Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.93□□□□□ -1.94
TTC39AQ5SRH9 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
TTC39AQ5SRH9 MTND5P10-201ENST00000603719 1809 ntBASIC2.93□□□□□ -1.94
TTC39AQ5SRH9 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
TTC39AQ5SRH9 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.92□□□□□ -1.94
TTC39AQ5SRH9 Y_RNA.128-201ENST00000363391 112 ntBASIC2.92□□□□□ -1.94
TTC39AQ5SRH9 Y_RNA.197-201ENST00000364004 102 ntBASIC2.92□□□□□ -1.94
TTC39AQ5SRH9 SNORD114-30-201ENST00000364448 72 ntBASIC2.92□□□□□ -1.94
TTC39AQ5SRH9 Y_RNA.445-201ENST00000384168 102 ntBASIC2.92□□□□□ -1.94
TTC39AQ5SRH9 RNU6-933P-201ENST00000384424 107 ntBASIC2.92□□□□□ -1.94
TTC39AQ5SRH9 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
TTC39AQ5SRH9 RNU6-1106P-201ENST00000390845 107 ntBASIC2.92□□□□□ -1.94
TTC39AQ5SRH9 AL513475.1-201ENST00000406602 315 ntBASIC2.92□□□□□ -1.94
TTC39AQ5SRH9 RPS15AP10-201ENST00000432472 382 ntBASIC2.92□□□□□ -1.94
TTC39AQ5SRH9 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.92□□□□□ -1.94
TTC39AQ5SRH9 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.92□□□□□ -1.94
TTC39AQ5SRH9 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.92□□□□□ -1.94
TTC39AQ5SRH9 RNU7-23P-201ENST00000459465 62 ntBASIC2.92□□□□□ -1.94
TTC39AQ5SRH9 SCARNA16.2-201ENST00000516520 172 ntBASIC2.92□□□□□ -1.94
TTC39AQ5SRH9 SNORA43.2-201ENST00000516652 128 ntBASIC2.92□□□□□ -1.94
TTC39AQ5SRH9 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.92□□□□□ -1.94
TTC39AQ5SRH9 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.92□□□□□ -1.94
TTC39AQ5SRH9 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.92□□□□□ -1.94
TTC39AQ5SRH9 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
TTC39AQ5SRH9 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.92□□□□□ -1.94
TTC39AQ5SRH9 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
TTC39AQ5SRH9 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.91□□□□□ -1.94
TTC39AQ5SRH9 Y_RNA.48-201ENST00000362710 103 ntBASIC2.91□□□□□ -1.94
TTC39AQ5SRH9 RNU6-942P-201ENST00000363002 107 ntBASIC2.91□□□□□ -1.94
TTC39AQ5SRH9 RNU6-336P-201ENST00000364891 107 ntBASIC2.91□□□□□ -1.94
TTC39AQ5SRH9 MIR559-201ENST00000385188 96 ntBASIC2.91□□□□□ -1.94
TTC39AQ5SRH9 HMGN2P35-201ENST00000412164 270 ntBASIC2.91□□□□□ -1.94
TTC39AQ5SRH9 BPY2DP-201ENST00000422208 265 ntBASIC2.91□□□□□ -1.94
TTC39AQ5SRH9 AP000705.1-201ENST00000454567 350 ntBASIC2.91□□□□□ -1.94
TTC39AQ5SRH9 Y_RNA.631-201ENST00000459607 101 ntBASIC2.91□□□□□ -1.94
TTC39AQ5SRH9 FO393415.2-201ENST00000480085 343 ntBASIC2.91□□□□□ -1.94
TTC39AQ5SRH9 RPS27P26-201ENST00000494583 239 ntBASIC2.91□□□□□ -1.94
TTC39AQ5SRH9 RNA5SP24-201ENST00000516478 95 ntBASIC2.91□□□□□ -1.94
TTC39AQ5SRH9 AC109479.2-201ENST00000517842 174 ntBASIC2.91□□□□□ -1.94
TTC39AQ5SRH9 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.91□□□□□ -1.94
TTC39AQ5SRH9 CPDP1-201ENST00000579660 283 ntBASIC2.91□□□□□ -1.94
TTC39AQ5SRH9 SNRPGP17-201ENST00000603780 214 ntBASIC2.91□□□□□ -1.94
TTC39AQ5SRH9 AL359198.2-201ENST00000611836 194 ntBASIC2.91□□□□□ -1.94
TTC39AQ5SRH9 AC133104.2-201ENST00000615272 193 ntBASIC2.91□□□□□ -1.94
TTC39AQ5SRH9 MIR6134-201ENST00000617606 109 ntBASIC2.91□□□□□ -1.94
TTC39AQ5SRH9 SCARNA4-202ENST00000625402 129 ntBASIC2.91□□□□□ -1.94
TTC39AQ5SRH9 AC016717.2-201ENST00000609089 5141 ntBASIC2.91□□□□□ -1.94
TTC39AQ5SRH9 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
TTC39AQ5SRH9 MTND4P27-201ENST00000450813 1354 ntBASIC2.9□□□□□ -1.94
TTC39AQ5SRH9 ADAM3A-203ENST00000461344 2157 ntBASIC2.9□□□□□ -1.94
TTC39AQ5SRH9 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
TTC39AQ5SRH9 DEFA7P-201ENST00000382676 285 ntBASIC2.9□□□□□ -1.95
TTC39AQ5SRH9 MIR521-1-201ENST00000384902 87 ntBASIC2.9□□□□□ -1.95
TTC39AQ5SRH9 AL590004.1-201ENST00000405321 300 ntBASIC2.9□□□□□ -1.95
TTC39AQ5SRH9 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.9□□□□□ -1.95
TTC39AQ5SRH9 BX276092.3-201ENST00000424182 230 ntBASIC2.9□□□□□ -1.95
TTC39AQ5SRH9 USMG5P1-201ENST00000425964 177 ntBASIC2.9□□□□□ -1.95
TTC39AQ5SRH9 MTND3P9-201ENST00000429526 346 ntBASIC2.9□□□□□ -1.95
TTC39AQ5SRH9 RPL23AP50-201ENST00000434149 455 ntBASIC2.9□□□□□ -1.95
TTC39AQ5SRH9 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.9□□□□□ -1.95
TTC39AQ5SRH9 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.9□□□□□ -1.95
TTC39AQ5SRH9 RPS12P2-201ENST00000439728 269 ntBASIC2.9□□□□□ -1.95
TTC39AQ5SRH9 AL714022.1-201ENST00000439897 151 ntBASIC2.9□□□□□ -1.95
TTC39AQ5SRH9 AC013470.1-201ENST00000453438 462 ntBASIC2.9□□□□□ -1.95
TTC39AQ5SRH9 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.9□□□□□ -1.95
TTC39AQ5SRH9 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.9□□□□□ -1.95
TTC39AQ5SRH9 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.9□□□□□ -1.95
TTC39AQ5SRH9 AP004607.1-201ENST00000524456 203 ntBASIC2.9□□□□□ -1.95
TTC39AQ5SRH9 AC004486.1-201ENST00000546846 233 ntBASIC2.9□□□□□ -1.95
TTC39AQ5SRH9 AL442663.2-201ENST00000554385 511 ntBASIC2.9□□□□□ -1.95
TTC39AQ5SRH9 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.9□□□□□ -1.95
TTC39AQ5SRH9 MIR3670-2-201ENST00000582974 65 ntBASIC2.9□□□□□ -1.95
TTC39AQ5SRH9 MIR3670-1-201ENST00000584160 65 ntBASIC2.9□□□□□ -1.95
TTC39AQ5SRH9 MIR3670-3-201ENST00000584855 65 ntBASIC2.9□□□□□ -1.95
TTC39AQ5SRH9 Y_RNA.812-201ENST00000610788 101 ntBASIC2.9□□□□□ -1.95
TTC39AQ5SRH9 MIR3670-4-201ENST00000612260 65 ntBASIC2.9□□□□□ -1.95
TTC39AQ5SRH9 Y_RNA.784-201ENST00000613803 101 ntBASIC2.9□□□□□ -1.95
TTC39AQ5SRH9 Y_RNA.787-201ENST00000616522 101 ntBASIC2.9□□□□□ -1.95
TTC39AQ5SRH9 Y_RNA.780-201ENST00000617336 101 ntBASIC2.9□□□□□ -1.95
TTC39AQ5SRH9 Y_RNA.801-201ENST00000619005 101 ntBASIC2.9□□□□□ -1.95
TTC39AQ5SRH9 uc_338.22-201ENST00000622722 187 ntBASIC2.9□□□□□ -1.95
TTC39AQ5SRH9 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
TTC39AQ5SRH9 RNU6-527P-201ENST00000363425 104 ntBASIC2.89□□□□□ -1.95
TTC39AQ5SRH9 Y_RNA.395-201ENST00000383945 109 ntBASIC2.89□□□□□ -1.95
TTC39AQ5SRH9 RNU6-1040P-201ENST00000383974 107 ntBASIC2.89□□□□□ -1.95
TTC39AQ5SRH9 SNORA75.6-201ENST00000391318 127 ntBASIC2.89□□□□□ -1.95
TTC39AQ5SRH9 FTH1P15-201ENST00000406984 280 ntBASIC2.89□□□□□ -1.95
TTC39AQ5SRH9 AC243428.1-201ENST00000421099 264 ntBASIC2.89□□□□□ -1.95
TTC39AQ5SRH9 AL358075.3-201ENST00000426289 226 ntBASIC2.89□□□□□ -1.95
TTC39AQ5SRH9 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.89□□□□□ -1.95
TTC39AQ5SRH9 DAP3P1-201ENST00000441522 278 ntBASIC2.89□□□□□ -1.95
TTC39AQ5SRH9 HMGN2P10-201ENST00000448085 265 ntBASIC2.89□□□□□ -1.95
TTC39AQ5SRH9 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.89□□□□□ -1.95
TTC39AQ5SRH9 RNU6-612P-201ENST00000516909 102 ntBASIC2.89□□□□□ -1.95
TTC39AQ5SRH9 AC021739.1-201ENST00000559631 174 ntBASIC2.89□□□□□ -1.95
TTC39AQ5SRH9 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.89□□□□□ -1.95
TTC39AQ5SRH9 AC103810.1-201ENST00000579873 453 ntBASIC2.89□□□□□ -1.95
TTC39AQ5SRH9 SNORD53-201ENST00000579969 78 ntBASIC2.89□□□□□ -1.95
TTC39AQ5SRH9 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
TTC39AQ5SRH9 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 327.6 ms