q5TH69 FTH1P12-201ENST00000432137 551 ntBASIC0.68□□□□□ -2.3
ARFGEF3Q5TH69 HMGN1P13-201ENST00000505795 138 ntBASIC0.68□□□□□ -2.3
ARFGEF3Q5TH69 AC074344.1-201ENST00000512823 224 ntBASIC0.68□□□□□ -2.3
ARFGEF3Q5TH69 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms